RNA–Protein interactions for RNA: ENST00000616833.5

CLN5-203, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-203ENST00000616833 FMN2Q9NZ56 1722 aa27.55■■■□□ 2
CLN5-203ENST00000616833 TSPYL4Q9UJ04 414 aa27.55■■■□□ 2
CLN5-203ENST00000616833 ARHGAP45Q92619 1136 aa27.54■■■□□ 2
CLN5-203ENST00000616833 ARHGEF10O15013 1369 aa27.53■■■□□ 2
CLN5-203ENST00000616833 PIK3R4Q99570 1358 aa27.53■■■□□ 2
CLN5-203ENST00000616833 LMOD2Q6P5Q4 547 aa27.52■■■□□ 2
CLN5-203ENST00000616833 NUCB1Q02818 461 aa27.51■■■□□ 2
CLN5-203ENST00000616833 CHD1LQ86WJ1 897 aa27.51■■■□□ 2
CLN5-203ENST00000616833 CRB1P82279 1406 aa27.51■■■□□ 2
CLN5-203ENST00000616833 API5Q9BZZ5 524 aaKnown RBP27.51■■□□□ 1.99
CLN5-203ENST00000616833 IGSF1Q8N6C5 1336 aa27.51■■□□□ 1.99
CLN5-203ENST00000616833 SLC4A2P04920 1241 aa27.5■■□□□ 1.99
CLN5-203ENST00000616833 G2E3Q7L622 706 aa27.5■■□□□ 1.99
CLN5-203ENST00000616833 PSME1Q06323 249 aa27.49■■□□□ 1.99
CLN5-203ENST00000616833 ORAI2Q96SN7 254 aa27.49■■□□□ 1.99
CLN5-203ENST00000616833 F6X3S4 739 aa27.49■■□□□ 1.99
CLN5-203ENST00000616833 APBB1O00213 710 aa27.48■■□□□ 1.99
CLN5-203ENST00000616833 UPF2Q9HAU5 1272 aaKnown RBP27.48■■□□□ 1.99
CLN5-203ENST00000616833 SPRYD3Q8NCJ5 442 aa27.48■■□□□ 1.99
CLN5-203ENST00000616833 SLC4A10Q6U841 1118 aa27.47■■□□□ 1.99
CLN5-203ENST00000616833 ANKARQ7Z5J8 1434 aa27.47■■□□□ 1.99
CLN5-203ENST00000616833 SLKQ9H2G2 1235 aaPredicted RBP27.46■■□□□ 1.99
CLN5-203ENST00000616833 TBC1D32Q96NH3 1257 aa27.45■■□□□ 1.99
CLN5-203ENST00000616833 MARF1Q9Y4F3 1742 aaKnown RBP27.45■■□□□ 1.98
CLN5-203ENST00000616833 KDRP35968 1356 aa27.44■■□□□ 1.98
CLN5-203ENST00000616833 CHD2O14647 1828 aaKnown RBP27.44■■□□□ 1.98
CLN5-203ENST00000616833 NFKBIBQ15653 356 aa27.43■■□□□ 1.98
CLN5-203ENST00000616833 LRRC59Q96AG4 307 aaKnown RBP27.43■■□□□ 1.98
CLN5-203ENST00000616833 MEIS3Q99687 375 aa27.43■■□□□ 1.98
CLN5-203ENST00000616833 DNAJC5Q9H3Z4 198 aa27.43■■□□□ 1.98
CLN5-203ENST00000616833 MSH6P52701 1360 aa27.42■■□□□ 1.98
CLN5-203ENST00000616833 GAS2L2Q8NHY3 880 aa27.42■■□□□ 1.98
CLN5-203ENST00000616833 RGS12O14924 1447 aa27.42■■□□□ 1.98
CLN5-203ENST00000616833 IL17REQ8NFR9 667 aa27.41■■□□□ 1.98
CLN5-203ENST00000616833 GNAT3A8MTJ3 354 aa27.41■■□□□ 1.98
CLN5-203ENST00000616833 C16orf71Q8IYS4 520 aaPredicted RBP27.4■■□□□ 1.98
CLN5-203ENST00000616833 NBPF6Q5VWK0 638 aa27.39■■□□□ 1.98
CLN5-203ENST00000616833 NBPF4Q96M43 638 aa27.39■■□□□ 1.98
CLN5-203ENST00000616833 C22orf23Q9BZE7 217 aa27.39■■□□□ 1.97
CLN5-203ENST00000616833 KIAA0232Q92628 1395 aa27.38■■□□□ 1.97
CLN5-203ENST00000616833 INTS3Q68E01 1043 aaKnown RBP27.38■■□□□ 1.97
CLN5-203ENST00000616833 GCC1Q96CN9 775 aa27.37■■□□□ 1.97
CLN5-203ENST00000616833 SMARCA5O60264 1052 aaPredicted RBP27.36■■□□□ 1.97
CLN5-203ENST00000616833 NWD1Q149M9 1564 aa27.36■■□□□ 1.97
CLN5-203ENST00000616833 FRAT2O75474 233 aaPredicted RBP27.36■■□□□ 1.97
CLN5-203ENST00000616833 CHMP4BQ9H444 224 aaKnown RBP27.36■■□□□ 1.97
CLN5-203ENST00000616833 TBC1D2Q9BYX2 928 aa27.35■■□□□ 1.97
CLN5-203ENST00000616833 OTUD7AQ8TE49 926 aaPredicted RBP27.34■■□□□ 1.97
CLN5-203ENST00000616833 LTN1O94822 1766 aa27.34■■□□□ 1.97
CLN5-203ENST00000616833 NPHP4O75161 1426 aaPredicted RBP27.34■■□□□ 1.97
CLN5-203ENST00000616833 DDX17Q92841 729 aaKnown RBP27.33■■□□□ 1.97
CLN5-203ENST00000616833 LGR6Q9HBX8 967 aa27.33■■□□□ 1.97
CLN5-203ENST00000616833 BECN1Q14457 450 aa27.33■■□□□ 1.97
CLN5-203ENST00000616833 ADGRL3Q9HAR2 1447 aa27.32■■□□□ 1.96
CLN5-203ENST00000616833 PROSER2Q86WR7 435 aaPredicted RBP27.32■■□□□ 1.96
CLN5-203ENST00000616833 CEP85Q6P2H3 762 aa27.32■■□□□ 1.96
CLN5-203ENST00000616833 IP6K1Q92551 441 aa27.32■■□□□ 1.96
CLN5-203ENST00000616833 MAP3K5Q99683 1374 aa27.31■■□□□ 1.96
CLN5-203ENST00000616833 HAP1P54257 671 aaPredicted RBP27.3■■□□□ 1.96
CLN5-203ENST00000616833 FKBP5Q13451 457 aaPredicted RBP27.3■■□□□ 1.96
CLN5-203ENST00000616833 ADAMTSL3P82987 1691 aa27.3■■□□□ 1.96
CLN5-203ENST00000616833 PTPRCP08575 1304 aa27.3■■□□□ 1.96
CLN5-203ENST00000616833 STK31Q9BXU1 1019 aa27.3■■□□□ 1.96
CLN5-203ENST00000616833 RTL1A6NKG5 1358 aa27.29■■□□□ 1.96
CLN5-203ENST00000616833 ATP10DQ9P241 1426 aa27.29■■□□□ 1.96
CLN5-203ENST00000616833 RGPD2P0DJD1 1756 aa27.28■■□□□ 1.96
CLN5-203ENST00000616833 EIF2S2P20042 333 aaKnown RBP27.28■■□□□ 1.96
CLN5-203ENST00000616833 ANKRD44Q8N8A2 993 aa27.28■■□□□ 1.96
CLN5-203ENST00000616833 ZNF142P52746 1687 aaPredicted RBP27.28■■□□□ 1.96
CLN5-203ENST00000616833 KCNQ3O43525 872 aa27.28■■□□□ 1.96
CLN5-203ENST00000616833 GCP02774 474 aa27.27■■□□□ 1.96
CLN5-203ENST00000616833 DCTPP1Q9H773 170 aa27.27■■□□□ 1.96
CLN5-203ENST00000616833 TAF7Q15545 349 aaPredicted RBP27.27■■□□□ 1.96
CLN5-203ENST00000616833 MPRIPQ6WCQ1 1025 aa27.27■■□□□ 1.96
CLN5-203ENST00000616833 FLIIQ13045 1269 aa27.26■■□□□ 1.95
CLN5-203ENST00000616833 BMP2KLQ5H9B9 411 aa27.26■■□□□ 1.95
CLN5-203ENST00000616833 GSPT1P15170 499 aaKnown RBP27.26■■□□□ 1.95
CLN5-203ENST00000616833 PHAXQ9H814 394 aaKnown RBP27.25■■□□□ 1.95
CLN5-203ENST00000616833 TBC1D9Q6ZT07 1266 aa27.25■■□□□ 1.95
CLN5-203ENST00000616833 PLEKHM2Q8IWE5 1019 aa27.25■■□□□ 1.95
CLN5-203ENST00000616833 ZC3H6P61129 1189 aaKnown RBP27.24■■□□□ 1.95
CLN5-203ENST00000616833 NFAT5O94916 1531 aa27.24■■□□□ 1.95
CLN5-203ENST00000616833 ANXA1P04083 346 aa27.24■■□□□ 1.95
CLN5-203ENST00000616833 AXIN2Q9Y2T1 843 aa27.24■■□□□ 1.95
CLN5-203ENST00000616833 USP35Q9P2H5 1018 aa27.23■■□□□ 1.95
CLN5-203ENST00000616833 CCDC30Q5VVM6 783 aa27.22■■□□□ 1.95
CLN5-203ENST00000616833 KRT28Q7Z3Y7 464 aa27.22■■□□□ 1.95
CLN5-203ENST00000616833 HTATSF1O43719 755 aaKnown RBP27.22■■□□□ 1.95
CLN5-203ENST00000616833 ZNF530Q6P9A1 599 aaPredicted RBP27.21■■□□□ 1.95
CLN5-203ENST00000616833 KIF24Q5T7B8 1368 aa27.21■■□□□ 1.95
CLN5-203ENST00000616833 HDGFL1Q5TGJ6 251 aa27.21■■□□□ 1.95
CLN5-203ENST00000616833 EXOC6BQ9Y2D4 811 aa27.21■■□□□ 1.95
CLN5-203ENST00000616833 RPAP2Q8IXW5 612 aaPredicted RBP27.2■■□□□ 1.95
CLN5-203ENST00000616833 KCNH5Q8NCM2 988 aa27.2■■□□□ 1.95
CLN5-203ENST00000616833 TSHZ3Q63HK5 1081 aa27.2■■□□□ 1.94
CLN5-203ENST00000616833 ANKRD24Q8TF21 1146 aa27.19■■□□□ 1.94
CLN5-203ENST00000616833 ARHGEF25Q86VW2 580 aa27.17■■□□□ 1.94
CLN5-203ENST00000616833 RBM42Q9BTD8 480 aaKnown RBP27.17■■□□□ 1.94
CLN5-203ENST00000616833 LRRC37A3O60309 1634 aa27.17■■□□□ 1.94
CLN5-203ENST00000616833 CCT4P50991 539 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms