RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 Q6ZNB5 142 aa5.55□□□□□ -1.52
SEC22B-202ENST00000618538 PHF8Q9UPP1 1060 aa5.55□□□□□ -1.52
SEC22B-202ENST00000618538 NRXN3Q9Y4C0 1643 aa5.54□□□□□ -1.52
SEC22B-202ENST00000618538 RIOK3O14730 519 aaKnown RBP5.54□□□□□ -1.52
SEC22B-202ENST00000618538 FRAT2O75474 233 aaPredicted RBP5.54□□□□□ -1.52
SEC22B-202ENST00000618538 TRIM27P14373 513 aa5.54□□□□□ -1.52
SEC22B-202ENST00000618538 SRPK2P78362 688 aaKnown RBP5.54□□□□□ -1.52
SEC22B-202ENST00000618538 MVPQ14764 893 aaKnown RBP5.54□□□□□ -1.52
SEC22B-202ENST00000618538 SSH1Q8WYL5 1049 aa5.54□□□□□ -1.52
SEC22B-202ENST00000618538 CFAP53Q96M91 514 aa5.54□□□□□ -1.52
SEC22B-202ENST00000618538 MAPK8IP3Q9UPT6 1336 aa5.54□□□□□ -1.52
SEC22B-202ENST00000618538 U2SURPO15042 1029 aaKnown RBP5.54□□□□□ -1.52
SEC22B-202ENST00000618538 SLC52A1Q9NWF4 448 aa5.54□□□□□ -1.52
SEC22B-202ENST00000618538 A2ML1A8K2U0 1454 aa5.53□□□□□ -1.52
SEC22B-202ENST00000618538 ATAD2Q6PL18 1390 aa5.53□□□□□ -1.52
SEC22B-202ENST00000618538 TMC2Q8TDI7 906 aa5.53□□□□□ -1.52
SEC22B-202ENST00000618538 MYH16Q9H6N6 1097 aa5.53□□□□□ -1.52
SEC22B-202ENST00000618538 FAM135BQ49AJ0 1406 aa5.53□□□□□ -1.52
SEC22B-202ENST00000618538 C2orf72A6NCS6 295 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 TBC1D12O60347 775 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 WAPLQ7Z5K2 1190 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 CDK19Q9BWU1 502 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 ANTXR1Q9H6X2 564 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 CABP1Q9NZU7 370 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 ZMYM3Q14202 1370 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 SPATA31D1Q6ZQQ2 1576 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 DIP2BQ9P265 1576 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 DLC1Q96QB1 1528 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 KDM4FA0A1W2PPD8 638 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 DMRTA1Q5VZB9 504 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 ZKSCAN2Q63HK3 967 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 THSD4Q6ZMP0 1018 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 DZIP1LQ8IYY4 767 aaKnown RBP5.52□□□□□ -1.53
SEC22B-202ENST00000618538 PMFBP1Q8TBY8 1022 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 PTCD2Q8WV60 388 aaKnown RBP5.52□□□□□ -1.53
SEC22B-202ENST00000618538 TBC1D32Q96NH3 1257 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 BRPF3Q9ULD4 1205 aa5.52□□□□□ -1.53
SEC22B-202ENST00000618538 CPS1P31327 1500 aa5.51□□□□□ -1.53
SEC22B-202ENST00000618538 NCKAP5LQ9HCH0 1330 aa5.51□□□□□ -1.53
SEC22B-202ENST00000618538 TMEM57Q8N5G2 664 aa5.51□□□□□ -1.53
SEC22B-202ENST00000618538 PHACTR3Q96KR7 559 aa5.51□□□□□ -1.53
SEC22B-202ENST00000618538 THUMPD2Q9BTF0 503 aaKnown RBP5.51□□□□□ -1.53
SEC22B-202ENST00000618538 RSPH6AQ9H0K4 717 aa5.51□□□□□ -1.53
SEC22B-202ENST00000618538 SMC4Q9NTJ3 1288 aa5.51□□□□□ -1.53
SEC22B-202ENST00000618538 POLKQ9UBT6 870 aa5.51□□□□□ -1.53
SEC22B-202ENST00000618538 NOB1Q9ULX3 412 aaKnown RBP5.51□□□□□ -1.53
SEC22B-202ENST00000618538 ITGBL1O95965 494 aaPredicted RBP5.51□□□□□ -1.53
SEC22B-202ENST00000618538 RIPK4P57078 832 aa5.51□□□□□ -1.53
SEC22B-202ENST00000618538 ATF7IPQ6VMQ6 1270 aa5.51□□□□□ -1.53
SEC22B-202ENST00000618538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.51□□□□□ -1.53
SEC22B-202ENST00000618538 POGKQ9P215 609 aa5.51□□□□□ -1.53
SEC22B-202ENST00000618538 CPSF1Q10570 1443 aaKnown RBP5.51□□□□□ -1.53
SEC22B-202ENST00000618538 REREQ9P2R6 1566 aa5.51□□□□□ -1.53
SEC22B-202ENST00000618538 METP08581 1390 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 ATP7BP35670 1465 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 IL16Q14005 1332 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 TSPOAP1O95153 1857 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 RIMS2Q9UQ26 1411 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 DIAPH1O60610 1272 aaKnown RBP5.5□□□□□ -1.53
SEC22B-202ENST00000618538 AAMPQ13685 434 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 NYAP1Q6ZVC0 841 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 FBXO22Q8NEZ5 403 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 TBC1D2Q9BYX2 928 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 ZBTB40Q9NUA8 1239 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 TERF2IPQ9NYB0 399 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 VPS9D1Q9Y2B5 631 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 EMILIN1Q9Y6C2 1016 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 MAP2P11137 1827 aaKnown RBP5.5□□□□□ -1.53
SEC22B-202ENST00000618538 AGLP35573 1532 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 PPIP5K1Q6PFW1 1433 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 GOLGA8CPA6NN73 597 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 CT47B1P0C2W7 299 aaPredicted RBP5.5□□□□□ -1.53
SEC22B-202ENST00000618538 PRKAR2BP31323 418 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 HDAC1Q13547 482 aaPredicted RBP5.5□□□□□ -1.53
SEC22B-202ENST00000618538 NME9Q86XW9 330 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 ITPRIPQ8IWB1 547 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 SMC5Q8IY18 1101 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 FTSJ3Q8IY81 847 aaKnown RBP5.5□□□□□ -1.53
SEC22B-202ENST00000618538 TSPYL6Q8N831 410 aa5.5□□□□□ -1.53
SEC22B-202ENST00000618538 SLKQ9H2G2 1235 aaPredicted RBP5.5□□□□□ -1.53
SEC22B-202ENST00000618538 KNDC1Q76NI1 1749 aa5.49□□□□□ -1.53
SEC22B-202ENST00000618538 MON2Q7Z3U7 1717 aa5.49□□□□□ -1.53
SEC22B-202ENST00000618538 DLG5Q8TDM6 1919 aa5.49□□□□□ -1.53
SEC22B-202ENST00000618538 HMOX1P09601 288 aa5.49□□□□□ -1.53
SEC22B-202ENST00000618538 PTPN5P54829 565 aa5.49□□□□□ -1.53
SEC22B-202ENST00000618538 RWDD1Q9H446 243 aaPredicted RBP5.49□□□□□ -1.53
SEC22B-202ENST00000618538 C3P01024 1663 aa5.49□□□□□ -1.53
SEC22B-202ENST00000618538 IL13P35225 146 aa5.48□□□□□ -1.53
SEC22B-202ENST00000618538 CYB5RLQ6IPT4 315 aa5.48□□□□□ -1.53
SEC22B-202ENST00000618538 HDGFL2Q7Z4V5 671 aaPredicted RBP5.48□□□□□ -1.53
SEC22B-202ENST00000618538 CDK12Q9NYV4 1490 aaPredicted RBP5.48□□□□□ -1.53
SEC22B-202ENST00000618538 PRR36Q9H6K5 1346 aa5.48□□□□□ -1.53
SEC22B-202ENST00000618538 PTCH1Q13635 1447 aa5.48□□□□□ -1.53
SEC22B-202ENST00000618538 NRKQ7Z2Y5 1582 aa5.48□□□□□ -1.53
SEC22B-202ENST00000618538 PIK3R4Q99570 1358 aa5.48□□□□□ -1.53
SEC22B-202ENST00000618538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.48□□□□□ -1.53
SEC22B-202ENST00000618538 FCHSD2O94868 740 aa5.48□□□□□ -1.53
SEC22B-202ENST00000618538 ZNF853P0CG23 659 aa5.48□□□□□ -1.53
SEC22B-202ENST00000618538 PSEN2P49810 448 aa5.48□□□□□ -1.53
SEC22B-202ENST00000618538 SIRT2Q8IXJ6 389 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms