RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 CFAP44Q96MT7 982 aa15.8■□□□□ 0.12
SCAMP1-207ENST00000621999 GTF2E1P29083 439 aaPredicted RBP15.8■□□□□ 0.12
SCAMP1-207ENST00000621999 AKAP4Q5JQC9 854 aa15.8■□□□□ 0.12
SCAMP1-207ENST00000621999 ERICH6Q7L0X2 663 aa15.8■□□□□ 0.12
SCAMP1-207ENST00000621999 API5Q9BZZ5 524 aaKnown RBP15.8■□□□□ 0.12
SCAMP1-207ENST00000621999 MED14O60244 1454 aa15.8■□□□□ 0.12
SCAMP1-207ENST00000621999 KIF16BQ96L93 1317 aa15.8■□□□□ 0.12
SCAMP1-207ENST00000621999 SLC39A6Q13433 755 aa15.8■□□□□ 0.12
SCAMP1-207ENST00000621999 FAM98CQ17RN3 349 aaKnown RBP15.8■□□□□ 0.12
SCAMP1-207ENST00000621999 MBIPQ9NS73 344 aa15.79■□□□□ 0.12
SCAMP1-207ENST00000621999 CPS1P31327 1500 aa15.79■□□□□ 0.12
SCAMP1-207ENST00000621999 NEXNQ0ZGT2 675 aa15.79■□□□□ 0.12
SCAMP1-207ENST00000621999 RIC3Q7Z5B4 369 aa15.79■□□□□ 0.12
SCAMP1-207ENST00000621999 DDX58O95786 925 aaKnown RBP15.79■□□□□ 0.12
SCAMP1-207ENST00000621999 NFATC2IPQ8NCF5 419 aa15.78■□□□□ 0.12
SCAMP1-207ENST00000621999 IFT172Q9UG01 1749 aa15.78■□□□□ 0.12
SCAMP1-207ENST00000621999 NOB1Q9ULX3 412 aaKnown RBP15.78■□□□□ 0.12
SCAMP1-207ENST00000621999 TNS3Q68CZ2 1445 aa15.78■□□□□ 0.12
SCAMP1-207ENST00000621999 C9orf78Q9NZ63 289 aaPredicted RBP15.77■□□□□ 0.11
SCAMP1-207ENST00000621999 CDC42BPGQ6DT37 1551 aa15.76■□□□□ 0.11
SCAMP1-207ENST00000621999 ERBB3P21860 1342 aa15.76■□□□□ 0.11
SCAMP1-207ENST00000621999 LGR6Q9HBX8 967 aa15.76■□□□□ 0.11
SCAMP1-207ENST00000621999 MST1RQ04912 1400 aa15.76■□□□□ 0.11
SCAMP1-207ENST00000621999 HSPA1LP34931 641 aa15.76■□□□□ 0.11
SCAMP1-207ENST00000621999 SPINK5Q9NQ38 1064 aaPredicted RBP15.75■□□□□ 0.11
SCAMP1-207ENST00000621999 SSH1Q8WYL5 1049 aa15.75■□□□□ 0.11
SCAMP1-207ENST00000621999 NCOA3Q9Y6Q9 1424 aa15.75■□□□□ 0.11
SCAMP1-207ENST00000621999 KRT24Q2M2I5 525 aa15.75■□□□□ 0.11
SCAMP1-207ENST00000621999 RWDD1Q9H446 243 aaPredicted RBP15.74■□□□□ 0.11
SCAMP1-207ENST00000621999 CCDC27Q2M243 656 aa15.74■□□□□ 0.11
SCAMP1-207ENST00000621999 MAP3K5Q99683 1374 aa15.74■□□□□ 0.11
SCAMP1-207ENST00000621999 TRIM35Q9UPQ4 493 aa15.73■□□□□ 0.11
SCAMP1-207ENST00000621999 USP31Q70CQ4 1352 aa15.73■□□□□ 0.11
SCAMP1-207ENST00000621999 FAM177BA6PVY3 158 aa15.73■□□□□ 0.11
SCAMP1-207ENST00000621999 DDX19BQ9UMR2 479 aa15.73■□□□□ 0.11
SCAMP1-207ENST00000621999 RNMTO43148 476 aaKnown RBP15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 RARSP54136 660 aaKnown RBP15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 DCAF5Q96JK2 942 aa15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 LRRC7Q96NW7 1537 aa15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 SOS2Q07890 1332 aaPredicted RBP15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 WDR17Q8IZU2 1322 aa15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 IGSF1Q8N6C5 1336 aa15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 ANXA1P04083 346 aa15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 CT47B1P0C2W7 299 aaPredicted RBP15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 SF3B2Q13435 895 aaKnown RBP15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 FMNL2Q96PY5 1086 aa15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 RTL5Q5HYW3 569 aaPredicted RBP15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 C8orf58Q8NAV2 365 aa15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 PCDH11XQ9BZA7 1347 aa15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 PCDH11YQ9BZA8 1340 aa15.72■□□□□ 0.11
SCAMP1-207ENST00000621999 HTATSF1O43719 755 aaKnown RBP15.71■□□□□ 0.11
SCAMP1-207ENST00000621999 DCCP43146 1447 aa15.71■□□□□ 0.11
SCAMP1-207ENST00000621999 IL16Q14005 1332 aa15.7■□□□□ 0.1
SCAMP1-207ENST00000621999 TAF7LQ5H9L4 462 aa15.7■□□□□ 0.1
SCAMP1-207ENST00000621999 HDAC5Q9UQL6 1122 aa15.7■□□□□ 0.1
SCAMP1-207ENST00000621999 ATF7IPQ6VMQ6 1270 aa15.7■□□□□ 0.1
SCAMP1-207ENST00000621999 CARD10Q9BWT7 1032 aa15.7■□□□□ 0.1
SCAMP1-207ENST00000621999 RTL1A6NKG5 1358 aa15.7■□□□□ 0.1
SCAMP1-207ENST00000621999 STARD3NLO95772 234 aa15.7■□□□□ 0.1
SCAMP1-207ENST00000621999 ERICH6BQ5W0A0 696 aa15.7■□□□□ 0.1
SCAMP1-207ENST00000621999 TSPYL6Q8N831 410 aa15.7■□□□□ 0.1
SCAMP1-207ENST00000621999 PLEKHF1Q96S99 279 aa15.7■□□□□ 0.1
SCAMP1-207ENST00000621999 NRXN3Q9Y4C0 1643 aa15.69■□□□□ 0.1
SCAMP1-207ENST00000621999 QTRT2Q9H974 415 aaKnown RBP15.69■□□□□ 0.1
SCAMP1-207ENST00000621999 HMMRO75330 724 aa15.69■□□□□ 0.1
SCAMP1-207ENST00000621999 CD163L1Q9NR16 1453 aa15.69■□□□□ 0.1
SCAMP1-207ENST00000621999 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.68■□□□□ 0.1
SCAMP1-207ENST00000621999 CDK12Q9NYV4 1490 aaPredicted RBP15.68■□□□□ 0.1
SCAMP1-207ENST00000621999 PIP4K2AP48426 406 aaPredicted RBP15.68■□□□□ 0.1
SCAMP1-207ENST00000621999 IL17REQ8NFR9 667 aa15.68■□□□□ 0.1
SCAMP1-207ENST00000621999 CDCA7Q9BWT1 371 aaPredicted RBP15.68■□□□□ 0.1
SCAMP1-207ENST00000621999 KIF24Q5T7B8 1368 aa15.67■□□□□ 0.1
SCAMP1-207ENST00000621999 OVOS2A0A0J9YW53 1432 aa15.67■□□□□ 0.1
SCAMP1-207ENST00000621999 OVOS2Q6IE36 1432 aa15.67■□□□□ 0.1
SCAMP1-207ENST00000621999 KIF6Q6ZMV9 814 aa15.67■□□□□ 0.1
SCAMP1-207ENST00000621999 PRIM1P49642 420 aaKnown RBP15.67■□□□□ 0.1
SCAMP1-207ENST00000621999 F6X3S4 739 aa15.67■□□□□ 0.1
SCAMP1-207ENST00000621999 FAM182BQ5T319 152 aa15.67■□□□□ 0.1
SCAMP1-207ENST00000621999 C1orf115Q9H7X2 142 aa15.66■□□□□ 0.1
SCAMP1-207ENST00000621999 JCADQ9P266 1359 aa15.66■□□□□ 0.1
SCAMP1-207ENST00000621999 SNRPA1P09661 255 aaKnown RBP15.66■□□□□ 0.1
SCAMP1-207ENST00000621999 C20orf194Q5TEA3 1177 aa15.66■□□□□ 0.1
SCAMP1-207ENST00000621999 PHKG2P15735 406 aa15.66■□□□□ 0.1
SCAMP1-207ENST00000621999 UNC5CLQ8IV45 518 aa15.66■□□□□ 0.1
SCAMP1-207ENST00000621999 UPF2Q9HAU5 1272 aaKnown RBP15.65■□□□□ 0.1
SCAMP1-207ENST00000621999 DBF4Q9UBU7 674 aaPredicted RBP15.65■□□□□ 0.1
SCAMP1-207ENST00000621999 UBTFL1P0CB47 393 aaPredicted RBP15.65■□□□□ 0.1
SCAMP1-207ENST00000621999 PDE3AQ14432 1141 aa15.65■□□□□ 0.1
SCAMP1-207ENST00000621999 TRPC5Q9UL62 973 aaPredicted RBP15.64■□□□□ 0.09
SCAMP1-207ENST00000621999 BLMP54132 1417 aaPredicted RBP15.64■□□□□ 0.09
SCAMP1-207ENST00000621999 ALDH1L2Q3SY69 923 aa15.63■□□□□ 0.09
SCAMP1-207ENST00000621999 SRCIN1Q9C0H9 1055 aa15.63■□□□□ 0.09
SCAMP1-207ENST00000621999 ZNF790Q6PG37 636 aa15.63■□□□□ 0.09
SCAMP1-207ENST00000621999 AFF2P51816 1311 aa15.63■□□□□ 0.09
SCAMP1-207ENST00000621999 TMEM57Q8N5G2 664 aa15.63■□□□□ 0.09
SCAMP1-207ENST00000621999 SLC52A2Q9HAB3 445 aa15.63■□□□□ 0.09
SCAMP1-207ENST00000621999 ATP6V1AP38606 617 aa15.62■□□□□ 0.09
SCAMP1-207ENST00000621999 CHPF2Q9P2E5 772 aa15.62■□□□□ 0.09
SCAMP1-207ENST00000621999 ITSN1Q15811 1721 aa15.62■□□□□ 0.09
SCAMP1-207ENST00000621999 USP19O94966 1318 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms