RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 TRPM2O94759 1503 aa11.19□□□□□ -0.62
SMG1-214ENST00000568038 CLSPNQ9HAW4 1339 aa11.19□□□□□ -0.62
SMG1-214ENST00000568038 FMNL1O95466 1100 aaPredicted RBP11.19□□□□□ -0.62
SMG1-214ENST00000568038 LAPTM4AQ15012 233 aa11.19□□□□□ -0.62
SMG1-214ENST00000568038 GRIPAP1Q4V328 841 aa11.19□□□□□ -0.62
SMG1-214ENST00000568038 SLC52A1Q9NWF4 448 aa11.19□□□□□ -0.62
SMG1-214ENST00000568038 CLTCL1P53675 1640 aa11.18□□□□□ -0.62
SMG1-214ENST00000568038 EMID1Q96A84 441 aaPredicted RBP11.18□□□□□ -0.62
SMG1-214ENST00000568038 PDZRN3Q9UPQ7 1066 aa11.18□□□□□ -0.62
SMG1-214ENST00000568038 RGL3Q3MIN7 710 aa11.17□□□□□ -0.62
SMG1-214ENST00000568038 LIAT1Q6ZQX7 453 aa11.17□□□□□ -0.62
SMG1-214ENST00000568038 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
SMG1-214ENST00000568038 THAP11Q96EK4 314 aa11.16□□□□□ -0.62
SMG1-214ENST00000568038 GPCPD1Q9NPB8 672 aa11.16□□□□□ -0.62
SMG1-214ENST00000568038 KDM4AO75164 1064 aa11.15□□□□□ -0.62
SMG1-214ENST00000568038 CLCN1P35523 988 aa11.15□□□□□ -0.62
SMG1-214ENST00000568038 ZNF326Q5BKZ1 582 aaKnown RBP11.15□□□□□ -0.62
SMG1-214ENST00000568038 RNF19BQ6ZMZ0 732 aa11.15□□□□□ -0.62
SMG1-214ENST00000568038 SETD1BQ9UPS6 1966 aaKnown RBP11.14□□□□□ -0.63
SMG1-214ENST00000568038 NLRP1Q9C000 1473 aa11.14□□□□□ -0.63
SMG1-214ENST00000568038 PIK3C2BO00750 1634 aa11.14□□□□□ -0.63
SMG1-214ENST00000568038 NRG2O14511 850 aaPredicted RBP11.14□□□□□ -0.63
SMG1-214ENST00000568038 PLA2G2CQ5R387 149 aa11.14□□□□□ -0.63
SMG1-214ENST00000568038 SPRYD7Q5W111 196 aa11.14□□□□□ -0.63
SMG1-214ENST00000568038 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
SMG1-214ENST00000568038 FAM160A2Q8N612 972 aaPredicted RBP11.14□□□□□ -0.63
SMG1-214ENST00000568038 ZMYND10O75800 440 aa11.13□□□□□ -0.63
SMG1-214ENST00000568038 BRICD5Q6PL45 260 aa11.13□□□□□ -0.63
SMG1-214ENST00000568038 HLA-CQ95604 372 aa11.13□□□□□ -0.63
SMG1-214ENST00000568038 PRDM9Q9NQV7 894 aa11.13□□□□□ -0.63
SMG1-214ENST00000568038 TONSLQ96HA7 1378 aa11.13□□□□□ -0.63
SMG1-214ENST00000568038 KIF1BO60333 1816 aa11.12□□□□□ -0.63
SMG1-214ENST00000568038 UHRF1BP1Q6BDS2 1440 aa11.12□□□□□ -0.63
SMG1-214ENST00000568038 L3MBTL2Q969R5 705 aa11.12□□□□□ -0.63
SMG1-214ENST00000568038 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
SMG1-214ENST00000568038 MYO3AQ8NEV4 1616 aa11.12□□□□□ -0.63
SMG1-214ENST00000568038 A2ML1A8K2U0 1454 aa11.12□□□□□ -0.63
SMG1-214ENST00000568038 SPATA31E1Q6ZUB1 1445 aa11.11□□□□□ -0.63
SMG1-214ENST00000568038 ZNF697Q5TEC3 545 aa11.11□□□□□ -0.63
SMG1-214ENST00000568038 NUTM2DQ5VT03 806 aaPredicted RBP11.11□□□□□ -0.63
SMG1-214ENST00000568038 ZNF598Q86UK7 904 aaKnown RBP11.11□□□□□ -0.63
SMG1-214ENST00000568038 DCAF11Q8TEB1 546 aa11.11□□□□□ -0.63
SMG1-214ENST00000568038 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
SMG1-214ENST00000568038 FCF1Q9Y324 198 aaKnown RBP11.11□□□□□ -0.63
SMG1-214ENST00000568038 ADGRB3O60242 1522 aa11.1□□□□□ -0.63
SMG1-214ENST00000568038 TMEM131LA2VDJ0 1609 aa11.1□□□□□ -0.63
SMG1-214ENST00000568038 MYO5BQ9ULV0 1848 aa11.1□□□□□ -0.63
SMG1-214ENST00000568038 TTLL12Q14166 644 aaPredicted RBP11.1□□□□□ -0.63
SMG1-214ENST00000568038 Q3C1V9 767 aa11.1□□□□□ -0.63
SMG1-214ENST00000568038 NUTM1Q86Y26 1132 aa11.1□□□□□ -0.63
SMG1-214ENST00000568038 THEMISQ8N1K5 641 aaPredicted RBP11.1□□□□□ -0.63
SMG1-214ENST00000568038 CEP170BQ9Y4F5 1589 aaPredicted RBP11.1□□□□□ -0.63
SMG1-214ENST00000568038 TRAF7Q6Q0C0 670 aa11.09□□□□□ -0.63
SMG1-214ENST00000568038 SALL2Q9Y467 1007 aaPredicted RBP11.09□□□□□ -0.63
SMG1-214ENST00000568038 UBR1Q8IWV7 1749 aa11.09□□□□□ -0.63
SMG1-214ENST00000568038 SSTR3P32745 418 aaPredicted RBP11.08□□□□□ -0.64
SMG1-214ENST00000568038 HSPA2P54652 639 aa11.08□□□□□ -0.64
SMG1-214ENST00000568038 GUCA2AQ02747 115 aa11.08□□□□□ -0.64
SMG1-214ENST00000568038 TRIM67Q6ZTA4 783 aa11.08□□□□□ -0.64
SMG1-214ENST00000568038 RPGRIP1LQ68CZ1 1315 aa11.08□□□□□ -0.64
SMG1-214ENST00000568038 TMEM2Q9UHN6 1383 aa11.07□□□□□ -0.64
SMG1-214ENST00000568038 USP46P62068 366 aa11.07□□□□□ -0.64
SMG1-214ENST00000568038 TXNDC2Q86VQ3 553 aa11.07□□□□□ -0.64
SMG1-214ENST00000568038 TIMELESSQ9UNS1 1208 aa11.07□□□□□ -0.64
SMG1-214ENST00000568038 RIMS2Q9UQ26 1411 aa11.07□□□□□ -0.64
SMG1-214ENST00000568038 ZNF142P52746 1687 aaPredicted RBP11.07□□□□□ -0.64
SMG1-214ENST00000568038 TNFRSF10AO00220 468 aa11.06□□□□□ -0.64
SMG1-214ENST00000568038 HOXA2O43364 376 aa11.06□□□□□ -0.64
SMG1-214ENST00000568038 PPP1R15AO75807 674 aaPredicted RBP11.06□□□□□ -0.64
SMG1-214ENST00000568038 FOXC1Q12948 553 aa11.06□□□□□ -0.64
SMG1-214ENST00000568038 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMG1-214ENST00000568038 EID1Q9Y6B2 187 aa11.06□□□□□ -0.64
SMG1-214ENST00000568038 NEURL4Q96JN8 1562 aa11.06□□□□□ -0.64
SMG1-214ENST00000568038 KDM5AP29375 1690 aaKnown RBP11.05□□□□□ -0.64
SMG1-214ENST00000568038 LCE2BO14633 110 aa11.05□□□□□ -0.64
SMG1-214ENST00000568038 LTKP29376 864 aa11.05□□□□□ -0.64
SMG1-214ENST00000568038 USB1Q9BQ65 265 aaKnown RBP11.05□□□□□ -0.64
SMG1-214ENST00000568038 ADGRF5Q8IZF2 1346 aa11.05□□□□□ -0.64
SMG1-214ENST00000568038 NEXMIFQ5QGS0 1516 aa11.04□□□□□ -0.64
SMG1-214ENST00000568038 ZFYVE9O95405 1425 aa11.04□□□□□ -0.64
SMG1-214ENST00000568038 ZEB1P37275 1124 aaPredicted RBP11.04□□□□□ -0.64
SMG1-214ENST00000568038 MSS51Q4VC12 460 aa11.04□□□□□ -0.64
SMG1-214ENST00000568038 ANKLE2Q86XL3 938 aa11.04□□□□□ -0.64
SMG1-214ENST00000568038 BCANQ96GW7 911 aa11.04□□□□□ -0.64
SMG1-214ENST00000568038 LMTK3Q96Q04 1460 aa11.04□□□□□ -0.64
SMG1-214ENST00000568038 ZBTB24O43167 697 aaPredicted RBP11.03□□□□□ -0.64
SMG1-214ENST00000568038 NBPF8Q3BBV2 869 aa11.03□□□□□ -0.64
SMG1-214ENST00000568038 SYMPKQ92797 1274 aaKnown RBP11.03□□□□□ -0.64
SMG1-214ENST00000568038 ARHGAP23Q9P227 1491 aa11.03□□□□□ -0.64
SMG1-214ENST00000568038 SLIT1O75093 1534 aa11.03□□□□□ -0.64
SMG1-214ENST00000568038 PPLO60437 1756 aa11.03□□□□□ -0.64
SMG1-214ENST00000568038 CD2BP2O95400 341 aaKnown RBP11.02□□□□□ -0.65
SMG1-214ENST00000568038 SCAF11Q99590 1463 aaKnown RBP11.01□□□□□ -0.65
SMG1-214ENST00000568038 RPIAP49247 311 aa11.01□□□□□ -0.65
SMG1-214ENST00000568038 GIGYF2Q6Y7W6 1299 aaKnown RBP11.01□□□□□ -0.65
SMG1-214ENST00000568038 CCDC24Q8N4L8 307 aa11.01□□□□□ -0.65
SMG1-214ENST00000568038 IFT172Q9UG01 1749 aa11.01□□□□□ -0.65
SMG1-214ENST00000568038 MYOM2P54296 1465 aa11□□□□□ -0.65
SMG1-214ENST00000568038 GDF9O60383 454 aa11□□□□□ -0.65
SMG1-214ENST00000568038 AMHR2Q16671 573 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms