RNA–Protein interactions for RNA: ENST00000615680.4

DCLK1-208, Transcript of doublecortin like kinase 1, humanhuman

TSL 2 BASIC

Gene DCLK1, Length 7,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-208ENST00000615680 KIF14Q15058 1648 aa8.24□□□□□ -1.09
DCLK1-208ENST00000615680 LUC7LQ9NQ29 371 aaKnown RBP8.23□□□□□ -1.09
DCLK1-208ENST00000615680 TRMT112Q9UI30 125 aaKnown RBP8.23□□□□□ -1.09
DCLK1-208ENST00000615680 HDAC9Q9UKV0 1011 aa8.23□□□□□ -1.09
DCLK1-208ENST00000615680 PPP1R42Q7Z4L9 355 aa8.23□□□□□ -1.09
DCLK1-208ENST00000615680 LRRCC1Q9C099 1032 aa8.23□□□□□ -1.09
DCLK1-208ENST00000615680 NPHP3Q7Z494 1330 aa8.23□□□□□ -1.09
DCLK1-208ENST00000615680 SLC5A1P13866 664 aa8.23□□□□□ -1.09
DCLK1-208ENST00000615680 KIAA1107Q9UPP5 1409 aa8.23□□□□□ -1.09
DCLK1-208ENST00000615680 IFIT5Q13325 482 aaKnown RBP8.23□□□□□ -1.09
DCLK1-208ENST00000615680 KIF7Q2M1P5 1343 aa8.23□□□□□ -1.09
DCLK1-208ENST00000615680 PLB1Q6P1J6 1458 aa8.23□□□□□ -1.09
DCLK1-208ENST00000615680 SMARCC1Q92922 1105 aaPredicted RBP8.23□□□□□ -1.09
DCLK1-208ENST00000615680 SMARCE1Q969G3 411 aa8.23□□□□□ -1.09
DCLK1-208ENST00000615680 MCM2P49736 904 aa8.23□□□□□ -1.09
DCLK1-208ENST00000615680 BEGAINQ9BUH8 593 aa8.23□□□□□ -1.09
DCLK1-208ENST00000615680 IQGAP2Q13576 1575 aa8.22□□□□□ -1.09
DCLK1-208ENST00000615680 CCDC141Q6ZP82 1450 aa8.22□□□□□ -1.09
DCLK1-208ENST00000615680 KINO60870 393 aaKnown RBP8.22□□□□□ -1.09
DCLK1-208ENST00000615680 CT47B1P0C2W7 299 aaPredicted RBP8.22□□□□□ -1.09
DCLK1-208ENST00000615680 TNNT3P45378 269 aaPredicted RBP8.22□□□□□ -1.09
DCLK1-208ENST00000615680 AACSQ86V21 672 aa8.22□□□□□ -1.09
DCLK1-208ENST00000615680 WASF1Q92558 559 aa8.22□□□□□ -1.09
DCLK1-208ENST00000615680 LMTK3Q96Q04 1460 aa8.22□□□□□ -1.09
DCLK1-208ENST00000615680 CCDC85AQ96PX6 553 aaPredicted RBP8.22□□□□□ -1.09
DCLK1-208ENST00000615680 CABP5Q9NP86 173 aa8.22□□□□□ -1.09
DCLK1-208ENST00000615680 LDHCP07864 332 aa8.22□□□□□ -1.09
DCLK1-208ENST00000615680 SETQ01105 290 aaPredicted RBP8.22□□□□□ -1.09
DCLK1-208ENST00000615680 GCC1Q96CN9 775 aa8.22□□□□□ -1.09
DCLK1-208ENST00000615680 FMNL2Q96PY5 1086 aa8.22□□□□□ -1.09
DCLK1-208ENST00000615680 ZNF444Q8N0Y2 327 aaPredicted RBP8.22□□□□□ -1.09
DCLK1-208ENST00000615680 OGFOD1Q8N543 542 aa8.22□□□□□ -1.09
DCLK1-208ENST00000615680 BRD4O60885 1362 aaPredicted RBP8.21□□□□□ -1.09
DCLK1-208ENST00000615680 FCHSD2O94868 740 aa8.21□□□□□ -1.09
DCLK1-208ENST00000615680 EXOSC9Q06265 439 aaKnown RBP8.21□□□□□ -1.09
DCLK1-208ENST00000615680 POTEJP0CG39 1038 aa8.21□□□□□ -1.09
DCLK1-208ENST00000615680 LMOD1P29536 600 aaPredicted RBP8.21□□□□□ -1.09
DCLK1-208ENST00000615680 TXLNBQ8N3L3 684 aa8.21□□□□□ -1.09
DCLK1-208ENST00000615680 ANKRD18BA2A2Z9 1011 aa8.21□□□□□ -1.1
DCLK1-208ENST00000615680 SRGAP3O43295 1099 aa8.21□□□□□ -1.1
DCLK1-208ENST00000615680 HLA-DOAP06340 250 aa8.21□□□□□ -1.1
DCLK1-208ENST00000615680 STK38Q15208 465 aa8.21□□□□□ -1.1
DCLK1-208ENST00000615680 TNRQ92752 1358 aa8.21□□□□□ -1.1
DCLK1-208ENST00000615680 SSBP05455 408 aaKnown RBP eCLIP8.21□□□□□ -1.1
DCLK1-208ENST00000615680 PPP2R1AP30153 589 aa8.21□□□□□ -1.1
DCLK1-208ENST00000615680 MAP3K12Q12852 859 aa8.21□□□□□ -1.1
DCLK1-208ENST00000615680 CCDC96Q2M329 555 aa8.21□□□□□ -1.1
DCLK1-208ENST00000615680 ZNHIT6Q9NWK9 470 aaKnown RBP8.21□□□□□ -1.1
DCLK1-208ENST00000615680 SPINK5Q9NQ38 1064 aaPredicted RBP8.21□□□□□ -1.1
DCLK1-208ENST00000615680 SPTY2D1Q68D10 685 aaPredicted RBP8.2□□□□□ -1.1
DCLK1-208ENST00000615680 WAPLQ7Z5K2 1190 aa8.2□□□□□ -1.1
DCLK1-208ENST00000615680 IFNL2Q8IZJ0 200 aa8.2□□□□□ -1.1
DCLK1-208ENST00000615680 IPO9Q96P70 1041 aaKnown RBP8.2□□□□□ -1.1
DCLK1-208ENST00000615680 CYP46A1Q9Y6A2 500 aa8.2□□□□□ -1.1
DCLK1-208ENST00000615680 NBPF6Q5VWK0 638 aa8.2□□□□□ -1.1
DCLK1-208ENST00000615680 NBPF5PQ86XG9 351 aaPredicted RBP8.2□□□□□ -1.1
DCLK1-208ENST00000615680 EXOC6Q8TAG9 804 aa8.2□□□□□ -1.1
DCLK1-208ENST00000615680 CCDC97Q96F63 343 aaPredicted RBP8.2□□□□□ -1.1
DCLK1-208ENST00000615680 NBPF4Q96M43 638 aa8.2□□□□□ -1.1
DCLK1-208ENST00000615680 RTN4Q9NQC3 1192 aaKnown RBP8.2□□□□□ -1.1
DCLK1-208ENST00000615680 DACH1Q9UI36 760 aa8.2□□□□□ -1.1
DCLK1-208ENST00000615680 PPP1R12BO60237 982 aaPredicted RBP8.2□□□□□ -1.1
DCLK1-208ENST00000615680 IMMTQ16891 758 aaKnown RBP8.2□□□□□ -1.1
DCLK1-208ENST00000615680 BAG3O95817 575 aa8.2□□□□□ -1.1
DCLK1-208ENST00000615680 PDILTQ8N807 584 aa8.2□□□□□ -1.1
DCLK1-208ENST00000615680 TAF7Q15545 349 aaPredicted RBP8.2□□□□□ -1.1
DCLK1-208ENST00000615680 JDP2Q8WYK2 163 aa8.2□□□□□ -1.1
DCLK1-208ENST00000615680 ZNF592Q92610 1267 aa8.2□□□□□ -1.1
DCLK1-208ENST00000615680 VTI1AQ96AJ9 217 aa8.2□□□□□ -1.1
DCLK1-208ENST00000615680 FAM13BQ9NYF5 915 aa8.2□□□□□ -1.1
DCLK1-208ENST00000615680 PARP3Q9Y6F1 533 aa8.2□□□□□ -1.1
DCLK1-208ENST00000615680 KRT32Q14532 448 aa8.19□□□□□ -1.1
DCLK1-208ENST00000615680 ANKRD18AQ8IVF6 992 aa8.19□□□□□ -1.1
DCLK1-208ENST00000615680 CAGE1Q8TC20 777 aa8.19□□□□□ -1.1
DCLK1-208ENST00000615680 ZNF428Q96B54 188 aa8.19□□□□□ -1.1
DCLK1-208ENST00000615680 TANGO6Q9C0B7 1094 aa8.19□□□□□ -1.1
DCLK1-208ENST00000615680 ADAMTS8Q9UP79 889 aa8.19□□□□□ -1.1
DCLK1-208ENST00000615680 ZRSR2Q15696 482 aaKnown RBP8.19□□□□□ -1.1
DCLK1-208ENST00000615680 SETDB2Q96T68 719 aa8.19□□□□□ -1.1
DCLK1-208ENST00000615680 DDB1Q16531 1140 aa8.19□□□□□ -1.1
DCLK1-208ENST00000615680 PANK1Q8TE04 598 aa8.19□□□□□ -1.1
DCLK1-208ENST00000615680 ACBD3Q9H3P7 528 aa8.19□□□□□ -1.1
DCLK1-208ENST00000615680 HYPKQ9NX55 129 aa8.19□□□□□ -1.1
DCLK1-208ENST00000615680 VSIG10Q8N0Z9 540 aa8.19□□□□□ -1.1
DCLK1-208ENST00000615680 CCDC150Q8NCX0 1101 aa8.19□□□□□ -1.1
DCLK1-208ENST00000615680 TFCP2L1Q9NZI6 479 aa8.19□□□□□ -1.1
DCLK1-208ENST00000615680 ARHGEF11O15085 1522 aa8.18□□□□□ -1.1
DCLK1-208ENST00000615680 NFE2L2Q16236 605 aa8.18□□□□□ -1.1
DCLK1-208ENST00000615680 WDR63Q8IWG1 891 aa8.18□□□□□ -1.1
DCLK1-208ENST00000615680 LRRC59Q96AG4 307 aaKnown RBP8.18□□□□□ -1.1
DCLK1-208ENST00000615680 MYD88Q99836 296 aa8.18□□□□□ -1.1
DCLK1-208ENST00000615680 NOB1Q9ULX3 412 aaKnown RBP8.18□□□□□ -1.1
DCLK1-208ENST00000615680 WASLO00401 505 aaPredicted RBP8.18□□□□□ -1.1
DCLK1-208ENST00000615680 IQCA1Q86XH1 822 aa8.18□□□□□ -1.1
DCLK1-208ENST00000615680 SMC2O95347 1197 aa8.18□□□□□ -1.1
DCLK1-208ENST00000615680 STK32BQ9NY57 414 aa8.18□□□□□ -1.1
DCLK1-208ENST00000615680 CUL7Q14999 1698 aa8.18□□□□□ -1.1
DCLK1-208ENST00000615680 MINDY4BA8MYZ0 360 aa8.18□□□□□ -1.1
DCLK1-208ENST00000615680 NAPBQ9H115 298 aa8.18□□□□□ -1.1
DCLK1-208ENST00000615680 FANCAO15360 1455 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms