RNA–Protein interactions for RNA: ENST00000622892.4

PSME3-217, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-217ENST00000622892 ADAMTSL3P82987 1691 aa16.07■□□□□ 0.16
PSME3-217ENST00000622892 ARHGAP23Q9P227 1491 aa16.07■□□□□ 0.16
PSME3-217ENST00000622892 CDC45O75419 566 aa16.07■□□□□ 0.16
PSME3-217ENST00000622892 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.07■□□□□ 0.16
PSME3-217ENST00000622892 SLIT1O75093 1534 aa16.07■□□□□ 0.16
PSME3-217ENST00000622892 CCDC173Q0VFZ6 552 aa16.06■□□□□ 0.16
PSME3-217ENST00000622892 ESCO1Q5FWF5 840 aa16.06■□□□□ 0.16
PSME3-217ENST00000622892 COG3Q96JB2 828 aa16.06■□□□□ 0.16
PSME3-217ENST00000622892 KLHL40Q2TBA0 621 aa16.06■□□□□ 0.16
PSME3-217ENST00000622892 FOXD4L5Q5VV16 416 aaPredicted RBP16.06■□□□□ 0.16
PSME3-217ENST00000622892 FOXD4L4Q8WXT5 416 aaPredicted RBP16.06■□□□□ 0.16
PSME3-217ENST00000622892 PROSER2Q86WR7 435 aaPredicted RBP16.06■□□□□ 0.16
PSME3-217ENST00000622892 OTUD7AQ8TE49 926 aaPredicted RBP16.06■□□□□ 0.16
PSME3-217ENST00000622892 FCHSD2O94868 740 aa16.05■□□□□ 0.16
PSME3-217ENST00000622892 RBM10P98175 930 aaKnown RBP16.05■□□□□ 0.16
PSME3-217ENST00000622892 CALD1Q05682 793 aaKnown RBP16.04■□□□□ 0.16
PSME3-217ENST00000622892 ZSCAN30Q86W11 494 aa16.04■□□□□ 0.16
PSME3-217ENST00000622892 KDM4FA0A1W2PPD8 638 aa16.04■□□□□ 0.16
PSME3-217ENST00000622892 MSNP26038 577 aaKnown RBP16.04■□□□□ 0.16
PSME3-217ENST00000622892 PLEKHM2Q8IWE5 1019 aa16.04■□□□□ 0.16
PSME3-217ENST00000622892 C8orf58Q8NAV2 365 aa16.04■□□□□ 0.16
PSME3-217ENST00000622892 MBIPQ9NS73 344 aa16.04■□□□□ 0.16
PSME3-217ENST00000622892 RBM27Q9P2N5 1060 aaKnown RBP16.04■□□□□ 0.16
PSME3-217ENST00000622892 DLC1Q96QB1 1528 aa16.04■□□□□ 0.16
PSME3-217ENST00000622892 FAM135BQ49AJ0 1406 aa16.04■□□□□ 0.16
PSME3-217ENST00000622892 PUS7Q96PZ0 661 aaKnown RBP16.03■□□□□ 0.16
PSME3-217ENST00000622892 FAM83GA6ND36 823 aa16.03■□□□□ 0.16
PSME3-217ENST00000622892 PTMSP20962 102 aa16.03■□□□□ 0.16
PSME3-217ENST00000622892 DCTN1Q14203 1278 aa16.03■□□□□ 0.16
PSME3-217ENST00000622892 ZGPATQ8N5A5 531 aaKnown RBP16.03■□□□□ 0.16
PSME3-217ENST00000622892 DDX17Q92841 729 aaKnown RBP16.03■□□□□ 0.16
PSME3-217ENST00000622892 PPP1R9BQ96SB3 815 aa16.03■□□□□ 0.16
PSME3-217ENST00000622892 PRPF40AO75400 957 aaKnown RBP16.03■□□□□ 0.16
PSME3-217ENST00000622892 TWISTNBQ3B726 338 aaPredicted RBP16.03■□□□□ 0.16
PSME3-217ENST00000622892 COL3A1P02461 1466 aaPredicted RBP16.03■□□□□ 0.16
PSME3-217ENST00000622892 ATP7BP35670 1465 aa16.03■□□□□ 0.16
PSME3-217ENST00000622892 SETD1BQ9UPS6 1966 aaKnown RBP16.02■□□□□ 0.16
PSME3-217ENST00000622892 SMARCA5O60264 1052 aaPredicted RBP16.02■□□□□ 0.15
PSME3-217ENST00000622892 ZSCAN23Q3MJ62 389 aa16.02■□□□□ 0.15
PSME3-217ENST00000622892 ORAI2Q96SN7 254 aa16.02■□□□□ 0.15
PSME3-217ENST00000622892 RBSNQ9H1K0 784 aa16.02■□□□□ 0.15
PSME3-217ENST00000622892 POLKQ9UBT6 870 aa16.02■□□□□ 0.15
PSME3-217ENST00000622892 CPS1P31327 1500 aa16.02■□□□□ 0.15
PSME3-217ENST00000622892 FOXO3O43524 673 aa16.01■□□□□ 0.15
PSME3-217ENST00000622892 NPHP4O75161 1426 aaPredicted RBP16.01■□□□□ 0.15
PSME3-217ENST00000622892 NFE2L2Q16236 605 aa16.01■□□□□ 0.15
PSME3-217ENST00000622892 LTV1Q96GA3 475 aaPredicted RBP16.01■□□□□ 0.15
PSME3-217ENST00000622892 TECPR2O15040 1411 aa16.01■□□□□ 0.15
PSME3-217ENST00000622892 MED14O60244 1454 aa16.01■□□□□ 0.15
PSME3-217ENST00000622892 PRIM1P49642 420 aaKnown RBP16.01■□□□□ 0.15
PSME3-217ENST00000622892 LMBRD1Q9NUN5 540 aa16.01■□□□□ 0.15
PSME3-217ENST00000622892 USP32Q8NFA0 1604 aa16.01■□□□□ 0.15
PSME3-217ENST00000622892 RABEP1Q15276 862 aa16■□□□□ 0.15
PSME3-217ENST00000622892 R3HCC1Q9Y3T6 440 aaKnown RBP16■□□□□ 0.15
PSME3-217ENST00000622892 TTC21BQ7Z4L5 1316 aa16■□□□□ 0.15
PSME3-217ENST00000622892 TPM2P07951 284 aa16■□□□□ 0.15
PSME3-217ENST00000622892 NLRP6P59044 892 aa16■□□□□ 0.15
PSME3-217ENST00000622892 USP26Q9BXU7 913 aa16■□□□□ 0.15
PSME3-217ENST00000622892 RGPD8O14715 1765 aaPredicted RBP15.99■□□□□ 0.15
PSME3-217ENST00000622892 KRT24Q2M2I5 525 aa15.99■□□□□ 0.15
PSME3-217ENST00000622892 CHMP4BQ9H444 224 aaKnown RBP15.99■□□□□ 0.15
PSME3-217ENST00000622892 GNAI1P63096 354 aa15.99■□□□□ 0.15
PSME3-217ENST00000622892 ARHGAP45Q92619 1136 aa15.99■□□□□ 0.15
PSME3-217ENST00000622892 ARID3AQ99856 593 aa15.99■□□□□ 0.15
PSME3-217ENST00000622892 ABTB2Q8N961 1025 aa15.98■□□□□ 0.15
PSME3-217ENST00000622892 OFD1O75665 1012 aa15.98■□□□□ 0.15
PSME3-217ENST00000622892 BRPF1P55201 1214 aaPredicted RBP15.98■□□□□ 0.15
PSME3-217ENST00000622892 NUCB2P80303 420 aa15.98■□□□□ 0.15
PSME3-217ENST00000622892 TTC22Q5TAA0 569 aa15.98■□□□□ 0.15
PSME3-217ENST00000622892 CLEC17AQ6ZS10 378 aa15.98■□□□□ 0.15
PSME3-217ENST00000622892 ABCC4O15439 1325 aa15.97■□□□□ 0.15
PSME3-217ENST00000622892 ZNF428Q96B54 188 aa15.97■□□□□ 0.15
PSME3-217ENST00000622892 FAM13BQ9NYF5 915 aa15.97■□□□□ 0.15
PSME3-217ENST00000622892 SDSP20132 328 aa15.97■□□□□ 0.15
PSME3-217ENST00000622892 GPT2Q8TD30 523 aa15.97■□□□□ 0.15
PSME3-217ENST00000622892 SIRT1Q96EB6 747 aa15.97■□□□□ 0.15
PSME3-217ENST00000622892 DCTPP1Q9H773 170 aa15.97■□□□□ 0.15
PSME3-217ENST00000622892 NSFL1CQ9UNZ2 370 aaKnown RBP15.97■□□□□ 0.15
PSME3-217ENST00000622892 ZNF445P59923 1031 aa15.96■□□□□ 0.15
PSME3-217ENST00000622892 PSME1Q06323 249 aa15.96■□□□□ 0.15
PSME3-217ENST00000622892 RNF214Q8ND24 703 aa15.96■□□□□ 0.15
PSME3-217ENST00000622892 PNPLA6Q8IY17 1366 aa15.96■□□□□ 0.15
PSME3-217ENST00000622892 FOXD4L6Q3SYB3 417 aaPredicted RBP15.96■□□□□ 0.15
PSME3-217ENST00000622892 HSP90AB2PQ58FF8 381 aa15.96■□□□□ 0.15
PSME3-217ENST00000622892 FOXD4L3Q6VB84 417 aaPredicted RBP15.96■□□□□ 0.15
PSME3-217ENST00000622892 EDC4Q6P2E9 1401 aaKnown RBP15.96■□□□□ 0.14
PSME3-217ENST00000622892 ZDHHC9Q9Y397 364 aa15.95■□□□□ 0.14
PSME3-217ENST00000622892 CPSF1Q10570 1443 aaKnown RBP15.95■□□□□ 0.14
PSME3-217ENST00000622892 SYCE3A1L190 88 aa15.95■□□□□ 0.14
PSME3-217ENST00000622892 NOL8Q76FK4 1167 aaKnown RBP15.95■□□□□ 0.14
PSME3-217ENST00000622892 API5Q9BZZ5 524 aaKnown RBP15.95■□□□□ 0.14
PSME3-217ENST00000622892 IFT57Q9NWB7 429 aa15.95■□□□□ 0.14
PSME3-217ENST00000622892 PHF8Q9UPP1 1060 aa15.95■□□□□ 0.14
PSME3-217ENST00000622892 DIP2AQ14689 1571 aa15.95■□□□□ 0.14
PSME3-217ENST00000622892 LRRC7Q96NW7 1537 aa15.95■□□□□ 0.14
PSME3-217ENST00000622892 INTS3Q68E01 1043 aaKnown RBP15.95■□□□□ 0.14
PSME3-217ENST00000622892 CYP2E1P05181 493 aaPredicted RBP15.94■□□□□ 0.14
PSME3-217ENST00000622892 PDCL3Q9H2J4 239 aa15.94■□□□□ 0.14
PSME3-217ENST00000622892 KNDC1Q76NI1 1749 aa15.94■□□□□ 0.14
PSME3-217ENST00000622892 TPRNQ4KMQ1 711 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms