RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TNRQ92752 1358 aa16.22■□□□□ 0.19
USB1-207ENST00000563149 ATP10DQ9P241 1426 aa16.22■□□□□ 0.19
USB1-207ENST00000563149 MLECQ14165 292 aa16.21■□□□□ 0.19
USB1-207ENST00000563149 DCTN1Q14203 1278 aa16.21■□□□□ 0.19
USB1-207ENST00000563149 TMEM2Q9UHN6 1383 aa16.21■□□□□ 0.19
USB1-207ENST00000563149 NCKAP5LQ9HCH0 1330 aa16.21■□□□□ 0.19
USB1-207ENST00000563149 GZF1Q9H116 711 aaPredicted RBP16.21■□□□□ 0.18
USB1-207ENST00000563149 UBR1Q8IWV7 1749 aa16.2■□□□□ 0.18
USB1-207ENST00000563149 CEP85Q6P2H3 762 aa16.2■□□□□ 0.18
USB1-207ENST00000563149 USP6P35125 1406 aa16.2■□□□□ 0.18
USB1-207ENST00000563149 RTL1A6NKG5 1358 aa16.19■□□□□ 0.18
USB1-207ENST00000563149 ARHGEF10O15013 1369 aa16.19■□□□□ 0.18
USB1-207ENST00000563149 CASC1Q6TDU7 716 aa16.19■□□□□ 0.18
USB1-207ENST00000563149 GRPEL1Q9HAV7 217 aa16.19■□□□□ 0.18
USB1-207ENST00000563149 ACEP12821 1306 aa16.19■□□□□ 0.18
USB1-207ENST00000563149 ROBO2Q9HCK4 1378 aa16.19■□□□□ 0.18
USB1-207ENST00000563149 GOLGA6L22H0YM25 854 aa16.18■□□□□ 0.18
USB1-207ENST00000563149 AEBP1Q8IUX7 1158 aa16.18■□□□□ 0.18
USB1-207ENST00000563149 CRB1P82279 1406 aa16.18■□□□□ 0.18
USB1-207ENST00000563149 ADAMTS13Q76LX8 1427 aa16.18■□□□□ 0.18
USB1-207ENST00000563149 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.18■□□□□ 0.18
USB1-207ENST00000563149 CD2BP2O95400 341 aaKnown RBP16.18■□□□□ 0.18
USB1-207ENST00000563149 USP26Q9BXU7 913 aa16.18■□□□□ 0.18
USB1-207ENST00000563149 TTC21AQ8NDW8 1320 aa16.17■□□□□ 0.18
USB1-207ENST00000563149 PLEKHG1Q9ULL1 1385 aa16.17■□□□□ 0.18
USB1-207ENST00000563149 HMMRO75330 724 aa16.17■□□□□ 0.18
USB1-207ENST00000563149 PEAK1Q9H792 1746 aa16.17■□□□□ 0.18
USB1-207ENST00000563149 SSH2Q76I76 1423 aa16.16■□□□□ 0.18
USB1-207ENST00000563149 MSH6P52701 1360 aa16.16■□□□□ 0.18
USB1-207ENST00000563149 NUCB2P80303 420 aa16.15■□□□□ 0.18
USB1-207ENST00000563149 GAS2L2Q8NHY3 880 aa16.15■□□□□ 0.18
USB1-207ENST00000563149 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
USB1-207ENST00000563149 RRAGDQ9NQL2 400 aaPredicted RBP16.15■□□□□ 0.18
USB1-207ENST00000563149 CCT4P50991 539 aaKnown RBP16.15■□□□□ 0.18
USB1-207ENST00000563149 MCM10Q7L590 875 aa16.15■□□□□ 0.18
USB1-207ENST00000563149 OSBPL3Q9H4L5 887 aa16.15■□□□□ 0.18
USB1-207ENST00000563149 CWC22Q9HCG8 908 aaKnown RBP16.15■□□□□ 0.18
USB1-207ENST00000563149 IBTKQ9P2D0 1353 aaPredicted RBP16.14■□□□□ 0.17
USB1-207ENST00000563149 HTATSF1O43719 755 aaKnown RBP16.13■□□□□ 0.17
USB1-207ENST00000563149 REC8O95072 547 aa16.13■□□□□ 0.17
USB1-207ENST00000563149 C16orf71Q8IYS4 520 aaPredicted RBP16.13■□□□□ 0.17
USB1-207ENST00000563149 FMN2Q9NZ56 1722 aa16.13■□□□□ 0.17
USB1-207ENST00000563149 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
USB1-207ENST00000563149 SDSP20132 328 aa16.13■□□□□ 0.17
USB1-207ENST00000563149 CLCN1P35523 988 aa16.13■□□□□ 0.17
USB1-207ENST00000563149 KRT24Q2M2I5 525 aa16.13■□□□□ 0.17
USB1-207ENST00000563149 HSP90AB2PQ58FF8 381 aa16.13■□□□□ 0.17
USB1-207ENST00000563149 RTF1Q92541 710 aaKnown RBP16.13■□□□□ 0.17
USB1-207ENST00000563149 PANK2Q9BZ23 570 aa16.13■□□□□ 0.17
USB1-207ENST00000563149 SBNO1A3KN83 1393 aa16.13■□□□□ 0.17
USB1-207ENST00000563149 KDRP35968 1356 aa16.13■□□□□ 0.17
USB1-207ENST00000563149 FLT4P35916 1363 aa16.12■□□□□ 0.17
USB1-207ENST00000563149 SOS1Q07889 1333 aaPredicted RBP16.12■□□□□ 0.17
USB1-207ENST00000563149 MEIS3Q99687 375 aa16.12■□□□□ 0.17
USB1-207ENST00000563149 ST18O60284 1047 aa16.11■□□□□ 0.17
USB1-207ENST00000563149 SSFA2P28290 1259 aa16.11■□□□□ 0.17
USB1-207ENST00000563149 KLHL40Q2TBA0 621 aa16.11■□□□□ 0.17
USB1-207ENST00000563149 BAG4O95429 457 aaKnown RBP16.1■□□□□ 0.17
USB1-207ENST00000563149 PTPRUQ92729 1446 aa16.1■□□□□ 0.17
USB1-207ENST00000563149 ARXQ96QS3 562 aa16.1■□□□□ 0.17
USB1-207ENST00000563149 FOXD4L1Q9NU39 408 aa16.1■□□□□ 0.17
USB1-207ENST00000563149 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.1■□□□□ 0.17
USB1-207ENST00000563149 TSPYL4Q9UJ04 414 aa16.1■□□□□ 0.17
USB1-207ENST00000563149 MAP3K19Q56UN5 1328 aa16.09■□□□□ 0.17
USB1-207ENST00000563149 ERC2O15083 957 aa16.09■□□□□ 0.17
USB1-207ENST00000563149 CYP2E1P05181 493 aaPredicted RBP16.09■□□□□ 0.17
USB1-207ENST00000563149 MTHFSDQ2M296 383 aaKnown RBP16.09■□□□□ 0.17
USB1-207ENST00000563149 IGSF1Q8N6C5 1336 aa16.08■□□□□ 0.17
USB1-207ENST00000563149 GNAI2P04899 355 aa16.08■□□□□ 0.17
USB1-207ENST00000563149 BABAM1Q9NWV8 329 aa16.08■□□□□ 0.17
USB1-207ENST00000563149 OTUD7AQ8TE49 926 aaPredicted RBP16.08■□□□□ 0.16
USB1-207ENST00000563149 STK31Q9BXU1 1019 aa16.08■□□□□ 0.16
USB1-207ENST00000563149 LRRC37A3O60309 1634 aa16.07■□□□□ 0.16
USB1-207ENST00000563149 RIMS1Q86UR5 1692 aaKnown RBP16.07■□□□□ 0.16
USB1-207ENST00000563149 SMARCA5O60264 1052 aaPredicted RBP16.07■□□□□ 0.16
USB1-207ENST00000563149 GNAI3P08754 354 aa16.07■□□□□ 0.16
USB1-207ENST00000563149 PDE1AP54750 535 aa16.07■□□□□ 0.16
USB1-207ENST00000563149 GAS2L3Q86XJ1 694 aa16.07■□□□□ 0.16
USB1-207ENST00000563149 EID1Q9Y6B2 187 aa16.06■□□□□ 0.16
USB1-207ENST00000563149 DDX49Q9Y6V7 483 aaKnown RBP16.06■□□□□ 0.16
USB1-207ENST00000563149 LTKP29376 864 aa16.05■□□□□ 0.16
USB1-207ENST00000563149 MCM2P49736 904 aa16.05■□□□□ 0.16
USB1-207ENST00000563149 CCDC30Q5VVM6 783 aa16.05■□□□□ 0.16
USB1-207ENST00000563149 TBX22Q9Y458 520 aa16.05■□□□□ 0.16
USB1-207ENST00000563149 KIF13AQ9H1H9 1805 aa16.05■□□□□ 0.16
USB1-207ENST00000563149 CACNA1FO60840 1977 aa16.05■□□□□ 0.16
USB1-207ENST00000563149 G2E3Q7L622 706 aa16.05■□□□□ 0.16
USB1-207ENST00000563149 TRIM44Q96DX7 344 aaPredicted RBP16.05■□□□□ 0.16
USB1-207ENST00000563149 SLIT1O75093 1534 aa16.05■□□□□ 0.16
USB1-207ENST00000563149 SALL3Q9BXA9 1300 aa16.04■□□□□ 0.16
USB1-207ENST00000563149 EPB41L2O43491 1005 aaKnown RBP16.04■□□□□ 0.16
USB1-207ENST00000563149 AMPHP49418 695 aa16.04■□□□□ 0.16
USB1-207ENST00000563149 ZNF445P59923 1031 aa16.04■□□□□ 0.16
USB1-207ENST00000563149 CCDC173Q0VFZ6 552 aa16.04■□□□□ 0.16
USB1-207ENST00000563149 EYA1Q99502 592 aa16.04■□□□□ 0.16
USB1-207ENST00000563149 PXDNLA1KZ92 1463 aa16.04■□□□□ 0.16
USB1-207ENST00000563149 ARHGAP23Q9P227 1491 aa16.04■□□□□ 0.16
USB1-207ENST00000563149 DIP2AQ14689 1571 aa16.04■□□□□ 0.16
USB1-207ENST00000563149 N4BP2Q86UW6 1770 aaPredicted RBP16.04■□□□□ 0.16
USB1-207ENST00000563149 ESPNB1AK53 854 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms