RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 RABEP1Q15276 862 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 C20orf194Q5TEA3 1177 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 PRDM11Q9NQV5 511 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 ATAD2Q6PL18 1390 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 CABP4P57796 275 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 BACH2Q9BYV9 841 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 PABPN1LA6NDY0 278 aaKnown RBP11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 KAT6BQ8WYB5 2073 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 WWC3Q9ULE0 1092 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 CCDC73Q6ZRK6 1079 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 USHBP1Q8N6Y0 703 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 ADGRL1O94910 1474 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 NOM1Q5C9Z4 860 aaKnown RBP11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 PSMA5P28066 241 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 SLFN5Q08AF3 891 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 EMILIN1Q9Y6C2 1016 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 FCHSD2O94868 740 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 PPP4R4Q6NUP7 873 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 HOOK1Q9UJC3 728 aaKnown RBP11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 SRCIN1Q9C0H9 1055 aa11.21□□□□□ -0.61
SRGAP2B-204ENST00000612199 IL1RAPL2Q9NP60 686 aa11.21□□□□□ -0.61
SRGAP2B-204ENST00000612199 MBD3O95983 291 aa11.21□□□□□ -0.61
SRGAP2B-204ENST00000612199 KRT18P05783 430 aaKnown RBP11.21□□□□□ -0.61
SRGAP2B-204ENST00000612199 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.21□□□□□ -0.61
SRGAP2B-204ENST00000612199 TMEM57Q8N5G2 664 aa11.21□□□□□ -0.61
SRGAP2B-204ENST00000612199 CUL7Q14999 1698 aa11.21□□□□□ -0.62
SRGAP2B-204ENST00000612199 RNF214Q8ND24 703 aa11.21□□□□□ -0.62
SRGAP2B-204ENST00000612199 ANKRD20A12PQ8NF67 263 aa11.21□□□□□ -0.62
SRGAP2B-204ENST00000612199 CCDC85AQ96PX6 553 aaPredicted RBP11.21□□□□□ -0.62
SRGAP2B-204ENST00000612199 FBLN1P23142 703 aa11.21□□□□□ -0.62
SRGAP2B-204ENST00000612199 BEGAINQ9BUH8 593 aa11.21□□□□□ -0.62
SRGAP2B-204ENST00000612199 FLIIQ13045 1269 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 NFE2L2Q16236 605 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 BTBD11A6QL63 1104 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 TRIM21P19474 475 aaKnown RBP11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 ANAPC15P60006 121 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 TEX35Q5T0J7 233 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 KIF6Q6ZMV9 814 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 CCDC173Q0VFZ6 552 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 ZNF771Q7L3S4 317 aaPredicted RBP11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 SRGAP3O43295 1099 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 SASS6Q6UVJ0 657 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 SAFBQ15424 915 aaKnown RBP eCLIP11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 ARL1P40616 181 aaPredicted RBP11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 FAM43AQ8N2R8 423 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 LRRCC1Q9C099 1032 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 HIP1O00291 1037 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 FOXO3O43524 673 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 ATP2B1P20020 1258 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 PDCP20941 246 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 CCT4P50991 539 aaKnown RBP11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 CNNM1Q9NRU3 951 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 STK25O00506 426 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 SH3BP5O60239 455 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 ERC1Q8IUD2 1116 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 KIF14Q15058 1648 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 TRAK2O60296 914 aa11.18□□□□□ -0.62
SRGAP2B-204ENST00000612199 ADRA2BP18089 450 aa11.18□□□□□ -0.62
SRGAP2B-204ENST00000612199 CCDC191Q8NCU4 936 aa11.18□□□□□ -0.62
SRGAP2B-204ENST00000612199 EXOC6BQ9Y2D4 811 aa11.18□□□□□ -0.62
SRGAP2B-204ENST00000612199 CHD1LQ86WJ1 897 aa11.18□□□□□ -0.62
SRGAP2B-204ENST00000612199 SSH1Q8WYL5 1049 aa11.18□□□□□ -0.62
SRGAP2B-204ENST00000612199 PTCD1O75127 700 aaKnown RBP11.18□□□□□ -0.62
SRGAP2B-204ENST00000612199 THOC2Q8NI27 1593 aaKnown RBP11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 SERPINA10Q9UK55 444 aa11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 SPG7Q9UQ90 795 aa11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 STK3Q13188 491 aa11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 CDK5RAP3Q96JB5 506 aa11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 CEBPZQ03701 1054 aaKnown RBP11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 GPS2Q13227 327 aa11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 CAVIN1Q6NZI2 390 aaKnown RBP11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 ACRBPQ8NEB7 543 aa11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 AMOTL2Q9Y2J4 779 aa11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 NASPP49321 788 aaPredicted RBP11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 MAP3K1Q13233 1512 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 GNAT3A8MTJ3 354 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 DUSP27Q5VZP5 1158 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 PRPF40AO75400 957 aaKnown RBP11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 ANKRD18AQ8IVF6 992 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 TBC1D2BQ9UPU7 963 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 TRMT1LQ7Z2T5 733 aaKnown RBP11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 NOS1P29475 1434 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 FIBPO43427 364 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 RPAP2Q8IXW5 612 aaPredicted RBP11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 SSX2IPQ9Y2D8 614 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 F6X3S4 739 aa11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 LIG1P18858 919 aa11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 AACSQ86V21 672 aa11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 SPINK5Q9NQ38 1064 aaPredicted RBP11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 DISP3Q9P2K9 1392 aa11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 LETM1O95202 739 aaPredicted RBP11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 CAGE1Q8TC20 777 aa11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 RARSP54136 660 aaKnown RBP11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 FKBP4Q02790 459 aaKnown RBP eCLIP11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 PTPRKQ15262 1439 aa11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 DESP17661 470 aa11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 SMARCA5O60264 1052 aaPredicted RBP11.15□□□□□ -0.63
SRGAP2B-204ENST00000612199 TTC39AQ5SRH9 613 aa11.15□□□□□ -0.63
SRGAP2B-204ENST00000612199 NUTM1Q86Y26 1132 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms