RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 USP17L17D6RBQ6 530 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L19D6RCP7 530 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L20D6RJB6 530 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 KIF20AO95235 890 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 PTPREP23469 700 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 DMTNQ08495 405 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L24Q0WX57 530 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 RALBP1Q15311 655 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 SWI5Q1ZZU3 235 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 DESI1Q6ICB0 168 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 LARP1Q6PKG0 1096 aaKnown RBP6.75□□□□□ -1.33
PCNX1-214ENST00000556849 C1orf216Q8TAB5 229 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 FAM200AQ8TCP9 573 aa6.75□□□□□ -1.33
PCNX1-214ENST00000556849 IPO4Q8TEX9 1081 aaKnown RBP6.75□□□□□ -1.33
PCNX1-214ENST00000556849 GTPBP4Q9BZE4 634 aaKnown RBP6.75□□□□□ -1.33
PCNX1-214ENST00000556849 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.75□□□□□ -1.33
PCNX1-214ENST00000556849 FYCO1Q9BQS8 1478 aa6.74□□□□□ -1.33
PCNX1-214ENST00000556849 ZBBXA8MT70 800 aa6.74□□□□□ -1.33
PCNX1-214ENST00000556849 USP17L5A8MUK1 530 aa6.74□□□□□ -1.33
PCNX1-214ENST00000556849 ATP5J2-PTCD1G3V325 749 aa6.74□□□□□ -1.33
PCNX1-214ENST00000556849 MCM4P33991 863 aa6.74□□□□□ -1.33
PCNX1-214ENST00000556849 SLC4A3P48751 1232 aa6.74□□□□□ -1.33
PCNX1-214ENST00000556849 RGS3P49796 1198 aa6.74□□□□□ -1.33
PCNX1-214ENST00000556849 GUCA2AQ02747 115 aa6.74□□□□□ -1.33
PCNX1-214ENST00000556849 FAM50AQ14320 339 aaKnown RBP6.74□□□□□ -1.33
PCNX1-214ENST00000556849 PPP1R9BQ96SB3 815 aa6.74□□□□□ -1.33
PCNX1-214ENST00000556849 ZSWIM6Q9HCJ5 1215 aa6.74□□□□□ -1.33
PCNX1-214ENST00000556849 EIF3AQ14152 1382 aaKnown RBP6.73□□□□□ -1.33
PCNX1-214ENST00000556849 KIF15Q9NS87 1388 aa6.73□□□□□ -1.33
PCNX1-214ENST00000556849 CUX1P39880 1505 aa6.73□□□□□ -1.33
PCNX1-214ENST00000556849 C3orf80F5H4A9 247 aa6.73□□□□□ -1.33
PCNX1-214ENST00000556849 DYNC1I1O14576 645 aa6.73□□□□□ -1.33
PCNX1-214ENST00000556849 SKIP12755 728 aa6.73□□□□□ -1.33
PCNX1-214ENST00000556849 ATP2B4P23634 1241 aa6.73□□□□□ -1.33
PCNX1-214ENST00000556849 RIPK4P57078 832 aa6.73□□□□□ -1.33
PCNX1-214ENST00000556849 MCCD1P59942 119 aaPredicted RBP6.73□□□□□ -1.33
PCNX1-214ENST00000556849 ZC3H6P61129 1189 aaKnown RBP6.73□□□□□ -1.33
PCNX1-214ENST00000556849 PTK7Q13308 1070 aa6.73□□□□□ -1.33
PCNX1-214ENST00000556849 KIAA1211Q6ZU35 1233 aa6.73□□□□□ -1.33
PCNX1-214ENST00000556849 NPAS4Q8IUM7 802 aa6.73□□□□□ -1.33
PCNX1-214ENST00000556849 TRIM44Q96DX7 344 aaPredicted RBP6.73□□□□□ -1.33
PCNX1-214ENST00000556849 GRPEL1Q9HAV7 217 aa6.73□□□□□ -1.33
PCNX1-214ENST00000556849 EGFL7Q9UHF1 273 aa6.73□□□□□ -1.33
PCNX1-214ENST00000556849 USP19O94966 1318 aa6.73□□□□□ -1.33
PCNX1-214ENST00000556849 MYBBP1AQ9BQG0 1328 aaKnown RBP6.73□□□□□ -1.33
PCNX1-214ENST00000556849 ZC3H4Q9UPT8 1303 aaKnown RBP6.73□□□□□ -1.33
PCNX1-214ENST00000556849 ANKRD33BA6NCL7 494 aa6.72□□□□□ -1.33
PCNX1-214ENST00000556849 RIMBP2O15034 1052 aa6.72□□□□□ -1.33
PCNX1-214ENST00000556849 NUDT7P0C024 238 aa6.72□□□□□ -1.33
PCNX1-214ENST00000556849 TNNT2P45379 298 aaPredicted RBP6.72□□□□□ -1.33
PCNX1-214ENST00000556849 FAM69CQ0P6D2 419 aa6.72□□□□□ -1.33
PCNX1-214ENST00000556849 CCDC173Q0VFZ6 552 aa6.72□□□□□ -1.33
PCNX1-214ENST00000556849 SKOR2Q2VWA4 1001 aaPredicted RBP6.72□□□□□ -1.33
PCNX1-214ENST00000556849 NOM1Q5C9Z4 860 aaKnown RBP6.72□□□□□ -1.33
PCNX1-214ENST00000556849 ZSCAN30Q86W11 494 aa6.72□□□□□ -1.33
PCNX1-214ENST00000556849 RNF135Q8IUD6 432 aa6.72□□□□□ -1.33
PCNX1-214ENST00000556849 TMC1Q8TDI8 760 aa6.72□□□□□ -1.33
PCNX1-214ENST00000556849 BIN2Q9UBW5 565 aaPredicted RBP6.72□□□□□ -1.33
PCNX1-214ENST00000556849 MKRN1Q9UHC7 482 aaKnown RBP6.72□□□□□ -1.33
PCNX1-214ENST00000556849 CASKIN1Q8WXD9 1431 aa6.72□□□□□ -1.33
PCNX1-214ENST00000556849 RPRD2Q5VT52 1461 aaKnown RBP6.72□□□□□ -1.33
PCNX1-214ENST00000556849 PIK3CDO00329 1044 aa6.71□□□□□ -1.34
PCNX1-214ENST00000556849 ZNF500O60304 480 aaPredicted RBP6.71□□□□□ -1.34
PCNX1-214ENST00000556849 LETM1O95202 739 aaPredicted RBP6.71□□□□□ -1.34
PCNX1-214ENST00000556849 SLC10A3P09131 477 aa6.71□□□□□ -1.34
PCNX1-214ENST00000556849 FBXO45P0C2W1 286 aa6.71□□□□□ -1.34
PCNX1-214ENST00000556849 RASA1P20936 1047 aa6.71□□□□□ -1.34
PCNX1-214ENST00000556849 GTF2E1P29083 439 aaPredicted RBP6.71□□□□□ -1.34
PCNX1-214ENST00000556849 MCM5P33992 734 aa6.71□□□□□ -1.34
PCNX1-214ENST00000556849 CNGB1Q14028 1251 aaPredicted RBP6.71□□□□□ -1.34
PCNX1-214ENST00000556849 COL19A1Q14993 1142 aa6.71□□□□□ -1.34
PCNX1-214ENST00000556849 SF3A1Q15459 793 aaKnown RBP6.71□□□□□ -1.34
PCNX1-214ENST00000556849 DOK7Q18PE1 504 aa6.71□□□□□ -1.34
PCNX1-214ENST00000556849 CRTC2Q53ET0 693 aaPredicted RBP6.71□□□□□ -1.34
PCNX1-214ENST00000556849 HLA-CQ95604 372 aa6.71□□□□□ -1.34
PCNX1-214ENST00000556849 STAC3Q96MF2 364 aa6.71□□□□□ -1.34
PCNX1-214ENST00000556849 CHMP5Q9NZZ3 219 aa6.71□□□□□ -1.34
PCNX1-214ENST00000556849 DENND4BO75064 1496 aaPredicted RBP6.71□□□□□ -1.34
PCNX1-214ENST00000556849 TEX14Q8IWB6 1497 aa6.71□□□□□ -1.34
PCNX1-214ENST00000556849 ERBB4Q15303 1308 aa6.71□□□□□ -1.34
PCNX1-214ENST00000556849 MAPK8IP3Q9UPT6 1336 aa6.71□□□□□ -1.34
PCNX1-214ENST00000556849 VIRMAQ69YN4 1812 aaKnown RBP6.71□□□□□ -1.34
PCNX1-214ENST00000556849 EFCAB5A4FU69 1503 aa6.71□□□□□ -1.34
PCNX1-214ENST00000556849 IBTKQ9P2D0 1353 aaPredicted RBP6.7□□□□□ -1.34
PCNX1-214ENST00000556849 ATP6V1AP38606 617 aa6.7□□□□□ -1.34
PCNX1-214ENST00000556849 SERPINB4P48594 390 aa6.7□□□□□ -1.34
PCNX1-214ENST00000556849 HDGFP51858 240 aaKnown RBP6.7□□□□□ -1.34
PCNX1-214ENST00000556849 RETREG3Q86VR2 466 aa6.7□□□□□ -1.34
PCNX1-214ENST00000556849 ANKMY2Q8IV38 441 aa6.7□□□□□ -1.34
PCNX1-214ENST00000556849 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.7□□□□□ -1.34
PCNX1-214ENST00000556849 UBXN4Q92575 508 aa6.7□□□□□ -1.34
PCNX1-214ENST00000556849 CRBNQ96SW2 442 aa6.7□□□□□ -1.34
PCNX1-214ENST00000556849 NAP1L2Q9ULW6 460 aaPredicted RBP6.7□□□□□ -1.34
PCNX1-214ENST00000556849 TCOF1Q13428 1488 aaKnown RBP6.7□□□□□ -1.34
PCNX1-214ENST00000556849 GCC2Q8IWJ2 1684 aa6.7□□□□□ -1.34
PCNX1-214ENST00000556849 BLMP54132 1417 aaPredicted RBP6.69□□□□□ -1.34
PCNX1-214ENST00000556849 PTPRKQ15262 1439 aa6.69□□□□□ -1.34
PCNX1-214ENST00000556849 NLRP1Q9C000 1473 aa6.69□□□□□ -1.34
PCNX1-214ENST00000556849 L3MBTL2Q969R5 705 aa6.69□□□□□ -1.34
PCNX1-214ENST00000556849 CCDC94Q9BW85 323 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms