RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 PPIP5K1Q6PFW1 1433 aa13.28□□□□□ -0.28
FAM3A-221ENST00000612856 ATP5J2-PTCD1G3V325 749 aa13.28□□□□□ -0.28
FAM3A-221ENST00000612856 APPP05067 770 aa13.28□□□□□ -0.28
FAM3A-221ENST00000612856 MRE11P49959 708 aa13.28□□□□□ -0.28
FAM3A-221ENST00000612856 NFE2L2Q16236 605 aa13.28□□□□□ -0.28
FAM3A-221ENST00000612856 ABCA6Q8N139 1617 aa13.28□□□□□ -0.28
FAM3A-221ENST00000612856 API5Q9BZZ5 524 aaKnown RBP13.28□□□□□ -0.28
FAM3A-221ENST00000612856 BCL11BQ9C0K0 894 aaPredicted RBP13.28□□□□□ -0.28
FAM3A-221ENST00000612856 CCDC30Q5VVM6 783 aa13.27□□□□□ -0.28
FAM3A-221ENST00000612856 MAP3K4Q9Y6R4 1608 aa13.27□□□□□ -0.29
FAM3A-221ENST00000612856 YTHDC2Q9H6S0 1430 aaKnown RBP13.27□□□□□ -0.29
FAM3A-221ENST00000612856 CLCN1P35523 988 aa13.27□□□□□ -0.29
FAM3A-221ENST00000612856 G3BP1Q13283 466 aaKnown RBP eCLIP13.27□□□□□ -0.29
FAM3A-221ENST00000612856 PHACTR3Q96KR7 559 aa13.27□□□□□ -0.29
FAM3A-221ENST00000612856 GOLGA6L22H0YM25 854 aa13.27□□□□□ -0.29
FAM3A-221ENST00000612856 FAM98CQ17RN3 349 aaKnown RBP13.26□□□□□ -0.29
FAM3A-221ENST00000612856 KDM4AO75164 1064 aa13.26□□□□□ -0.29
FAM3A-221ENST00000612856 GRPEL1Q9HAV7 217 aa13.26□□□□□ -0.29
FAM3A-221ENST00000612856 IL1RAPL2Q9NP60 686 aa13.26□□□□□ -0.29
FAM3A-221ENST00000612856 MAP3K19Q56UN5 1328 aa13.26□□□□□ -0.29
FAM3A-221ENST00000612856 POLR1AO95602 1720 aaPredicted RBP13.26□□□□□ -0.29
FAM3A-221ENST00000612856 IFIT2P09913 472 aaKnown RBP13.25□□□□□ -0.29
FAM3A-221ENST00000612856 EIF4A2Q14240 407 aaKnown RBP13.25□□□□□ -0.29
FAM3A-221ENST00000612856 ANKRD36BQ8N2N9 1353 aa13.25□□□□□ -0.29
FAM3A-221ENST00000612856 MAP4K4O95819 1239 aaPredicted RBP13.25□□□□□ -0.29
FAM3A-221ENST00000612856 PLCB2Q00722 1185 aa13.25□□□□□ -0.29
FAM3A-221ENST00000612856 FRMPD1Q5SYB0 1578 aa13.25□□□□□ -0.29
FAM3A-221ENST00000612856 METP08581 1390 aa13.25□□□□□ -0.29
FAM3A-221ENST00000612856 MCM4P33991 863 aa13.25□□□□□ -0.29
FAM3A-221ENST00000612856 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
FAM3A-221ENST00000612856 MAPK8IP2Q13387 824 aaPredicted RBP13.24□□□□□ -0.29
FAM3A-221ENST00000612856 TMEM2Q9UHN6 1383 aa13.24□□□□□ -0.29
FAM3A-221ENST00000612856 RNF123Q5XPI4 1314 aa13.24□□□□□ -0.29
FAM3A-221ENST00000612856 NFATC2IPQ8NCF5 419 aa13.24□□□□□ -0.29
FAM3A-221ENST00000612856 DDX19BQ9UMR2 479 aa13.24□□□□□ -0.29
FAM3A-221ENST00000612856 MYOM2P54296 1465 aa13.24□□□□□ -0.29
FAM3A-221ENST00000612856 CCDC27Q2M243 656 aa13.24□□□□□ -0.29
FAM3A-221ENST00000612856 C8orf34Q49A92 452 aa13.24□□□□□ -0.29
FAM3A-221ENST00000612856 KIF6Q6ZMV9 814 aa13.24□□□□□ -0.29
FAM3A-221ENST00000612856 NCBP3Q53F19 620 aaKnown RBP13.23□□□□□ -0.29
FAM3A-221ENST00000612856 EYA1Q99502 592 aa13.23□□□□□ -0.29
FAM3A-221ENST00000612856 TMEM94Q12767 1356 aa13.23□□□□□ -0.29
FAM3A-221ENST00000612856 CDK11BP21127 795 aaKnown RBP13.23□□□□□ -0.29
FAM3A-221ENST00000612856 SSH1Q8WYL5 1049 aa13.23□□□□□ -0.29
FAM3A-221ENST00000612856 MROH2AA6NES4 1674 aa13.23□□□□□ -0.29
FAM3A-221ENST00000612856 BLMP54132 1417 aaPredicted RBP13.23□□□□□ -0.29
FAM3A-221ENST00000612856 KCNQ4P56696 695 aa13.23□□□□□ -0.29
FAM3A-221ENST00000612856 DDB1Q16531 1140 aa13.23□□□□□ -0.29
FAM3A-221ENST00000612856 PDCL3Q9H2J4 239 aa13.23□□□□□ -0.29
FAM3A-221ENST00000612856 KDM5AP29375 1690 aaKnown RBP13.23□□□□□ -0.29
FAM3A-221ENST00000612856 DIP2CQ9Y2E4 1556 aa13.22□□□□□ -0.29
FAM3A-221ENST00000612856 RARSP54136 660 aaKnown RBP13.22□□□□□ -0.29
FAM3A-221ENST00000612856 CCDC24Q8N4L8 307 aa13.22□□□□□ -0.29
FAM3A-221ENST00000612856 SEC24BO95487 1268 aa13.22□□□□□ -0.29
FAM3A-221ENST00000612856 TPM2P07951 284 aa13.22□□□□□ -0.29
FAM3A-221ENST00000612856 RLBP1P12271 317 aa13.22□□□□□ -0.29
FAM3A-221ENST00000612856 DNAJC2Q99543 621 aaKnown RBP13.22□□□□□ -0.29
FAM3A-221ENST00000612856 EXOC6BQ9Y2D4 811 aa13.22□□□□□ -0.29
FAM3A-221ENST00000612856 RIMBP3CA6NJZ7 1639 aa13.21□□□□□ -0.29
FAM3A-221ENST00000612856 RIMBP3BA6NNM3 1639 aa13.21□□□□□ -0.29
FAM3A-221ENST00000612856 RIMBP3Q9UFD9 1639 aa13.21□□□□□ -0.29
FAM3A-221ENST00000612856 IGHDP01880 384 aa13.21□□□□□ -0.29
FAM3A-221ENST00000612856 TAF7Q15545 349 aaPredicted RBP13.21□□□□□ -0.29
FAM3A-221ENST00000612856 GPATCH3Q96I76 525 aa13.21□□□□□ -0.29
FAM3A-221ENST00000612856 CNNM1Q9NRU3 951 aa13.21□□□□□ -0.29
FAM3A-221ENST00000612856 KIF16BQ96L93 1317 aa13.21□□□□□ -0.3
FAM3A-221ENST00000612856 MPNDQ8N594 471 aa13.21□□□□□ -0.3
FAM3A-221ENST00000612856 CHMP5Q9NZZ3 219 aa13.21□□□□□ -0.3
FAM3A-221ENST00000612856 HDAC5Q9UQL6 1122 aa13.2□□□□□ -0.3
FAM3A-221ENST00000612856 ZCRB1Q8TBF4 217 aaKnown RBP13.2□□□□□ -0.3
FAM3A-221ENST00000612856 GBP4Q96PP9 640 aa13.2□□□□□ -0.3
FAM3A-221ENST00000612856 TBC1D2BQ9UPU7 963 aa13.2□□□□□ -0.3
FAM3A-221ENST00000612856 CFAP74Q9C0B2 1584 aa13.2□□□□□ -0.3
FAM3A-221ENST00000612856 ADGRB3O60242 1522 aa13.2□□□□□ -0.3
FAM3A-221ENST00000612856 HSP90B1P14625 803 aaKnown RBP13.2□□□□□ -0.3
FAM3A-221ENST00000612856 MTHFSDQ2M296 383 aaKnown RBP13.2□□□□□ -0.3
FAM3A-221ENST00000612856 WASHC4Q2M389 1173 aa13.2□□□□□ -0.3
FAM3A-221ENST00000612856 DDX49Q9Y6V7 483 aaKnown RBP13.2□□□□□ -0.3
FAM3A-221ENST00000612856 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
FAM3A-221ENST00000612856 MYD88Q99836 296 aa13.19□□□□□ -0.3
FAM3A-221ENST00000612856 SRCIN1Q9C0H9 1055 aa13.19□□□□□ -0.3
FAM3A-221ENST00000612856 NKTRP30414 1462 aaKnown RBP13.19□□□□□ -0.3
FAM3A-221ENST00000612856 IFNL2Q8IZJ0 200 aa13.19□□□□□ -0.3
FAM3A-221ENST00000612856 ANO2Q9NQ90 1003 aa13.19□□□□□ -0.3
FAM3A-221ENST00000612856 SRGAP3O43295 1099 aa13.19□□□□□ -0.3
FAM3A-221ENST00000612856 TMEM57Q8N5G2 664 aa13.18□□□□□ -0.3
FAM3A-221ENST00000612856 SYNMO15061 1565 aa13.18□□□□□ -0.3
FAM3A-221ENST00000612856 VWDEQ8N2E2 1590 aa13.18□□□□□ -0.3
FAM3A-221ENST00000612856 DEPDC5O75140 1603 aa13.18□□□□□ -0.3
FAM3A-221ENST00000612856 ZMYM4Q5VZL5 1548 aa13.18□□□□□ -0.3
FAM3A-221ENST00000612856 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
FAM3A-221ENST00000612856 FOSBP53539 338 aa13.18□□□□□ -0.3
FAM3A-221ENST00000612856 TBC1D2Q9BYX2 928 aa13.18□□□□□ -0.3
FAM3A-221ENST00000612856 DIAPH3Q9NSV4 1193 aa13.18□□□□□ -0.3
FAM3A-221ENST00000612856 STARD3NLO95772 234 aa13.17□□□□□ -0.3
FAM3A-221ENST00000612856 MCCP23508 829 aa13.17□□□□□ -0.3
FAM3A-221ENST00000612856 NASPP49321 788 aaPredicted RBP13.17□□□□□ -0.3
FAM3A-221ENST00000612856 ATF7IPQ6VMQ6 1270 aa13.17□□□□□ -0.3
FAM3A-221ENST00000612856 WDR63Q8IWG1 891 aa13.17□□□□□ -0.3
FAM3A-221ENST00000612856 ZNF521Q96K83 1311 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms