RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 MICALL2Q8IY33 904 aa8.14□□□□□ -1.11
CBWD3-215ENST00000619322 CDCA7Q9BWT1 371 aaPredicted RBP8.14□□□□□ -1.11
CBWD3-215ENST00000619322 TIMELESSQ9UNS1 1208 aa8.14□□□□□ -1.11
CBWD3-215ENST00000619322 OVOS2A0A0G2JMS6 1433 aa8.14□□□□□ -1.11
CBWD3-215ENST00000619322 SCN7AQ01118 1682 aa8.14□□□□□ -1.11
CBWD3-215ENST00000619322 CCDC7Q96M83 1385 aa8.14□□□□□ -1.11
CBWD3-215ENST00000619322 EDC4Q6P2E9 1401 aaKnown RBP8.13□□□□□ -1.11
CBWD3-215ENST00000619322 PLCG2P16885 1265 aa8.13□□□□□ -1.11
CBWD3-215ENST00000619322 CRB1P82279 1406 aa8.13□□□□□ -1.11
CBWD3-215ENST00000619322 TJP1Q07157 1748 aa8.13□□□□□ -1.11
CBWD3-215ENST00000619322 SLC39A7Q92504 469 aa8.13□□□□□ -1.11
CBWD3-215ENST00000619322 SPATA31A5Q5VU36 1347 aa8.13□□□□□ -1.11
CBWD3-215ENST00000619322 SPATA31A7Q8IWB4 1347 aa8.13□□□□□ -1.11
CBWD3-215ENST00000619322 RAB3GAP2Q9H2M9 1393 aa8.12□□□□□ -1.11
CBWD3-215ENST00000619322 SOX12O15370 315 aa8.12□□□□□ -1.11
CBWD3-215ENST00000619322 OTUD5Q96G74 571 aa8.12□□□□□ -1.11
CBWD3-215ENST00000619322 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.12□□□□□ -1.11
CBWD3-215ENST00000619322 C7P10643 843 aa8.11□□□□□ -1.11
CBWD3-215ENST00000619322 NLRP6P59044 892 aa8.11□□□□□ -1.11
CBWD3-215ENST00000619322 UNC5CLQ8IV45 518 aa8.11□□□□□ -1.11
CBWD3-215ENST00000619322 AFF2P51816 1311 aa8.11□□□□□ -1.11
CBWD3-215ENST00000619322 RXRBP28702 533 aa8.11□□□□□ -1.11
CBWD3-215ENST00000619322 MPHOSPH9Q99550 1183 aa8.11□□□□□ -1.11
CBWD3-215ENST00000619322 DICER1Q9UPY3 1922 aaKnown RBP8.1□□□□□ -1.11
CBWD3-215ENST00000619322 LOC105371045A0A1W2PR82 267 aa8.09□□□□□ -1.11
CBWD3-215ENST00000619322 CLCN6P51797 869 aa8.09□□□□□ -1.11
CBWD3-215ENST00000619322 BOLA1Q9Y3E2 137 aa8.09□□□□□ -1.11
CBWD3-215ENST00000619322 IER5LQ5T953 404 aa8.09□□□□□ -1.11
CBWD3-215ENST00000619322 LAMB2P55268 1798 aa8.09□□□□□ -1.11
CBWD3-215ENST00000619322 TAOK2Q9UL54 1235 aa8.08□□□□□ -1.12
CBWD3-215ENST00000619322 KIAA0232Q92628 1395 aa8.08□□□□□ -1.12
CBWD3-215ENST00000619322 NSD3Q9BZ95 1437 aa8.08□□□□□ -1.12
CBWD3-215ENST00000619322 INSRP06213 1382 aa8.08□□□□□ -1.12
CBWD3-215ENST00000619322 ADGRF5Q8IZF2 1346 aa8.07□□□□□ -1.12
CBWD3-215ENST00000619322 MYT1LQ9UL68 1186 aa8.07□□□□□ -1.12
CBWD3-215ENST00000619322 RGPD2P0DJD1 1756 aa8.07□□□□□ -1.12
CBWD3-215ENST00000619322 PLEKHH1Q9ULM0 1364 aa8.06□□□□□ -1.12
CBWD3-215ENST00000619322 C2orf72A6NCS6 295 aa8.06□□□□□ -1.12
CBWD3-215ENST00000619322 TMEM121BQ9BXQ6 578 aaPredicted RBP8.06□□□□□ -1.12
CBWD3-215ENST00000619322 ATP1B4Q9UN42 357 aaPredicted RBP8.06□□□□□ -1.12
CBWD3-215ENST00000619322 CGNL1Q0VF96 1302 aa8.06□□□□□ -1.12
CBWD3-215ENST00000619322 DDX60Q8IY21 1712 aaKnown RBP8.06□□□□□ -1.12
CBWD3-215ENST00000619322 GJD4Q96KN9 370 aaPredicted RBP8.06□□□□□ -1.12
CBWD3-215ENST00000619322 PPIP5K1Q6PFW1 1433 aa8.06□□□□□ -1.12
CBWD3-215ENST00000619322 SPATA31A1Q5TZJ5 1347 aa8.06□□□□□ -1.12
CBWD3-215ENST00000619322 PCGF6Q9BYE7 350 aa8.05□□□□□ -1.12
CBWD3-215ENST00000619322 NPC1L1Q9UHC9 1359 aa8.04□□□□□ -1.12
CBWD3-215ENST00000619322 WASLO00401 505 aaPredicted RBP8.04□□□□□ -1.12
CBWD3-215ENST00000619322 MAP3K19Q56UN5 1328 aa8.04□□□□□ -1.12
CBWD3-215ENST00000619322 PLSCR1O15162 318 aa8.03□□□□□ -1.12
CBWD3-215ENST00000619322 DSG2Q14126 1118 aa8.03□□□□□ -1.12
CBWD3-215ENST00000619322 LHX8Q68G74 356 aa8.03□□□□□ -1.12
CBWD3-215ENST00000619322 LRRC37AA6NMS7 1700 aa8.03□□□□□ -1.12
CBWD3-215ENST00000619322 PRR36Q9H6K5 1346 aa8.02□□□□□ -1.13
CBWD3-215ENST00000619322 PXDNLA1KZ92 1463 aa8.02□□□□□ -1.13
CBWD3-215ENST00000619322 KDM3BQ7LBC6 1761 aa8.02□□□□□ -1.13
CBWD3-215ENST00000619322 N4BP2Q86UW6 1770 aaPredicted RBP8.02□□□□□ -1.13
CBWD3-215ENST00000619322 ADAMTSL1Q8N6G6 1762 aa8.02□□□□□ -1.13
CBWD3-215ENST00000619322 KDRP35968 1356 aa8.01□□□□□ -1.13
CBWD3-215ENST00000619322 TONSLQ96HA7 1378 aa8.01□□□□□ -1.13
CBWD3-215ENST00000619322 LARP6Q9BRS8 491 aaKnown RBP8.01□□□□□ -1.13
CBWD3-215ENST00000619322 SLC26A8Q96RN1 970 aa8.01□□□□□ -1.13
CBWD3-215ENST00000619322 CRISPLD2Q9H0B8 497 aa8□□□□□ -1.13
CBWD3-215ENST00000619322 RIC1Q4ADV7 1423 aa8□□□□□ -1.13
CBWD3-215ENST00000619322 KIF3CO14782 793 aa8□□□□□ -1.13
CBWD3-215ENST00000619322 KHSRPQ92945 711 aaKnown RBP eCLIP8□□□□□ -1.13
CBWD3-215ENST00000619322 WDR90Q96KV7 1748 aa8□□□□□ -1.13
CBWD3-215ENST00000619322 ADCY9O60503 1353 aa8□□□□□ -1.13
CBWD3-215ENST00000619322 ANKRD36BQ8N2N9 1353 aa7.98□□□□□ -1.13
CBWD3-215ENST00000619322 ANKRD36CQ5JPF3 1778 aa7.98□□□□□ -1.13
CBWD3-215ENST00000619322 EMILIN3Q9NT22 766 aa7.98□□□□□ -1.13
CBWD3-215ENST00000619322 PSME4Q14997 1843 aa7.97□□□□□ -1.13
CBWD3-215ENST00000619322 KCNV2Q8TDN2 545 aa7.97□□□□□ -1.13
CBWD3-215ENST00000619322 SLAIN1Q8ND83 568 aa7.97□□□□□ -1.13
CBWD3-215ENST00000619322 TIAM2Q8IVF5 1701 aa7.97□□□□□ -1.13
CBWD3-215ENST00000619322 CAMKK2Q96RR4 588 aa7.96□□□□□ -1.13
CBWD3-215ENST00000619322 C3orf67Q6ZVT6 689 aa7.96□□□□□ -1.14
CBWD3-215ENST00000619322 USP21Q9UK80 565 aa7.96□□□□□ -1.14
CBWD3-215ENST00000619322 TRIM26Q12899 539 aaPredicted RBP7.96□□□□□ -1.14
CBWD3-215ENST00000619322 LCE2DQ5TA82 110 aaPredicted RBP7.96□□□□□ -1.14
CBWD3-215ENST00000619322 KCNH5Q8NCM2 988 aa7.96□□□□□ -1.14
CBWD3-215ENST00000619322 KDM6AO15550 1401 aaPredicted RBP7.95□□□□□ -1.14
CBWD3-215ENST00000619322 ZNF646O15015 1829 aaPredicted RBP7.95□□□□□ -1.14
CBWD3-215ENST00000619322 KRT28Q7Z3Y7 464 aa7.95□□□□□ -1.14
CBWD3-215ENST00000619322 QTRT2Q9H974 415 aaKnown RBP7.95□□□□□ -1.14
CBWD3-215ENST00000619322 WDR17Q8IZU2 1322 aa7.94□□□□□ -1.14
CBWD3-215ENST00000619322 FAM50AQ14320 339 aaKnown RBP7.94□□□□□ -1.14
CBWD3-215ENST00000619322 FAM196AQ6ZSG2 479 aa7.94□□□□□ -1.14
CBWD3-215ENST00000619322 GPHNQ9NQX3 736 aaPredicted RBP7.94□□□□□ -1.14
CBWD3-215ENST00000619322 CARD10Q9BWT7 1032 aa7.93□□□□□ -1.14
CBWD3-215ENST00000619322 COL3A1P02461 1466 aaPredicted RBP7.93□□□□□ -1.14
CBWD3-215ENST00000619322 SBF1O95248 1867 aa7.92□□□□□ -1.14
CBWD3-215ENST00000619322 HOXB3P14651 431 aaPredicted RBP7.92□□□□□ -1.14
CBWD3-215ENST00000619322 FER1L6Q2WGJ9 1857 aa7.92□□□□□ -1.14
CBWD3-215ENST00000619322 ZNF609O15014 1411 aa7.92□□□□□ -1.14
CBWD3-215ENST00000619322 A0A1W2PP64 1363 aa7.92□□□□□ -1.14
CBWD3-215ENST00000619322 IBTKQ9P2D0 1353 aaPredicted RBP7.92□□□□□ -1.14
CBWD3-215ENST00000619322 PIP4K2BP78356 416 aa7.92□□□□□ -1.14
CBWD3-215ENST00000619322 RBBP6Q7Z6E9 1792 aaKnown RBP7.92□□□□□ -1.14
CBWD3-215ENST00000619322 CENPJQ9HC77 1338 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms