RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 ATP7BP35670 1465 aa10.74□□□□□ -0.69
SDF2-210ENST00000592250 BRINP3Q76B58 766 aa10.74□□□□□ -0.69
SDF2-210ENST00000592250 CDK19Q9BWU1 502 aa10.74□□□□□ -0.69
SDF2-210ENST00000592250 PRR36Q9H6K5 1346 aa10.74□□□□□ -0.69
SDF2-210ENST00000592250 NPC1L1Q9UHC9 1359 aa10.74□□□□□ -0.69
SDF2-210ENST00000592250 ORAI2Q96SN7 254 aa10.73□□□□□ -0.69
SDF2-210ENST00000592250 CARD14Q9BXL6 1004 aa10.73□□□□□ -0.69
SDF2-210ENST00000592250 AXIN2Q9Y2T1 843 aa10.73□□□□□ -0.69
SDF2-210ENST00000592250 TOPAZ1Q8N9V7 1692 aa10.73□□□□□ -0.69
SDF2-210ENST00000592250 NUTM2FA1L443 756 aa10.72□□□□□ -0.69
SDF2-210ENST00000592250 SPNS2Q8IVW8 549 aa10.72□□□□□ -0.69
SDF2-210ENST00000592250 SLC12A5Q9H2X9 1139 aa10.72□□□□□ -0.69
SDF2-210ENST00000592250 SPATA31A6Q5VVP1 1343 aa10.72□□□□□ -0.69
SDF2-210ENST00000592250 KTN1Q86UP2 1357 aaKnown RBP10.72□□□□□ -0.69
SDF2-210ENST00000592250 PARD3Q8TEW0 1356 aa10.72□□□□□ -0.69
SDF2-210ENST00000592250 NINLQ9Y2I6 1382 aa10.72□□□□□ -0.69
SDF2-210ENST00000592250 CD163L1Q9NR16 1453 aa10.72□□□□□ -0.69
SDF2-210ENST00000592250 NHSL1Q5SYE7 1610 aa10.72□□□□□ -0.69
SDF2-210ENST00000592250 AHDC1Q5TGY3 1603 aaPredicted RBP10.72□□□□□ -0.69
SDF2-210ENST00000592250 RGPD8O14715 1765 aaPredicted RBP10.72□□□□□ -0.69
SDF2-210ENST00000592250 KIF1AQ12756 1690 aa10.71□□□□□ -0.69
SDF2-210ENST00000592250 ESCO1Q5FWF5 840 aa10.71□□□□□ -0.69
SDF2-210ENST00000592250 PPP4R3BQ5MIZ7 849 aa10.71□□□□□ -0.69
SDF2-210ENST00000592250 ATAD2Q6PL18 1390 aa10.71□□□□□ -0.69
SDF2-210ENST00000592250 ZNF454Q8N9F8 522 aa10.71□□□□□ -0.69
SDF2-210ENST00000592250 NUDT16Q96DE0 195 aaKnown RBP10.71□□□□□ -0.69
SDF2-210ENST00000592250 COL16A1Q07092 1604 aaPredicted RBP10.7□□□□□ -0.7
SDF2-210ENST00000592250 FOSBP53539 338 aa10.7□□□□□ -0.7
SDF2-210ENST00000592250 SRPK2P78362 688 aaKnown RBP10.7□□□□□ -0.7
SDF2-210ENST00000592250 ITSN1Q15811 1721 aa10.7□□□□□ -0.7
SDF2-210ENST00000592250 ANKRD36BQ8N2N9 1353 aa10.69□□□□□ -0.7
SDF2-210ENST00000592250 AFF2P51816 1311 aa10.69□□□□□ -0.7
SDF2-210ENST00000592250 RALBP1Q15311 655 aa10.69□□□□□ -0.7
SDF2-210ENST00000592250 CCDC184Q52MB2 194 aa10.69□□□□□ -0.7
SDF2-210ENST00000592250 C8orf37Q96NL8 207 aa10.69□□□□□ -0.7
SDF2-210ENST00000592250 PLEKHG3A1L390 1219 aa10.68□□□□□ -0.7
SDF2-210ENST00000592250 PBX2P40425 430 aa10.68□□□□□ -0.7
SDF2-210ENST00000592250 DDX17Q92841 729 aaKnown RBP10.68□□□□□ -0.7
SDF2-210ENST00000592250 PXDNQ92626 1479 aa10.68□□□□□ -0.7
SDF2-210ENST00000592250 CPSF1Q10570 1443 aaKnown RBP10.67□□□□□ -0.7
SDF2-210ENST00000592250 PPIP5K1Q6PFW1 1433 aa10.67□□□□□ -0.7
SDF2-210ENST00000592250 POLR3AO14802 1390 aaPredicted RBP10.67□□□□□ -0.7
SDF2-210ENST00000592250 SOS2Q07890 1332 aaPredicted RBP10.67□□□□□ -0.7
SDF2-210ENST00000592250 ARHGAP33O14559 1287 aa10.67□□□□□ -0.7
SDF2-210ENST00000592250 FOXO3O43524 673 aa10.67□□□□□ -0.7
SDF2-210ENST00000592250 ANKRD13DQ6ZTN6 518 aa10.67□□□□□ -0.7
SDF2-210ENST00000592250 A0A1W2PP64 1363 aa10.66□□□□□ -0.7
SDF2-210ENST00000592250 NPHP3Q7Z494 1330 aa10.66□□□□□ -0.7
SDF2-210ENST00000592250 PSEN2P49810 448 aa10.66□□□□□ -0.7
SDF2-210ENST00000592250 HAP1P54257 671 aaPredicted RBP10.66□□□□□ -0.7
SDF2-210ENST00000592250 LSM11P83369 360 aaKnown RBP eCLIP10.66□□□□□ -0.7
SDF2-210ENST00000592250 PMFBP1Q8TBY8 1022 aa10.66□□□□□ -0.7
SDF2-210ENST00000592250 KNSTRNQ9Y448 316 aa10.66□□□□□ -0.7
SDF2-210ENST00000592250 ARIH1Q9Y4X5 557 aaPredicted RBP10.66□□□□□ -0.7
SDF2-210ENST00000592250 MYBBP1AQ9BQG0 1328 aaKnown RBP10.65□□□□□ -0.7
SDF2-210ENST00000592250 TMC1Q8TDI8 760 aa10.65□□□□□ -0.7
SDF2-210ENST00000592250 CABP1Q9NZU7 370 aa10.65□□□□□ -0.7
SDF2-210ENST00000592250 PCDHGA10Q9Y5H3 936 aa10.65□□□□□ -0.7
SDF2-210ENST00000592250 NSD3Q9BZ95 1437 aa10.65□□□□□ -0.7
SDF2-210ENST00000592250 ACEP12821 1306 aa10.64□□□□□ -0.71
SDF2-210ENST00000592250 ADAMTS2O95450 1211 aa10.64□□□□□ -0.71
SDF2-210ENST00000592250 PDIA6Q15084 440 aa10.64□□□□□ -0.71
SDF2-210ENST00000592250 DMRTA1Q5VZB9 504 aa10.64□□□□□ -0.71
SDF2-210ENST00000592250 QTRT2Q9H974 415 aaKnown RBP10.64□□□□□ -0.71
SDF2-210ENST00000592250 RGS12O14924 1447 aa10.64□□□□□ -0.71
SDF2-210ENST00000592250 TRPM3Q9HCF6 1732 aaPredicted RBP10.64□□□□□ -0.71
SDF2-210ENST00000592250 BRD4O60885 1362 aaPredicted RBP10.64□□□□□ -0.71
SDF2-210ENST00000592250 AKAP12Q02952 1782 aa10.63□□□□□ -0.71
SDF2-210ENST00000592250 MMRN1Q13201 1228 aa10.63□□□□□ -0.71
SDF2-210ENST00000592250 CC2D1BQ5T0F9 858 aaKnown RBP10.63□□□□□ -0.71
SDF2-210ENST00000592250 NGDNQ8NEJ9 315 aaKnown RBP10.63□□□□□ -0.71
SDF2-210ENST00000592250 ZDHHC16Q969W1 377 aa10.63□□□□□ -0.71
SDF2-210ENST00000592250 SSH2Q76I76 1423 aa10.63□□□□□ -0.71
SDF2-210ENST00000592250 SBNO1A3KN83 1393 aa10.63□□□□□ -0.71
SDF2-210ENST00000592250 MON2Q7Z3U7 1717 aa10.62□□□□□ -0.71
SDF2-210ENST00000592250 SPDYE16A6NNV3 312 aaPredicted RBP10.62□□□□□ -0.71
SDF2-210ENST00000592250 XPCQ01831 940 aaPredicted RBP10.62□□□□□ -0.71
SDF2-210ENST00000592250 PSME1Q06323 249 aa10.62□□□□□ -0.71
SDF2-210ENST00000592250 KRT28Q7Z3Y7 464 aa10.62□□□□□ -0.71
SDF2-210ENST00000592250 LRRC59Q96AG4 307 aaKnown RBP10.62□□□□□ -0.71
SDF2-210ENST00000592250 KCNK17Q96T54 332 aa10.62□□□□□ -0.71
SDF2-210ENST00000592250 ADAM33Q9BZ11 813 aa10.62□□□□□ -0.71
SDF2-210ENST00000592250 BCL2L12Q9HB09 334 aa10.62□□□□□ -0.71
SDF2-210ENST00000592250 TERF2IPQ9NYB0 399 aa10.62□□□□□ -0.71
SDF2-210ENST00000592250 SHPRHQ149N8 1683 aa10.62□□□□□ -0.71
SDF2-210ENST00000592250 NSD2O96028 1365 aa10.62□□□□□ -0.71
SDF2-210ENST00000592250 SPATA31A3Q5VYP0 1347 aa10.61□□□□□ -0.71
SDF2-210ENST00000592250 NRKQ7Z2Y5 1582 aa10.61□□□□□ -0.71
SDF2-210ENST00000592250 USP6P35125 1406 aa10.61□□□□□ -0.71
SDF2-210ENST00000592250 ALS2Q96Q42 1657 aa10.61□□□□□ -0.71
SDF2-210ENST00000592250 PHF14O94880 888 aa10.61□□□□□ -0.71
SDF2-210ENST00000592250 PPP2R1AP30153 589 aa10.61□□□□□ -0.71
SDF2-210ENST00000592250 PTGER2P43116 358 aa10.61□□□□□ -0.71
SDF2-210ENST00000592250 RBM6P78332 1123 aaKnown RBP10.61□□□□□ -0.71
SDF2-210ENST00000592250 NLRP13Q86W25 1043 aa10.61□□□□□ -0.71
SDF2-210ENST00000592250 PNISRQ8TF01 805 aaKnown RBP10.61□□□□□ -0.71
SDF2-210ENST00000592250 DDX12PQ92771 950 aa10.61□□□□□ -0.71
SDF2-210ENST00000592250 NGLY1Q96IV0 654 aa10.61□□□□□ -0.71
SDF2-210ENST00000592250 COL22A1Q8NFW1 1626 aaPredicted RBP10.61□□□□□ -0.71
SDF2-210ENST00000592250 CDK12Q9NYV4 1490 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms