RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, human

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF9-208	ENST00000560311	NUTM2A	Q8IVF1	878 aa	Predicted RBP	9.39	□□□□□ -0.91
IRF9-208	ENST00000560311	SIN3A	Q96ST3	1273 aa		9.39	□□□□□ -0.91
IRF9-208	ENST00000560311	HIRIP3	Q9BW71	556 aa	Predicted RBP	9.39	□□□□□ -0.91
IRF9-208	ENST00000560311	WBP1L	Q9NX94	342 aa		9.39	□□□□□ -0.91
IRF9-208	ENST00000560311	TNS3	Q68CZ2	1445 aa		9.39	□□□□□ -0.91
IRF9-208	ENST00000560311	XPC	Q01831	940 aa	Predicted RBP	9.38	□□□□□ -0.91
IRF9-208	ENST00000560311	L3MBTL2	Q969R5	705 aa		9.38	□□□□□ -0.91
IRF9-208	ENST00000560311	ITSN1	Q15811	1721 aa		9.38	□□□□□ -0.91
IRF9-208	ENST00000560311	QRICH2	Q9H0J4	1663 aa		9.38	□□□□□ -0.91
IRF9-208	ENST00000560311	ABCA3	Q99758	1704 aa		9.37	□□□□□ -0.91
IRF9-208	ENST00000560311	POTEA	Q6S8J7	498 aa		9.37	□□□□□ -0.91
IRF9-208	ENST00000560311	TRPM3	Q9HCF6	1732 aa	Predicted RBP	9.36	□□□□□ -0.91
IRF9-208	ENST00000560311	PRR36	Q9H6K5	1346 aa		9.36	□□□□□ -0.91
IRF9-208	ENST00000560311	FOXO3	O43524	673 aa		9.36	□□□□□ -0.91
IRF9-208	ENST00000560311	NEUROD1	Q13562	356 aa		9.36	□□□□□ -0.91
IRF9-208	ENST00000560311	NKX1-1	Q15270	411 aa	Predicted RBP	9.36	□□□□□ -0.91
IRF9-208	ENST00000560311	NBPF1	Q3BBV0	1214 aa		9.36	□□□□□ -0.91
IRF9-208	ENST00000560311	ZFR	Q96KR1	1074 aa	Known RBP	9.36	□□□□□ -0.91
IRF9-208	ENST00000560311	PCDHGA10	Q9Y5H3	936 aa		9.36	□□□□□ -0.91
IRF9-208	ENST00000560311	ROCK2	O75116	1388 aa	Known RBP	9.36	□□□□□ -0.91
IRF9-208	ENST00000560311	AFF2	P51816	1311 aa		9.35	□□□□□ -0.91
IRF9-208	ENST00000560311	RALGAPB	Q86X10	1494 aa		9.35	□□□□□ -0.91
IRF9-208	ENST00000560311	RGPD8	O14715	1765 aa	Predicted RBP	9.35	□□□□□ -0.91
IRF9-208	ENST00000560311	WASL	O00401	505 aa	Predicted RBP	9.35	□□□□□ -0.91
IRF9-208	ENST00000560311	GFRA3	O60609	400 aa		9.35	□□□□□ -0.91
IRF9-208	ENST00000560311	TRAF7	Q6Q0C0	670 aa		9.35	□□□□□ -0.91
IRF9-208	ENST00000560311	C8orf37	Q96NL8	207 aa		9.35	□□□□□ -0.91
IRF9-208	ENST00000560311	KIAA1468	Q9P260	1216 aa		9.35	□□□□□ -0.91
IRF9-208	ENST00000560311	SBNO1	A3KN83	1393 aa		9.35	□□□□□ -0.91
IRF9-208	ENST00000560311	TONSL	Q96HA7	1378 aa		9.35	□□□□□ -0.91
IRF9-208	ENST00000560311	SPATA31A3	Q5VYP0	1347 aa		9.34	□□□□□ -0.91
IRF9-208	ENST00000560311	ADAMTS2	O95450	1211 aa		9.34	□□□□□ -0.91
IRF9-208	ENST00000560311	MAP3K9	P80192	1104 aa		9.34	□□□□□ -0.91
IRF9-208	ENST00000560311	LAPTM4A	Q15012	233 aa		9.34	□□□□□ -0.91
IRF9-208	ENST00000560311	ZNF772	Q68DY9	489 aa	Predicted RBP	9.34	□□□□□ -0.91
IRF9-208	ENST00000560311	NYAP1	Q6ZVC0	841 aa		9.34	□□□□□ -0.91
IRF9-208	ENST00000560311	LAPTM4B	Q86VI4	370 aa		9.34	□□□□□ -0.91
IRF9-208	ENST00000560311	ALS2	Q96Q42	1657 aa		9.34	□□□□□ -0.91
IRF9-208	ENST00000560311	ARHGEF10	O15013	1369 aa		9.34	□□□□□ -0.91
IRF9-208	ENST00000560311	GPRASP1	Q5JY77	1395 aa		9.34	□□□□□ -0.91
IRF9-208	ENST00000560311	CENPJ	Q9HC77	1338 aa	Predicted RBP	9.33	□□□□□ -0.92
IRF9-208	ENST00000560311	PDE4A	P27815	886 aa		9.33	□□□□□ -0.92
IRF9-208	ENST00000560311	PMFBP1	Q8TBY8	1022 aa		9.33	□□□□□ -0.92
IRF9-208	ENST00000560311	SEPT9	Q9UHD8	586 aa	Predicted RBP	9.33	□□□□□ -0.92
IRF9-208	ENST00000560311	MARF1	Q9Y4F3	1742 aa	Known RBP	9.33	□□□□□ -0.92
IRF9-208	ENST00000560311	CDK12	Q9NYV4	1490 aa	Predicted RBP	9.33	□□□□□ -0.92
IRF9-208	ENST00000560311	RGS12	O14924	1447 aa		9.32	□□□□□ -0.92
IRF9-208	ENST00000560311	KRT28	Q7Z3Y7	464 aa		9.32	□□□□□ -0.92
IRF9-208	ENST00000560311	CRYBG1	Q9Y4K1	1723 aa		9.31	□□□□□ -0.92
IRF9-208	ENST00000560311	PSME1	Q06323	249 aa		9.31	□□□□□ -0.92
IRF9-208	ENST00000560311	PLCH1	Q4KWH8	1693 aa		9.31	□□□□□ -0.92
IRF9-208	ENST00000560311	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	9.31	□□□□□ -0.92
IRF9-208	ENST00000560311	ATRN	O75882	1429 aa		9.31	□□□□□ -0.92
IRF9-208	ENST00000560311	PPIP5K1	Q6PFW1	1433 aa		9.31	□□□□□ -0.92
IRF9-208	ENST00000560311	POLR3A	O14802	1390 aa	Predicted RBP	9.3	□□□□□ -0.92
IRF9-208	ENST00000560311	NBPF8	Q3BBV2	869 aa		9.3	□□□□□ -0.92
IRF9-208	ENST00000560311	NUDT16	Q96DE0	195 aa	Known RBP	9.3	□□□□□ -0.92
IRF9-208	ENST00000560311	LARP6	Q9BRS8	491 aa	Known RBP	9.3	□□□□□ -0.92
IRF9-208	ENST00000560311	CDK19	Q9BWU1	502 aa		9.3	□□□□□ -0.92
IRF9-208	ENST00000560311	PHRF1	Q9P1Y6	1649 aa	Known RBP	9.3	□□□□□ -0.92
IRF9-208	ENST00000560311	SLIT2	O94813	1529 aa		9.3	□□□□□ -0.92
IRF9-208	ENST00000560311	NRK	Q7Z2Y5	1582 aa		9.29	□□□□□ -0.92
IRF9-208	ENST00000560311	BCL9L	Q86UU0	1499 aa		9.29	□□□□□ -0.92
IRF9-208	ENST00000560311	NGDN	Q8NEJ9	315 aa	Known RBP	9.29	□□□□□ -0.92
IRF9-208	ENST00000560311	NGLY1	Q96IV0	654 aa		9.29	□□□□□ -0.92
IRF9-208	ENST00000560311	EMILIN3	Q9NT22	766 aa		9.29	□□□□□ -0.92
IRF9-208	ENST00000560311	SRPK2	P78362	688 aa	Known RBP	9.28	□□□□□ -0.92
IRF9-208	ENST00000560311	TYW1B	Q6NUM6	668 aa		9.28	□□□□□ -0.92
IRF9-208	ENST00000560311	LMOD2	Q6P5Q4	547 aa		9.28	□□□□□ -0.92
IRF9-208	ENST00000560311	USP21	Q9UK80	565 aa		9.28	□□□□□ -0.92
IRF9-208	ENST00000560311	HPS5	Q9UPZ3	1129 aa		9.28	□□□□□ -0.92
IRF9-208	ENST00000560311	NRAP	Q86VF7	1730 aa		9.28	□□□□□ -0.92
IRF9-208	ENST00000560311	SBNO2	Q9Y2G9	1366 aa		9.27	□□□□□ -0.93
IRF9-208	ENST00000560311	RXRB	P28702	533 aa		9.27	□□□□□ -0.93
IRF9-208	ENST00000560311	HAP1	P54257	671 aa	Predicted RBP	9.27	□□□□□ -0.93
IRF9-208	ENST00000560311	FNBP4	Q8N3X1	1017 aa	Predicted RBP	9.27	□□□□□ -0.93
IRF9-208	ENST00000560311	CABLES1	Q8TDN4	633 aa		9.27	□□□□□ -0.93
IRF9-208	ENST00000560311	DDX27	Q96GQ7	796 aa	Known RBP	9.27	□□□□□ -0.93
IRF9-208	ENST00000560311	NWD2	Q9ULI1	1742 aa		9.27	□□□□□ -0.93
IRF9-208	ENST00000560311	GLI3	P10071	1580 aa		9.26	□□□□□ -0.93
IRF9-208	ENST00000560311	FBXW7	Q969H0	707 aa		9.26	□□□□□ -0.93
IRF9-208	ENST00000560311	CARD11	Q9BXL7	1154 aa		9.26	□□□□□ -0.93
IRF9-208	ENST00000560311	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	9.26	□□□□□ -0.93
IRF9-208	ENST00000560311	TSR3	Q9UJK0	312 aa	Known RBP	9.26	□□□□□ -0.93
IRF9-208	ENST00000560311	TRPC5	Q9UL62	973 aa	Predicted RBP	9.26	□□□□□ -0.93
IRF9-208	ENST00000560311	COL14A1	Q05707	1796 aa	Known RBP	9.26	□□□□□ -0.93
IRF9-208	ENST00000560311	ACE	P12821	1306 aa		9.26	□□□□□ -0.93
IRF9-208	ENST00000560311	EVC2	Q86UK5	1308 aa		9.26	□□□□□ -0.93
IRF9-208	ENST00000560311	USP6	P35125	1406 aa		9.25	□□□□□ -0.93
IRF9-208	ENST00000560311	RBM6	P78332	1123 aa	Known RBP	9.25	□□□□□ -0.93
IRF9-208	ENST00000560311	PRKD2	Q9BZL6	878 aa		9.25	□□□□□ -0.93
IRF9-208	ENST00000560311	QTRT2	Q9H974	415 aa	Known RBP	9.25	□□□□□ -0.93
IRF9-208	ENST00000560311	ATAD2	Q6PL18	1390 aa		9.24	□□□□□ -0.93
IRF9-208	ENST00000560311	PIK3C2A	O00443	1686 aa		9.24	□□□□□ -0.93
IRF9-208	ENST00000560311	PLEKHG3	A1L390	1219 aa		9.24	□□□□□ -0.93
IRF9-208	ENST00000560311	PHF14	O94880	888 aa		9.24	□□□□□ -0.93
IRF9-208	ENST00000560311	LRCH3	Q96II8	777 aa		9.24	□□□□□ -0.93
IRF9-208	ENST00000560311	RYDEN	Q9NUL5	291 aa	Known RBP	9.24	□□□□□ -0.93
IRF9-208	ENST00000560311	SLIT3	O75094	1523 aa		9.23	□□□□□ -0.93
IRF9-208	ENST00000560311	NRG2	O14511	850 aa	Predicted RBP	9.23	□□□□□ -0.93

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