RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 CHMP4BQ9H444 224 aaKnown RBP23.55■■□□□ 1.36
MSLN-207ENST00000566549 IGSF1Q8N6C5 1336 aa23.54■■□□□ 1.36
MSLN-207ENST00000566549 CRB1P82279 1406 aa23.54■■□□□ 1.36
MSLN-207ENST00000566549 HOXC9P31274 260 aa23.53■■□□□ 1.36
MSLN-207ENST00000566549 TSPYL4Q9UJ04 414 aa23.53■■□□□ 1.36
MSLN-207ENST00000566549 PLEKHG5O94827 1062 aa23.52■■□□□ 1.36
MSLN-207ENST00000566549 NFKBIBQ15653 356 aa23.52■■□□□ 1.36
MSLN-207ENST00000566549 PHF8Q9UPP1 1060 aa23.52■■□□□ 1.36
MSLN-207ENST00000566549 KDRP35968 1356 aa23.51■■□□□ 1.35
MSLN-207ENST00000566549 USHBP1Q8N6Y0 703 aa23.5■■□□□ 1.35
MSLN-207ENST00000566549 ZBTB7CA1YPR0 619 aa23.5■■□□□ 1.35
MSLN-207ENST00000566549 SLC4A2P04920 1241 aa23.5■■□□□ 1.35
MSLN-207ENST00000566549 GCC1Q96CN9 775 aa23.5■■□□□ 1.35
MSLN-207ENST00000566549 USP35Q9P2H5 1018 aa23.5■■□□□ 1.35
MSLN-207ENST00000566549 FMN2Q9NZ56 1722 aa23.49■■□□□ 1.35
MSLN-207ENST00000566549 BECN1Q14457 450 aa23.49■■□□□ 1.35
MSLN-207ENST00000566549 KIAA0232Q92628 1395 aa23.49■■□□□ 1.35
MSLN-207ENST00000566549 HAP1P54257 671 aaPredicted RBP23.49■■□□□ 1.35
MSLN-207ENST00000566549 GAS2L2Q8NHY3 880 aa23.49■■□□□ 1.35
MSLN-207ENST00000566549 ESCO1Q5FWF5 840 aa23.48■■□□□ 1.35
MSLN-207ENST00000566549 SLKQ9H2G2 1235 aaPredicted RBP23.48■■□□□ 1.35
MSLN-207ENST00000566549 C22orf23Q9BZE7 217 aa23.47■■□□□ 1.35
MSLN-207ENST00000566549 RGS12O14924 1447 aa23.47■■□□□ 1.35
MSLN-207ENST00000566549 INTS3Q68E01 1043 aaKnown RBP23.46■■□□□ 1.35
MSLN-207ENST00000566549 MSH6P52701 1360 aa23.45■■□□□ 1.34
MSLN-207ENST00000566549 G2E3Q7L622 706 aa23.44■■□□□ 1.34
MSLN-207ENST00000566549 PSME1Q06323 249 aa23.44■■□□□ 1.34
MSLN-207ENST00000566549 NECTIN2Q92692 538 aa23.44■■□□□ 1.34
MSLN-207ENST00000566549 SLC4A10Q6U841 1118 aa23.43■■□□□ 1.34
MSLN-207ENST00000566549 TBC1D2Q9BYX2 928 aa23.43■■□□□ 1.34
MSLN-207ENST00000566549 GNAT3A8MTJ3 354 aa23.43■■□□□ 1.34
MSLN-207ENST00000566549 F6X3S4 739 aa23.43■■□□□ 1.34
MSLN-207ENST00000566549 XPCQ01831 940 aaPredicted RBP23.43■■□□□ 1.34
MSLN-207ENST00000566549 MEIS3Q99687 375 aa23.42■■□□□ 1.34
MSLN-207ENST00000566549 FRAT2O75474 233 aaPredicted RBP23.42■■□□□ 1.34
MSLN-207ENST00000566549 SPRYD3Q8NCJ5 442 aa23.42■■□□□ 1.34
MSLN-207ENST00000566549 PTPRCP08575 1304 aa23.41■■□□□ 1.34
MSLN-207ENST00000566549 KIF24Q5T7B8 1368 aa23.4■■□□□ 1.34
MSLN-207ENST00000566549 APBB1O00213 710 aa23.4■■□□□ 1.34
MSLN-207ENST00000566549 BMP2KLQ5H9B9 411 aa23.4■■□□□ 1.34
MSLN-207ENST00000566549 MARF1Q9Y4F3 1742 aaKnown RBP23.39■■□□□ 1.34
MSLN-207ENST00000566549 IL17REQ8NFR9 667 aa23.39■■□□□ 1.34
MSLN-207ENST00000566549 NWD1Q149M9 1564 aa23.38■■□□□ 1.33
MSLN-207ENST00000566549 ORAI2Q96SN7 254 aa23.38■■□□□ 1.33
MSLN-207ENST00000566549 CEP85Q6P2H3 762 aa23.38■■□□□ 1.33
MSLN-207ENST00000566549 ATP10DQ9P241 1426 aa23.37■■□□□ 1.33
MSLN-207ENST00000566549 LMOD2Q6P5Q4 547 aa23.37■■□□□ 1.33
MSLN-207ENST00000566549 ANKRD44Q8N8A2 993 aa23.37■■□□□ 1.33
MSLN-207ENST00000566549 CHD2O14647 1828 aaKnown RBP23.37■■□□□ 1.33
MSLN-207ENST00000566549 MAP3K5Q99683 1374 aa23.37■■□□□ 1.33
MSLN-207ENST00000566549 STK31Q9BXU1 1019 aa23.37■■□□□ 1.33
MSLN-207ENST00000566549 RTL1A6NKG5 1358 aa23.36■■□□□ 1.33
MSLN-207ENST00000566549 ADGRL3Q9HAR2 1447 aa23.36■■□□□ 1.33
MSLN-207ENST00000566549 C16orf71Q8IYS4 520 aaPredicted RBP23.36■■□□□ 1.33
MSLN-207ENST00000566549 DCTPP1Q9H773 170 aa23.36■■□□□ 1.33
MSLN-207ENST00000566549 HTATSF1O43719 755 aaKnown RBP23.35■■□□□ 1.33
MSLN-207ENST00000566549 NBPF6Q5VWK0 638 aa23.35■■□□□ 1.33
MSLN-207ENST00000566549 NBPF4Q96M43 638 aa23.35■■□□□ 1.33
MSLN-207ENST00000566549 IP6K1Q92551 441 aa23.35■■□□□ 1.33
MSLN-207ENST00000566549 LRRC59Q96AG4 307 aaKnown RBP23.33■■□□□ 1.33
MSLN-207ENST00000566549 NPHP4O75161 1426 aaPredicted RBP23.33■■□□□ 1.33
MSLN-207ENST00000566549 SMARCA5O60264 1052 aaPredicted RBP23.33■■□□□ 1.33
MSLN-207ENST00000566549 RPAP2Q8IXW5 612 aaPredicted RBP23.33■■□□□ 1.33
MSLN-207ENST00000566549 FKBP5Q13451 457 aaPredicted RBP23.32■■□□□ 1.32
MSLN-207ENST00000566549 TBC1D9Q6ZT07 1266 aa23.32■■□□□ 1.32
MSLN-207ENST00000566549 OTUD7AQ8TE49 926 aaPredicted RBP23.32■■□□□ 1.32
MSLN-207ENST00000566549 PLEKHM2Q8IWE5 1019 aa23.32■■□□□ 1.32
MSLN-207ENST00000566549 GSPT1P15170 499 aaKnown RBP23.31■■□□□ 1.32
MSLN-207ENST00000566549 FLIIQ13045 1269 aa23.31■■□□□ 1.32
MSLN-207ENST00000566549 TAF7Q15545 349 aaPredicted RBP23.31■■□□□ 1.32
MSLN-207ENST00000566549 ZNF142P52746 1687 aaPredicted RBP23.31■■□□□ 1.32
MSLN-207ENST00000566549 CCDC30Q5VVM6 783 aa23.31■■□□□ 1.32
MSLN-207ENST00000566549 ANTXR1Q9H6X2 564 aa23.3■■□□□ 1.32
MSLN-207ENST00000566549 CCT4P50991 539 aaKnown RBP23.29■■□□□ 1.32
MSLN-207ENST00000566549 KCNH5Q8NCM2 988 aa23.29■■□□□ 1.32
MSLN-207ENST00000566549 NFAT5O94916 1531 aa23.28■■□□□ 1.32
MSLN-207ENST00000566549 LGR6Q9HBX8 967 aa23.28■■□□□ 1.32
MSLN-207ENST00000566549 ADAMTSL3P82987 1691 aa23.28■■□□□ 1.32
MSLN-207ENST00000566549 USP54Q70EL1 1684 aa23.27■■□□□ 1.32
MSLN-207ENST00000566549 LTN1O94822 1766 aa23.27■■□□□ 1.32
MSLN-207ENST00000566549 RBM25P49756 843 aaKnown RBP23.27■■□□□ 1.32
MSLN-207ENST00000566549 LRRC37A3O60309 1634 aa23.27■■□□□ 1.32
MSLN-207ENST00000566549 GCP02774 474 aa23.27■■□□□ 1.31
MSLN-207ENST00000566549 PROSER2Q86WR7 435 aaPredicted RBP23.26■■□□□ 1.31
MSLN-207ENST00000566549 HSCBQ8IWL3 235 aa23.25■■□□□ 1.31
MSLN-207ENST00000566549 CDC45O75419 566 aa23.25■■□□□ 1.31
MSLN-207ENST00000566549 HDGFL1Q5TGJ6 251 aa23.25■■□□□ 1.31
MSLN-207ENST00000566549 SETD1BQ9UPS6 1966 aaKnown RBP23.25■■□□□ 1.31
MSLN-207ENST00000566549 EIF2S2P20042 333 aaKnown RBP23.24■■□□□ 1.31
MSLN-207ENST00000566549 GSE1Q14687 1217 aa23.24■■□□□ 1.31
MSLN-207ENST00000566549 TTC22Q5TAA0 569 aa23.24■■□□□ 1.31
MSLN-207ENST00000566549 PHAXQ9H814 394 aaKnown RBP23.23■■□□□ 1.31
MSLN-207ENST00000566549 GNAI2P04899 355 aa23.23■■□□□ 1.31
MSLN-207ENST00000566549 ZNF530Q6P9A1 599 aaPredicted RBP23.23■■□□□ 1.31
MSLN-207ENST00000566549 HMMRO75330 724 aa23.22■■□□□ 1.31
MSLN-207ENST00000566549 MPRIPQ6WCQ1 1025 aa23.22■■□□□ 1.31
MSLN-207ENST00000566549 EXOC6BQ9Y2D4 811 aa23.22■■□□□ 1.31
MSLN-207ENST00000566549 KCNQ3O43525 872 aa23.21■■□□□ 1.31
MSLN-207ENST00000566549 ARHGEF25Q86VW2 580 aa23.21■■□□□ 1.31
MSLN-207ENST00000566549 KRT28Q7Z3Y7 464 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 317.8 ms