RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 RPAP2Q8IXW5 612 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-217ENST00000581241 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
CSNK1D-217ENST00000581241 CTNNA3Q9UI47 895 aa17.06■□□□□ 0.32
CSNK1D-217ENST00000581241 CEP131Q9UPN4 1083 aa17.06■□□□□ 0.32
CSNK1D-217ENST00000581241 LRRFIP2Q9Y608 721 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-217ENST00000581241 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-217ENST00000581241 GPRASP1Q5JY77 1395 aa17.06■□□□□ 0.32
CSNK1D-217ENST00000581241 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-217ENST00000581241 GBP2P32456 591 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-217ENST00000581241 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
CSNK1D-217ENST00000581241 NUP133Q8WUM0 1156 aa17.06■□□□□ 0.32
CSNK1D-217ENST00000581241 MCM3P25205 808 aa17.05■□□□□ 0.32
CSNK1D-217ENST00000581241 ARHGAP29Q52LW3 1261 aa17.05■□□□□ 0.32
CSNK1D-217ENST00000581241 TAF4BQ92750 862 aa17.05■□□□□ 0.32
CSNK1D-217ENST00000581241 PRDM10Q9NQV6 1147 aa17.05■□□□□ 0.32
CSNK1D-217ENST00000581241 ANKRD30BQ9BXX2 1392 aa17.05■□□□□ 0.32
CSNK1D-217ENST00000581241 GIMAP7Q8NHV1 300 aa17.05■□□□□ 0.32
CSNK1D-217ENST00000581241 ZNF428Q96B54 188 aa17.05■□□□□ 0.32
CSNK1D-217ENST00000581241 HECW1Q76N89 1606 aa17.05■□□□□ 0.32
CSNK1D-217ENST00000581241 ZNF397Q8NF99 534 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-217ENST00000581241 CFAP100Q494V2 611 aa17.04■□□□□ 0.32
CSNK1D-217ENST00000581241 MAP9Q49MG5 647 aa17.04■□□□□ 0.32
CSNK1D-217ENST00000581241 SOGA3Q5TF21 947 aa17.04■□□□□ 0.32
CSNK1D-217ENST00000581241 WWC2Q6AWC2 1192 aa17.04■□□□□ 0.32
CSNK1D-217ENST00000581241 ABTB2Q8N961 1025 aa17.04■□□□□ 0.32
CSNK1D-217ENST00000581241 PDCL3Q9H2J4 239 aa17.04■□□□□ 0.32
CSNK1D-217ENST00000581241 TMEM57Q8N5G2 664 aa17.04■□□□□ 0.32
CSNK1D-217ENST00000581241 KIF18AQ8NI77 898 aa17.04■□□□□ 0.32
CSNK1D-217ENST00000581241 ANO10Q9NW15 660 aa17.04■□□□□ 0.32
CSNK1D-217ENST00000581241 CRACR2AQ9BSW2 395 aa17.04■□□□□ 0.32
CSNK1D-217ENST00000581241 ATF3P18847 181 aa17.03■□□□□ 0.32
CSNK1D-217ENST00000581241 SULT6B1Q6IMI4 303 aa17.03■□□□□ 0.32
CSNK1D-217ENST00000581241 PRAM1Q96QH2 718 aa17.03■□□□□ 0.32
CSNK1D-217ENST00000581241 C9orf84Q5VXU9 1444 aa17.03■□□□□ 0.32
CSNK1D-217ENST00000581241 CCDC184Q52MB2 194 aa17.03■□□□□ 0.32
CSNK1D-217ENST00000581241 ZHX3Q9H4I2 956 aa17.03■□□□□ 0.32
CSNK1D-217ENST00000581241 TIAM1Q13009 1591 aa17.03■□□□□ 0.32
CSNK1D-217ENST00000581241 PRKCSHP14314 528 aaPredicted RBP17.03■□□□□ 0.32
CSNK1D-217ENST00000581241 STK11IPQ8N1F8 1099 aa17.03■□□□□ 0.32
CSNK1D-217ENST00000581241 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
CSNK1D-217ENST00000581241 CDK19Q9BWU1 502 aa17.03■□□□□ 0.32
CSNK1D-217ENST00000581241 NKTRP30414 1462 aaKnown RBP17.02■□□□□ 0.32
CSNK1D-217ENST00000581241 SFPQP23246 707 aaKnown RBP eCLIP17.02■□□□□ 0.32
CSNK1D-217ENST00000581241 CALCOCO1Q9P1Z2 691 aa17.02■□□□□ 0.32
CSNK1D-217ENST00000581241 SEPT11Q9NVA2 429 aaKnown RBP17.02■□□□□ 0.32
CSNK1D-217ENST00000581241 CLIP2Q9UDT6 1046 aa17.02■□□□□ 0.32
CSNK1D-217ENST00000581241 SRGAP3O43295 1099 aa17.02■□□□□ 0.31
CSNK1D-217ENST00000581241 KIF5CO60282 957 aa17.01■□□□□ 0.31
CSNK1D-217ENST00000581241 XPCQ01831 940 aaPredicted RBP17.01■□□□□ 0.31
CSNK1D-217ENST00000581241 SLC26A8Q96RN1 970 aa17.01■□□□□ 0.31
CSNK1D-217ENST00000581241 EZRP15311 586 aaKnown RBP17.01■□□□□ 0.31
CSNK1D-217ENST00000581241 CCDC83Q8IWF9 413 aa17.01■□□□□ 0.31
CSNK1D-217ENST00000581241 RAB11FIP3O75154 756 aa17■□□□□ 0.31
CSNK1D-217ENST00000581241 FAM177BA6PVY3 158 aa17■□□□□ 0.31
CSNK1D-217ENST00000581241 SLC12A5Q9H2X9 1139 aa17■□□□□ 0.31
CSNK1D-217ENST00000581241 MCM5P33992 734 aa17■□□□□ 0.31
CSNK1D-217ENST00000581241 DHX37Q8IY37 1157 aaKnown RBP17■□□□□ 0.31
CSNK1D-217ENST00000581241 BMP2KQ9NSY1 1161 aaPredicted RBP17■□□□□ 0.31
CSNK1D-217ENST00000581241 TATP17735 454 aaPredicted RBP17■□□□□ 0.31
CSNK1D-217ENST00000581241 NEMFO60524 1076 aa16.99■□□□□ 0.31
CSNK1D-217ENST00000581241 IMMTQ16891 758 aaKnown RBP16.99■□□□□ 0.31
CSNK1D-217ENST00000581241 TNPO1Q92973 898 aaKnown RBP16.99■□□□□ 0.31
CSNK1D-217ENST00000581241 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-217ENST00000581241 FKBP4Q02790 459 aaKnown RBP eCLIP16.99■□□□□ 0.315e-7■□□□□ 8.6
CSNK1D-217ENST00000581241 NUTM1Q86Y26 1132 aa16.99■□□□□ 0.31
CSNK1D-217ENST00000581241 SPA17Q15506 151 aa16.99■□□□□ 0.31
CSNK1D-217ENST00000581241 SH2B1Q9NRF2 756 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-217ENST00000581241 CTAGE5O15320 804 aa16.99■□□□□ 0.31
CSNK1D-217ENST00000581241 DDX11Q96FC9 970 aa16.99■□□□□ 0.31
CSNK1D-217ENST00000581241 UBAC1Q9BSL1 405 aa16.99■□□□□ 0.31
CSNK1D-217ENST00000581241 RBM42Q9BTD8 480 aaKnown RBP16.99■□□□□ 0.31
CSNK1D-217ENST00000581241 SCAND2PQ9GZW5 306 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-217ENST00000581241 POTEB2H3BUK9 544 aa16.98■□□□□ 0.31
CSNK1D-217ENST00000581241 TNNT1P13805 278 aa16.98■□□□□ 0.31
CSNK1D-217ENST00000581241 SSFA2P28290 1259 aa16.98■□□□□ 0.31
CSNK1D-217ENST00000581241 MEX3CQ5U5Q3 659 aaKnown RBP16.98■□□□□ 0.31
CSNK1D-217ENST00000581241 FCHSD2O94868 740 aa16.98■□□□□ 0.31
CSNK1D-217ENST00000581241 IL1RAPL2Q9NP60 686 aa16.98■□□□□ 0.31
CSNK1D-217ENST00000581241 MX1P20591 662 aa16.98■□□□□ 0.31
CSNK1D-217ENST00000581241 CABP4P57796 275 aa16.97■□□□□ 0.31
CSNK1D-217ENST00000581241 MICALCLQ6ZW33 695 aa16.97■□□□□ 0.31
CSNK1D-217ENST00000581241 FAM107BQ9H098 131 aa16.97■□□□□ 0.31
CSNK1D-217ENST00000581241 URI1O94763 535 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-217ENST00000581241 TOP1P11387 765 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-217ENST00000581241 SYNJ2O15056 1496 aa16.97■□□□□ 0.31
CSNK1D-217ENST00000581241 NFE2L2Q16236 605 aa16.97■□□□□ 0.31
CSNK1D-217ENST00000581241 DAPK1P53355 1430 aa16.97■□□□□ 0.31
CSNK1D-217ENST00000581241 MAP2K1Q02750 393 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-217ENST00000581241 ALDH1L2Q3SY69 923 aa16.97■□□□□ 0.31
CSNK1D-217ENST00000581241 TDO2P48775 406 aa16.97■□□□□ 0.31
CSNK1D-217ENST00000581241 NSD3Q9BZ95 1437 aa16.96■□□□□ 0.31
CSNK1D-217ENST00000581241 TBC1D2Q9BYX2 928 aa16.96■□□□□ 0.31
CSNK1D-217ENST00000581241 MYL6BP14649 208 aa16.96■□□□□ 0.31
CSNK1D-217ENST00000581241 PPP4R3BQ5MIZ7 849 aa16.96■□□□□ 0.31
CSNK1D-217ENST00000581241 CABP1Q9NZU7 370 aa16.96■□□□□ 0.31
CSNK1D-217ENST00000581241 CCDC91Q7Z6B0 441 aa16.96■□□□□ 0.3
CSNK1D-217ENST00000581241 KRI1Q8N9T8 703 aaKnown RBP16.96■□□□□ 0.3
CSNK1D-217ENST00000581241 TMPOP42166 694 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-217ENST00000581241 PRPF40BQ6NWY9 871 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-217ENST00000581241 ATP2B2Q01814 1243 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms