RNA–Protein interactions for RNA: ENST00000614640.4

MSRB3-212, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MSRB3, Length 4,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-212ENST00000614640 OVOS2A0A0J9YW53 1432 aa11.48□□□□□ -0.57
MSRB3-212ENST00000614640 OVOS2Q6IE36 1432 aa11.48□□□□□ -0.57
MSRB3-212ENST00000614640 C22orf23Q9BZE7 217 aa11.48□□□□□ -0.57
MSRB3-212ENST00000614640 MFAP1P55081 439 aaKnown RBP11.48□□□□□ -0.57
MSRB3-212ENST00000614640 LNPKQ9C0E8 428 aa11.48□□□□□ -0.57
MSRB3-212ENST00000614640 C1orf115Q9H7X2 142 aa11.48□□□□□ -0.57
MSRB3-212ENST00000614640 TWISTNBQ3B726 338 aaPredicted RBP11.47□□□□□ -0.57
MSRB3-212ENST00000614640 KRT28Q7Z3Y7 464 aa11.47□□□□□ -0.57
MSRB3-212ENST00000614640 CHD1LQ86WJ1 897 aa11.47□□□□□ -0.57
MSRB3-212ENST00000614640 AEBP1Q8IUX7 1158 aa11.47□□□□□ -0.57
MSRB3-212ENST00000614640 KDM4FA0A1W2PPD8 638 aa11.47□□□□□ -0.57
MSRB3-212ENST00000614640 RTF1Q92541 710 aaKnown RBP11.47□□□□□ -0.57
MSRB3-212ENST00000614640 TMEM94Q12767 1356 aa11.47□□□□□ -0.57
MSRB3-212ENST00000614640 EIF4A2Q14240 407 aaKnown RBP11.47□□□□□ -0.57
MSRB3-212ENST00000614640 NPHP3Q7Z494 1330 aa11.45□□□□□ -0.58
MSRB3-212ENST00000614640 LTV1Q96GA3 475 aaPredicted RBP11.45□□□□□ -0.58
MSRB3-212ENST00000614640 SSH2Q76I76 1423 aa11.45□□□□□ -0.58
MSRB3-212ENST00000614640 SULT6B1Q6IMI4 303 aa11.45□□□□□ -0.58
MSRB3-212ENST00000614640 FLT4P35916 1363 aa11.45□□□□□ -0.58
MSRB3-212ENST00000614640 NCOA3Q9Y6Q9 1424 aa11.45□□□□□ -0.58
MSRB3-212ENST00000614640 ORAI2Q96SN7 254 aa11.44□□□□□ -0.58
MSRB3-212ENST00000614640 RGS12O14924 1447 aa11.44□□□□□ -0.58
MSRB3-212ENST00000614640 XPCQ01831 940 aaPredicted RBP11.44□□□□□ -0.58
MSRB3-212ENST00000614640 USP31Q70CQ4 1352 aa11.44□□□□□ -0.58
MSRB3-212ENST00000614640 KRT24Q2M2I5 525 aa11.43□□□□□ -0.58
MSRB3-212ENST00000614640 GCC1Q96CN9 775 aa11.43□□□□□ -0.58
MSRB3-212ENST00000614640 XRN1Q8IZH2 1706 aaKnown RBP11.43□□□□□ -0.58
MSRB3-212ENST00000614640 RBM25P49756 843 aaKnown RBP11.43□□□□□ -0.58
MSRB3-212ENST00000614640 BMP2KLQ5H9B9 411 aa11.43□□□□□ -0.58
MSRB3-212ENST00000614640 BRPF3Q9ULD4 1205 aa11.43□□□□□ -0.58
MSRB3-212ENST00000614640 SBNO1A3KN83 1393 aa11.43□□□□□ -0.58
MSRB3-212ENST00000614640 ANKRD45Q5TZF3 282 aa11.43□□□□□ -0.58
MSRB3-212ENST00000614640 HSP90AB2PQ58FF8 381 aa11.43□□□□□ -0.58
MSRB3-212ENST00000614640 MAP3K19Q56UN5 1328 aa11.43□□□□□ -0.58
MSRB3-212ENST00000614640 FMN2Q9NZ56 1722 aa11.42□□□□□ -0.58
MSRB3-212ENST00000614640 SPRYD3Q8NCJ5 442 aa11.42□□□□□ -0.58
MSRB3-212ENST00000614640 RGPD8O14715 1765 aaPredicted RBP11.42□□□□□ -0.58
MSRB3-212ENST00000614640 CHL1O00533 1208 aa11.42□□□□□ -0.58
MSRB3-212ENST00000614640 GAS2L2Q8NHY3 880 aa11.42□□□□□ -0.58
MSRB3-212ENST00000614640 CSB-PGBD3P0DP91 1061 aa11.41□□□□□ -0.58
MSRB3-212ENST00000614640 MCM10Q7L590 875 aa11.41□□□□□ -0.58
MSRB3-212ENST00000614640 KIF2CQ99661 725 aa11.41□□□□□ -0.58
MSRB3-212ENST00000614640 API5Q9BZZ5 524 aaKnown RBP11.41□□□□□ -0.58
MSRB3-212ENST00000614640 KIF24Q5T7B8 1368 aa11.41□□□□□ -0.58
MSRB3-212ENST00000614640 CRB1P82279 1406 aa11.41□□□□□ -0.58
MSRB3-212ENST00000614640 CHMP4BQ9H444 224 aaKnown RBP11.41□□□□□ -0.58
MSRB3-212ENST00000614640 ATP10DQ9P241 1426 aa11.41□□□□□ -0.58
MSRB3-212ENST00000614640 INTS3Q68E01 1043 aaKnown RBP11.4□□□□□ -0.58
MSRB3-212ENST00000614640 DDIT3P35638 169 aa11.4□□□□□ -0.59
MSRB3-212ENST00000614640 DCCP43146 1447 aa11.39□□□□□ -0.59
MSRB3-212ENST00000614640 KIAA0232Q92628 1395 aa11.39□□□□□ -0.59
MSRB3-212ENST00000614640 PIK3C2AO00443 1686 aa11.39□□□□□ -0.59
MSRB3-212ENST00000614640 CHD2O14647 1828 aaKnown RBP11.39□□□□□ -0.59
MSRB3-212ENST00000614640 GCP02774 474 aa11.38□□□□□ -0.59
MSRB3-212ENST00000614640 HOXC9P31274 260 aa11.38□□□□□ -0.59
MSRB3-212ENST00000614640 TBC1D9Q6ZT07 1266 aa11.38□□□□□ -0.59
MSRB3-212ENST00000614640 C1orf167Q5SNV9 1468 aa11.38□□□□□ -0.59
MSRB3-212ENST00000614640 GSPT1P15170 499 aaKnown RBP11.38□□□□□ -0.59
MSRB3-212ENST00000614640 IP6K1Q92551 441 aa11.38□□□□□ -0.59
MSRB3-212ENST00000614640 MARF1Q9Y4F3 1742 aaKnown RBP11.38□□□□□ -0.59
MSRB3-212ENST00000614640 SNX21Q969T3 373 aa11.38□□□□□ -0.59
MSRB3-212ENST00000614640 DCTPP1Q9H773 170 aa11.38□□□□□ -0.59
MSRB3-212ENST00000614640 ARHGEF10O15013 1369 aa11.37□□□□□ -0.59
MSRB3-212ENST00000614640 RTN4Q9NQC3 1192 aaKnown RBP11.37□□□□□ -0.59
MSRB3-212ENST00000614640 SLAIN2Q9P270 581 aa11.37□□□□□ -0.59
MSRB3-212ENST00000614640 ZNF335Q9H4Z2 1342 aaPredicted RBP11.37□□□□□ -0.59
MSRB3-212ENST00000614640 RTL1A6NKG5 1358 aa11.37□□□□□ -0.59
MSRB3-212ENST00000614640 PLEKHM2Q8IWE5 1019 aa11.37□□□□□ -0.59
MSRB3-212ENST00000614640 CHMP4AQ9BY43 222 aa11.37□□□□□ -0.59
MSRB3-212ENST00000614640 CHMP5Q9NZZ3 219 aa11.37□□□□□ -0.59
MSRB3-212ENST00000614640 KDRP35968 1356 aa11.36□□□□□ -0.59
MSRB3-212ENST00000614640 CD2BP2O95400 341 aaKnown RBP11.36□□□□□ -0.59
MSRB3-212ENST00000614640 MCM4P33991 863 aa11.36□□□□□ -0.59
MSRB3-212ENST00000614640 MTHFSDQ2M296 383 aaKnown RBP11.36□□□□□ -0.59
MSRB3-212ENST00000614640 PLEKHO1Q53GL0 409 aaPredicted RBP11.35□□□□□ -0.59
MSRB3-212ENST00000614640 HSCBQ8IWL3 235 aa11.35□□□□□ -0.59
MSRB3-212ENST00000614640 ANKRD44Q8N8A2 993 aa11.35□□□□□ -0.59
MSRB3-212ENST00000614640 MIS18AQ9NYP9 233 aa11.35□□□□□ -0.59
MSRB3-212ENST00000614640 ZC3H6P61129 1189 aaKnown RBP11.35□□□□□ -0.59
MSRB3-212ENST00000614640 C1orf141Q5JVX7 400 aa11.35□□□□□ -0.59
MSRB3-212ENST00000614640 C16orf71Q8IYS4 520 aaPredicted RBP11.35□□□□□ -0.59
MSRB3-212ENST00000614640 CEP85Q6P2H3 762 aa11.35□□□□□ -0.59
MSRB3-212ENST00000614640 RAPGEF4Q8WZA2 1011 aa11.35□□□□□ -0.59
MSRB3-212ENST00000614640 NWD1Q149M9 1564 aa11.35□□□□□ -0.59
MSRB3-212ENST00000614640 LRRC37A3O60309 1634 aa11.34□□□□□ -0.59
MSRB3-212ENST00000614640 EYA1Q99502 592 aa11.34□□□□□ -0.59
MSRB3-212ENST00000614640 PTPRCP08575 1304 aa11.34□□□□□ -0.59
MSRB3-212ENST00000614640 MEIS3Q99687 375 aa11.34□□□□□ -0.59
MSRB3-212ENST00000614640 NLRP2Q9NX02 1062 aa11.34□□□□□ -0.59
MSRB3-212ENST00000614640 LMTK3Q96Q04 1460 aa11.34□□□□□ -0.59
MSRB3-212ENST00000614640 OTUD7AQ8TE49 926 aaPredicted RBP11.34□□□□□ -0.59
MSRB3-212ENST00000614640 IGSF1Q8N6C5 1336 aa11.34□□□□□ -0.59
MSRB3-212ENST00000614640 RBM42Q9BTD8 480 aaKnown RBP11.33□□□□□ -0.6
MSRB3-212ENST00000614640 G2E3Q7L622 706 aa11.33□□□□□ -0.6
MSRB3-212ENST00000614640 SLC4A2P04920 1241 aa11.32□□□□□ -0.6
MSRB3-212ENST00000614640 AMOTQ4VCS5 1084 aa11.32□□□□□ -0.6
MSRB3-212ENST00000614640 TTC22Q5TAA0 569 aa11.32□□□□□ -0.6
MSRB3-212ENST00000614640 PRDM11Q9NQV5 511 aa11.32□□□□□ -0.6
MSRB3-212ENST00000614640 USP54Q70EL1 1684 aa11.32□□□□□ -0.6
MSRB3-212ENST00000614640 HTATSF1O43719 755 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms