RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 TOMM22Q9NS69 142 aa14.98□□□□□ -0.01
ARHGEF40-206ENST00000555232 ABCC3O15438 1527 aa14.97□□□□□ -0.01
ARHGEF40-206ENST00000555232 FAM43AQ8N2R8 423 aa14.97□□□□□ -0.01
ARHGEF40-206ENST00000555232 MRPL50Q8N5N7 158 aaKnown RBP14.97□□□□□ -0.01
ARHGEF40-206ENST00000555232 KCNH5Q8NCM2 988 aa14.97□□□□□ -0.01
ARHGEF40-206ENST00000555232 UPF3BQ9BZI7 483 aaKnown RBP14.97□□□□□ -0.01
ARHGEF40-206ENST00000555232 GNAI3P08754 354 aa14.97□□□□□ -0.01
ARHGEF40-206ENST00000555232 NSD2O96028 1365 aa14.96□□□□□ -0.01
ARHGEF40-206ENST00000555232 NEK4P51957 841 aa14.96□□□□□ -0.01
ARHGEF40-206ENST00000555232 CHMP4CQ96CF2 233 aa14.96□□□□□ -0.01
ARHGEF40-206ENST00000555232 ABCC11Q96J66 1382 aa14.96□□□□□ -0.01
ARHGEF40-206ENST00000555232 CWF19L2Q2TBE0 894 aaKnown RBP14.96□□□□□ -0.02
ARHGEF40-206ENST00000555232 PPFIA3O75145 1194 aa14.95□□□□□ -0.02
ARHGEF40-206ENST00000555232 CCDC8Q9H0W5 538 aaPredicted RBP14.95□□□□□ -0.02
ARHGEF40-206ENST00000555232 C8orf34Q49A92 452 aa14.95□□□□□ -0.02
ARHGEF40-206ENST00000555232 HSP90B1P14625 803 aaKnown RBP14.95□□□□□ -0.02
ARHGEF40-206ENST00000555232 MYD88Q99836 296 aa14.95□□□□□ -0.02
ARHGEF40-206ENST00000555232 CDC45O75419 566 aa14.94□□□□□ -0.02
ARHGEF40-206ENST00000555232 GPTP24298 496 aa14.94□□□□□ -0.02
ARHGEF40-206ENST00000555232 CWC27Q6UX04 472 aaKnown RBP14.94□□□□□ -0.02
ARHGEF40-206ENST00000555232 E9PCH4 1651 aa14.94□□□□□ -0.02
ARHGEF40-206ENST00000555232 CLASRPQ8N2M8 674 aaKnown RBP14.94□□□□□ -0.02
ARHGEF40-206ENST00000555232 PA2G4Q9UQ80 394 aaKnown RBP14.94□□□□□ -0.02
ARHGEF40-206ENST00000555232 HECW2Q9P2P5 1572 aa14.94□□□□□ -0.02
ARHGEF40-206ENST00000555232 BICDL1Q6ZP65 573 aa14.94□□□□□ -0.02
ARHGEF40-206ENST00000555232 PLEKHF1Q96S99 279 aa14.94□□□□□ -0.02
ARHGEF40-206ENST00000555232 LRRCC1Q9C099 1032 aa14.94□□□□□ -0.02
ARHGEF40-206ENST00000555232 TULP1O00294 542 aaPredicted RBP14.93□□□□□ -0.02
ARHGEF40-206ENST00000555232 ALDH1L2Q3SY69 923 aa14.93□□□□□ -0.02
ARHGEF40-206ENST00000555232 MAP3K2Q9Y2U5 619 aa14.93□□□□□ -0.02
ARHGEF40-206ENST00000555232 CT47B1P0C2W7 299 aaPredicted RBP14.93□□□□□ -0.02
ARHGEF40-206ENST00000555232 GCC1Q96CN9 775 aa14.93□□□□□ -0.02
ARHGEF40-206ENST00000555232 TRIM44Q96DX7 344 aaPredicted RBP14.93□□□□□ -0.02
ARHGEF40-206ENST00000555232 GPATCH3Q96I76 525 aa14.93□□□□□ -0.02
ARHGEF40-206ENST00000555232 EFCAB6Q5THR3 1501 aa14.92□□□□□ -0.02
ARHGEF40-206ENST00000555232 ST18O60284 1047 aa14.92□□□□□ -0.02
ARHGEF40-206ENST00000555232 CCT4P50991 539 aaKnown RBP14.92□□□□□ -0.02
ARHGEF40-206ENST00000555232 CROCC2H7BZ55 1655 aa14.92□□□□□ -0.02
ARHGEF40-206ENST00000555232 IQGAP3Q86VI3 1631 aa14.92□□□□□ -0.02
ARHGEF40-206ENST00000555232 INTS3Q68E01 1043 aaKnown RBP14.92□□□□□ -0.02
ARHGEF40-206ENST00000555232 SPG7Q9UQ90 795 aa14.92□□□□□ -0.02
ARHGEF40-206ENST00000555232 ACSBG1Q96GR2 724 aa14.92□□□□□ -0.02
ARHGEF40-206ENST00000555232 C19orf44Q9H6X5 657 aa14.92□□□□□ -0.02
ARHGEF40-206ENST00000555232 RNF123Q5XPI4 1314 aa14.92□□□□□ -0.02
ARHGEF40-206ENST00000555232 CCDC27Q2M243 656 aa14.91□□□□□ -0.02
ARHGEF40-206ENST00000555232 AACSQ86V21 672 aa14.91□□□□□ -0.02
ARHGEF40-206ENST00000555232 ISY1Q9ULR0 285 aaKnown RBP14.91□□□□□ -0.02
ARHGEF40-206ENST00000555232 PRAMEF22A3QJZ6 481 aa14.91□□□□□ -0.02
ARHGEF40-206ENST00000555232 KLHDC4Q8TBB5 520 aa14.91□□□□□ -0.02
ARHGEF40-206ENST00000555232 ZBTB40Q9NUA8 1239 aa14.91□□□□□ -0.02
ARHGEF40-206ENST00000555232 ZNF521Q96K83 1311 aa14.91□□□□□ -0.02
ARHGEF40-206ENST00000555232 PPP1R42Q7Z4L9 355 aa14.91□□□□□ -0.02
ARHGEF40-206ENST00000555232 BOLA2Q9H3K6 86 aa14.91□□□□□ -0.02
ARHGEF40-206ENST00000555232 APPP05067 770 aa14.9□□□□□ -0.02
ARHGEF40-206ENST00000555232 FSD1Q9BTV5 496 aa14.9□□□□□ -0.02
ARHGEF40-206ENST00000555232 BLMP54132 1417 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF40-206ENST00000555232 CEP152O94986 1710 aa14.9□□□□□ -0.02
ARHGEF40-206ENST00000555232 IL17REQ8NFR9 667 aa14.9□□□□□ -0.02
ARHGEF40-206ENST00000555232 NINLQ9Y2I6 1382 aa14.9□□□□□ -0.02
ARHGEF40-206ENST00000555232 REC8O95072 547 aa14.9□□□□□ -0.02
ARHGEF40-206ENST00000555232 DNAAF4Q8WXU2 420 aa14.9□□□□□ -0.02
ARHGEF40-206ENST00000555232 DDX49Q9Y6V7 483 aaKnown RBP14.9□□□□□ -0.02
ARHGEF40-206ENST00000555232 FLT4P35916 1363 aa14.9□□□□□ -0.02
ARHGEF40-206ENST00000555232 PLXNC1O60486 1568 aa14.89□□□□□ -0.03
ARHGEF40-206ENST00000555232 UBE3BQ7Z3V4 1068 aa14.89□□□□□ -0.03
ARHGEF40-206ENST00000555232 TRPM1Q7Z4N2 1603 aa14.89□□□□□ -0.03
ARHGEF40-206ENST00000555232 PTMAP06454 111 aaKnown RBP14.89□□□□□ -0.03
ARHGEF40-206ENST00000555232 CADPS2Q86UW7 1296 aa14.89□□□□□ -0.03
ARHGEF40-206ENST00000555232 RRAGDQ9NQL2 400 aaPredicted RBP14.89□□□□□ -0.03
ARHGEF40-206ENST00000555232 COPS6Q7L5N1 327 aa14.89□□□□□ -0.03
ARHGEF40-206ENST00000555232 RNF17Q9BXT8 1623 aaKnown RBP14.89□□□□□ -0.03
ARHGEF40-206ENST00000555232 MEX3CQ5U5Q3 659 aaKnown RBP14.88□□□□□ -0.03
ARHGEF40-206ENST00000555232 TBC1D9Q6ZT07 1266 aa14.88□□□□□ -0.03
ARHGEF40-206ENST00000555232 TBC1D2Q9BYX2 928 aa14.88□□□□□ -0.03
ARHGEF40-206ENST00000555232 NPC1L1Q9UHC9 1359 aa14.88□□□□□ -0.03
ARHGEF40-206ENST00000555232 GOLGA6L4A6NEF3 574 aa14.88□□□□□ -0.03
ARHGEF40-206ENST00000555232 ZBTB7BO15156 539 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF40-206ENST00000555232 GBP4Q96PP9 640 aa14.88□□□□□ -0.03
ARHGEF40-206ENST00000555232 WASHC4Q2M389 1173 aa14.87□□□□□ -0.03
ARHGEF40-206ENST00000555232 MCTP1Q6DN14 999 aa14.87□□□□□ -0.03
ARHGEF40-206ENST00000555232 STK3Q13188 491 aa14.87□□□□□ -0.03
ARHGEF40-206ENST00000555232 PLEKHG3A1L390 1219 aa14.87□□□□□ -0.03
ARHGEF40-206ENST00000555232 XAGE3Q8WTP9 111 aa14.87□□□□□ -0.03
ARHGEF40-206ENST00000555232 PUS7Q96PZ0 661 aaKnown RBP14.87□□□□□ -0.03
ARHGEF40-206ENST00000555232 EDC4Q6P2E9 1401 aaKnown RBP14.87□□□□□ -0.03
ARHGEF40-206ENST00000555232 TTC21AQ8NDW8 1320 aa14.87□□□□□ -0.03
ARHGEF40-206ENST00000555232 VPS37CA5D8V6 355 aaPredicted RBP14.86□□□□□ -0.03
ARHGEF40-206ENST00000555232 RPAP2Q8IXW5 612 aaPredicted RBP14.86□□□□□ -0.03
ARHGEF40-206ENST00000555232 CHMP4AQ9BY43 222 aa14.86□□□□□ -0.03
ARHGEF40-206ENST00000555232 ZMYM4Q5VZL5 1548 aa14.86□□□□□ -0.03
ARHGEF40-206ENST00000555232 MPNDQ8N594 471 aa14.86□□□□□ -0.03
ARHGEF40-206ENST00000555232 A0A087WZG4 1122 aa14.86□□□□□ -0.03
ARHGEF40-206ENST00000555232 FKBP4Q02790 459 aaKnown RBP eCLIP14.86□□□□□ -0.03
ARHGEF40-206ENST00000555232 NDUFB9Q9Y6M9 179 aa14.86□□□□□ -0.03
ARHGEF40-206ENST00000555232 KIF1BO60333 1816 aa14.86□□□□□ -0.03
ARHGEF40-206ENST00000555232 UNC13BO14795 1591 aa14.86□□□□□ -0.03
ARHGEF40-206ENST00000555232 TCEANC2Q96MN5 208 aa14.86□□□□□ -0.03
ARHGEF40-206ENST00000555232 SNRKQ9NRH2 765 aa14.86□□□□□ -0.03
ARHGEF40-206ENST00000555232 TET3O43151 1660 aa14.85□□□□□ -0.03
ARHGEF40-206ENST00000555232 SBNO2Q9Y2G9 1366 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms