RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 TBX22Q9Y458 520 aa10.03□□□□□ -0.8
LINC00641-201ENST00000555379 CFAP43Q8NDM7 1665 aa10.03□□□□□ -0.8
LINC00641-201ENST00000555379 NUTM2BA6NNL0 878 aaPredicted RBP10.02□□□□□ -0.8
LINC00641-201ENST00000555379 NUTM2EB1AL46 878 aaPredicted RBP10.02□□□□□ -0.8
LINC00641-201ENST00000555379 ELL2O00472 640 aaPredicted RBP10.02□□□□□ -0.8
LINC00641-201ENST00000555379 NUTM2AQ8IVF1 878 aaPredicted RBP10.02□□□□□ -0.8
LINC00641-201ENST00000555379 DNAJC5BQ9UF47 199 aa10.02□□□□□ -0.8
LINC00641-201ENST00000555379 NOL7Q9UMY1 257 aaKnown RBP10.02□□□□□ -0.8
LINC00641-201ENST00000555379 NUP153P49790 1475 aaKnown RBP10.02□□□□□ -0.8
LINC00641-201ENST00000555379 TAF7Q15545 349 aaPredicted RBP10.02□□□□□ -0.81
LINC00641-201ENST00000555379 KRT28Q7Z3Y7 464 aa10.02□□□□□ -0.81
LINC00641-201ENST00000555379 ZSCAN31Q96LW9 406 aaPredicted RBP10.02□□□□□ -0.81
LINC00641-201ENST00000555379 PTPRCP08575 1304 aa10.02□□□□□ -0.81
LINC00641-201ENST00000555379 SPTY2D1Q68D10 685 aaPredicted RBP10.02□□□□□ -0.81
LINC00641-201ENST00000555379 ZNF526Q8TF50 670 aaPredicted RBP10.02□□□□□ -0.81
LINC00641-201ENST00000555379 DACH1Q9UI36 760 aa10.02□□□□□ -0.81
LINC00641-201ENST00000555379 MAPKBP1O60336 1514 aa10.02□□□□□ -0.81
LINC00641-201ENST00000555379 CDR1P51861 262 aa10.02□□□□□ -0.81
LINC00641-201ENST00000555379 RABEP1Q15276 862 aa10.02□□□□□ -0.81
LINC00641-201ENST00000555379 CAVIN4Q5BKX8 364 aa10.02□□□□□ -0.81
LINC00641-201ENST00000555379 MYO6Q9UM54 1294 aa10.02□□□□□ -0.81
LINC00641-201ENST00000555379 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
LINC00641-201ENST00000555379 CHMP5Q9NZZ3 219 aa10.01□□□□□ -0.81
LINC00641-201ENST00000555379 SURF6O75683 361 aaKnown RBP10.01□□□□□ -0.81
LINC00641-201ENST00000555379 PPP1R42Q7Z4L9 355 aa10.01□□□□□ -0.81
LINC00641-201ENST00000555379 COG6Q9Y2V7 657 aa10.01□□□□□ -0.81
LINC00641-201ENST00000555379 CCP110O43303 1012 aa10.01□□□□□ -0.81
LINC00641-201ENST00000555379 DESP17661 470 aa10.01□□□□□ -0.81
LINC00641-201ENST00000555379 CDC5LQ99459 802 aaKnown RBP10.01□□□□□ -0.81
LINC00641-201ENST00000555379 C19orf44Q9H6X5 657 aa10.01□□□□□ -0.81
LINC00641-201ENST00000555379 LRRCC1Q9C099 1032 aa10.01□□□□□ -0.81
LINC00641-201ENST00000555379 LUC7LQ9NQ29 371 aaKnown RBP10.01□□□□□ -0.81
LINC00641-201ENST00000555379 NOS1P29475 1434 aa10.01□□□□□ -0.81
LINC00641-201ENST00000555379 NBPF8Q3BBV2 869 aa10□□□□□ -0.81
LINC00641-201ENST00000555379 SOGA3Q5TF21 947 aa10□□□□□ -0.81
LINC00641-201ENST00000555379 NBPF14Q5TI25 921 aa10□□□□□ -0.81
LINC00641-201ENST00000555379 KLHL34Q8N239 644 aa10□□□□□ -0.81
LINC00641-201ENST00000555379 AIMP1Q12904 312 aaKnown RBP10□□□□□ -0.81
LINC00641-201ENST00000555379 TNIP1Q15025 636 aa10□□□□□ -0.81
LINC00641-201ENST00000555379 LRRC59Q96AG4 307 aaKnown RBP10□□□□□ -0.81
LINC00641-201ENST00000555379 SIRT1Q96EB6 747 aa10□□□□□ -0.81
LINC00641-201ENST00000555379 DNAJC2Q99543 621 aaKnown RBP10□□□□□ -0.81
LINC00641-201ENST00000555379 RBM10P98175 930 aaKnown RBP10□□□□□ -0.81
LINC00641-201ENST00000555379 IDI1Q13907 227 aa10□□□□□ -0.81
LINC00641-201ENST00000555379 BABAM1Q9NWV8 329 aa10□□□□□ -0.81
LINC00641-201ENST00000555379 SSR1P43307 286 aaKnown RBP10□□□□□ -0.81
LINC00641-201ENST00000555379 OLFM4Q6UX06 510 aa10□□□□□ -0.81
LINC00641-201ENST00000555379 PAXIP1Q6ZW49 1069 aaPredicted RBP10□□□□□ -0.81
LINC00641-201ENST00000555379 ZGPATQ8N5A5 531 aaKnown RBP10□□□□□ -0.81
LINC00641-201ENST00000555379 ARHGEF10O15013 1369 aa9.99□□□□□ -0.81
LINC00641-201ENST00000555379 MBD3O95983 291 aa9.99□□□□□ -0.81
LINC00641-201ENST00000555379 SYCP2Q9BX26 1530 aa9.99□□□□□ -0.81
LINC00641-201ENST00000555379 TTF1Q15361 905 aaPredicted RBP9.99□□□□□ -0.81
LINC00641-201ENST00000555379 IKQ13123 557 aaPredicted RBP9.99□□□□□ -0.81
LINC00641-201ENST00000555379 DDX54Q8TDD1 881 aaKnown RBP9.99□□□□□ -0.81
LINC00641-201ENST00000555379 CDK5RAP3Q96JB5 506 aa9.99□□□□□ -0.81
LINC00641-201ENST00000555379 DBF4Q9UBU7 674 aaPredicted RBP9.99□□□□□ -0.81
LINC00641-201ENST00000555379 PIP4K2BP78356 416 aa9.99□□□□□ -0.81
LINC00641-201ENST00000555379 GSTO1P78417 241 aa9.99□□□□□ -0.81
LINC00641-201ENST00000555379 MCTP1Q6DN14 999 aa9.99□□□□□ -0.81
LINC00641-201ENST00000555379 CRBNQ96SW2 442 aa9.99□□□□□ -0.81
LINC00641-201ENST00000555379 SLC12A5Q9H2X9 1139 aa9.99□□□□□ -0.81
LINC00641-201ENST00000555379 RNF41Q9H4P4 317 aaPredicted RBP9.99□□□□□ -0.81
LINC00641-201ENST00000555379 PHAXQ9H814 394 aaKnown RBP9.99□□□□□ -0.81
LINC00641-201ENST00000555379 ZFYVE16Q7Z3T8 1539 aa9.99□□□□□ -0.81
LINC00641-201ENST00000555379 CCDC196A0A1B0GTZ2 297 aa9.98□□□□□ -0.81
LINC00641-201ENST00000555379 ST5P78524 1137 aa9.98□□□□□ -0.81
LINC00641-201ENST00000555379 PIK3C2GO75747 1445 aa9.98□□□□□ -0.81
LINC00641-201ENST00000555379 SLC5A1P13866 664 aa9.98□□□□□ -0.81
LINC00641-201ENST00000555379 CCDC173Q0VFZ6 552 aa9.98□□□□□ -0.81
LINC00641-201ENST00000555379 NYXQ9GZU5 481 aa9.98□□□□□ -0.81
LINC00641-201ENST00000555379 STIM1Q13586 685 aa9.98□□□□□ -0.81
LINC00641-201ENST00000555379 ADGRL2O95490 1459 aa9.98□□□□□ -0.81
LINC00641-201ENST00000555379 USP8P40818 1118 aa9.98□□□□□ -0.81
LINC00641-201ENST00000555379 CNKSR2Q8WXI2 1034 aa9.98□□□□□ -0.81
LINC00641-201ENST00000555379 AK7Q96M32 723 aa9.98□□□□□ -0.81
LINC00641-201ENST00000555379 DEF6Q9H4E7 631 aa9.97□□□□□ -0.81
LINC00641-201ENST00000555379 SLC4A2P04920 1241 aa9.97□□□□□ -0.81
LINC00641-201ENST00000555379 NUTM2GQ5VZR2 741 aa9.97□□□□□ -0.81
LINC00641-201ENST00000555379 CERS3Q8IU89 383 aa9.97□□□□□ -0.81
LINC00641-201ENST00000555379 RPGRQ92834 1020 aaKnown RBP9.97□□□□□ -0.81
LINC00641-201ENST00000555379 CEP131Q9UPN4 1083 aa9.97□□□□□ -0.81
LINC00641-201ENST00000555379 PLEKHH1Q9ULM0 1364 aa9.97□□□□□ -0.81
LINC00641-201ENST00000555379 KIF1BPQ96EK5 621 aa9.97□□□□□ -0.81
LINC00641-201ENST00000555379 PYM1Q9BRP8 204 aaKnown RBP9.97□□□□□ -0.81
LINC00641-201ENST00000555379 ATP7AQ04656 1500 aa9.97□□□□□ -0.81
LINC00641-201ENST00000555379 RAD21O60216 631 aa9.96□□□□□ -0.81
LINC00641-201ENST00000555379 SASS6Q6UVJ0 657 aa9.96□□□□□ -0.81
LINC00641-201ENST00000555379 BMP2KQ9NSY1 1161 aaPredicted RBP9.96□□□□□ -0.81
LINC00641-201ENST00000555379 ADAMTS8Q9UP79 889 aa9.96□□□□□ -0.81
LINC00641-201ENST00000555379 B4DLN1 442 aa9.96□□□□□ -0.81
LINC00641-201ENST00000555379 CLGNO14967 610 aa9.96□□□□□ -0.81
LINC00641-201ENST00000555379 MRPL12P52815 198 aaKnown RBP9.96□□□□□ -0.81
LINC00641-201ENST00000555379 PIK3R4Q99570 1358 aa9.96□□□□□ -0.81
LINC00641-201ENST00000555379 CEP170Q5SW79 1584 aa9.96□□□□□ -0.82
LINC00641-201ENST00000555379 EPS15P42566 896 aa9.96□□□□□ -0.82
LINC00641-201ENST00000555379 EXOSC9Q06265 439 aaKnown RBP9.96□□□□□ -0.82
LINC00641-201ENST00000555379 FILIP1LQ4L180 1135 aa9.96□□□□□ -0.82
LINC00641-201ENST00000555379 BICD2Q8TD16 824 aa9.96□□□□□ -0.82
LINC00641-201ENST00000555379 ACBD3Q9H3P7 528 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms