RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 KRT85P78386 507 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 KRT32Q14532 448 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 FOXD4L5Q5VV16 416 aaPredicted RBP5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 FOXD4L4Q8WXT5 416 aaPredicted RBP5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 TSPYL1Q9H0U9 437 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 TOMM22Q9NS69 142 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 MINK1Q8N4C8 1332 aaPredicted RBP5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 NSD2O96028 1365 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 CAVIN2O95810 425 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 NEK4P51957 841 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 CCAR2Q8N163 923 aaKnown RBP5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 SDF4Q9BRK5 362 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 NOL10Q9BSC4 688 aaKnown RBP5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 TRIM5Q9C035 493 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 NKTRP30414 1462 aaKnown RBP5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 EFCAB6Q5THR3 1501 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 CHD1LQ86WJ1 897 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 KCNH5Q8NCM2 988 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 PRDM11Q9NQV5 511 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 ERLIN1O75477 346 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 ADGRL2O95490 1459 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 SART3Q15020 963 aaKnown RBP5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 TWISTNBQ3B726 338 aaPredicted RBP5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 CFAP45Q9UL16 551 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 PLEKHG1Q9ULL1 1385 aa5.18□□□□□ -1.58
LPCAT2-208ENST00000566915 EIF3JO75822 258 aaKnown RBP5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 NBPF8Q3BBV2 869 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 CDCA7LQ96GN5 454 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 LUC7LQ9NQ29 371 aaKnown RBP5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 PHF8Q9UPP1 1060 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 USP8P40818 1118 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 EXOSC9Q06265 439 aaKnown RBP5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 CCDC112Q8NEF3 446 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 ARID3AQ99856 593 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 CYP46A1Q9Y6A2 500 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 ARHGAP31Q2M1Z3 1444 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 NEMFO60524 1076 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 PRPF40AO75400 957 aaKnown RBP5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 NBPF14Q5TI25 921 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 DNMT1P26358 1616 aaKnown RBP5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 PES1O00541 588 aaKnown RBP5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 LEKR1Q6ZMV7 388 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 ARHGEF12Q9NZN5 1544 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 PLA2R1Q13018 1463 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 NUTM2FA1L443 756 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 CLSTN1O94985 981 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 RDXP35241 583 aaKnown RBP5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 LRRCC1Q9C099 1032 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 CPS1P31327 1500 aa5.17□□□□□ -1.58
LPCAT2-208ENST00000566915 ERVK-7P63135 1459 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 MAST1Q9Y2H9 1570 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 IQCEQ6IPM2 695 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 UVSSAQ2YD98 709 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 GBP3Q9H0R5 595 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 EIF2AK4Q9P2K8 1649 aaKnown RBP5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 SMTNL1A8MU46 457 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 TULP1O00294 542 aaPredicted RBP5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 PDCL3Q9H2J4 239 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 SLAIN2Q9P270 581 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 BRPF3Q9ULD4 1205 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 KDM5CP41229 1560 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 IL16Q14005 1332 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 REREQ9P2R6 1566 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 CDKL5O76039 1030 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 TXLNAP40222 546 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 CREBRFQ8IUR6 639 aa5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 CDCA7Q9BWT1 371 aaPredicted RBP5.16□□□□□ -1.58
LPCAT2-208ENST00000566915 ARHGEF10O15013 1369 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 RAB11FIP3O75154 756 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 NFXL1Q6ZNB6 911 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 KRT28Q7Z3Y7 464 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 CEP57L1Q8IYX8 460 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 ABTB2Q8N961 1025 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 PCMTD1Q96MG8 357 aaPredicted RBP5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 PRAM1Q96QH2 718 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 FSD1Q9BTV5 496 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 SH2B1Q9NRF2 756 aaPredicted RBP5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 INSRP06213 1382 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 TRPM2O94759 1503 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 CTAGE5O15320 804 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 SURF6O75683 361 aaKnown RBP5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 TUBB4AP04350 444 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 GTF2E1P29083 439 aaPredicted RBP5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 PRKAR2BP31323 418 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 PLEKHO1Q53GL0 409 aaPredicted RBP5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 RAPGEF4Q8WZA2 1011 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 TNMDQ9H2S6 317 aa5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 NOB1Q9ULX3 412 aaKnown RBP5.15□□□□□ -1.58
LPCAT2-208ENST00000566915 DIP2CQ9Y2E4 1556 aa5.15□□□□□ -1.59
LPCAT2-208ENST00000566915 ZSCAN25Q6NSZ9 544 aa5.15□□□□□ -1.59
LPCAT2-208ENST00000566915 CCDC191Q8NCU4 936 aa5.15□□□□□ -1.59
LPCAT2-208ENST00000566915 SCAND2PQ9GZW5 306 aaPredicted RBP5.15□□□□□ -1.59
LPCAT2-208ENST00000566915 PPP1R1BQ9UD71 204 aaPredicted RBP5.15□□□□□ -1.59
LPCAT2-208ENST00000566915 CTNNA3Q9UI47 895 aa5.15□□□□□ -1.59
LPCAT2-208ENST00000566915 TBC1D2BQ9UPU7 963 aa5.15□□□□□ -1.59
LPCAT2-208ENST00000566915 PLXNC1O60486 1568 aa5.15□□□□□ -1.59
LPCAT2-208ENST00000566915 MCM3P25205 808 aa5.15□□□□□ -1.59
LPCAT2-208ENST00000566915 RXRBP28702 533 aa5.15□□□□□ -1.59
LPCAT2-208ENST00000566915 ZNF330Q9Y3S2 320 aaPredicted RBP5.15□□□□□ -1.59
LPCAT2-208ENST00000566915 ADAMTS2O95450 1211 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms