RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 ZCRB1Q8TBF4 217 aaKnown RBP22.85■■□□□ 1.25
ITGA5-213ENST00000553071 PNISRQ8TF01 805 aaKnown RBP22.85■■□□□ 1.25
ITGA5-213ENST00000553071 GLI3P10071 1580 aa22.84■■□□□ 1.25
ITGA5-213ENST00000553071 DISP2A7MBM2 1401 aa22.84■■□□□ 1.25
ITGA5-213ENST00000553071 AEBP1Q8IUX7 1158 aa22.84■■□□□ 1.25
ITGA5-213ENST00000553071 CCDC184Q52MB2 194 aa22.83■■□□□ 1.25
ITGA5-213ENST00000553071 RSPH6AQ9H0K4 717 aa22.83■■□□□ 1.25
ITGA5-213ENST00000553071 ADAMTS8Q9UP79 889 aa22.82■■□□□ 1.24
ITGA5-213ENST00000553071 OVOS2A0A0G2JMS6 1433 aa22.82■■□□□ 1.24
ITGA5-213ENST00000553071 PRKAR2BP31323 418 aa22.81■■□□□ 1.24
ITGA5-213ENST00000553071 RGPD1P0DJD0 1748 aa22.81■■□□□ 1.24
ITGA5-213ENST00000553071 GAS2L2Q8NHY3 880 aa22.8■■□□□ 1.24
ITGA5-213ENST00000553071 PCDH11XQ9BZA7 1347 aa22.8■■□□□ 1.24
ITGA5-213ENST00000553071 PCDH11YQ9BZA8 1340 aa22.8■■□□□ 1.24
ITGA5-213ENST00000553071 MAPK8IP3Q9UPT6 1336 aa22.8■■□□□ 1.24
ITGA5-213ENST00000553071 KRT27Q7Z3Y8 459 aa22.79■■□□□ 1.24
ITGA5-213ENST00000553071 MEGF6O75095 1541 aa22.78■■□□□ 1.24
ITGA5-213ENST00000553071 RGPD2P0DJD1 1756 aa22.78■■□□□ 1.24
ITGA5-213ENST00000553071 HSP90AB1P08238 724 aaKnown RBP22.77■■□□□ 1.24
ITGA5-213ENST00000553071 IFNL2Q8IZJ0 200 aa22.77■■□□□ 1.24
ITGA5-213ENST00000553071 RUNDC1Q96C34 613 aa22.77■■□□□ 1.24
ITGA5-213ENST00000553071 TNS2Q63HR2 1409 aa22.76■■□□□ 1.23
ITGA5-213ENST00000553071 C1orf141Q5JVX7 400 aa22.76■■□□□ 1.23
ITGA5-213ENST00000553071 DDX54Q8TDD1 881 aaKnown RBP22.76■■□□□ 1.23
ITGA5-213ENST00000553071 PLEKHF1Q96S99 279 aa22.76■■□□□ 1.23
ITGA5-213ENST00000553071 THSD7AQ9UPZ6 1657 aa22.75■■□□□ 1.23
ITGA5-213ENST00000553071 FAM9BQ8IZU0 186 aa22.75■■□□□ 1.23
ITGA5-213ENST00000553071 RGS12O14924 1447 aa22.74■■□□□ 1.23
ITGA5-213ENST00000553071 PARP4Q9UKK3 1724 aaKnown RBP22.74■■□□□ 1.23
ITGA5-213ENST00000553071 ZNF530Q6P9A1 599 aaPredicted RBP22.74■■□□□ 1.23
ITGA5-213ENST00000553071 AKAP4Q5JQC9 854 aa22.73■■□□□ 1.23
ITGA5-213ENST00000553071 FAM196AQ6ZSG2 479 aa22.73■■□□□ 1.23
ITGA5-213ENST00000553071 MTHFSDQ2M296 383 aaKnown RBP22.72■■□□□ 1.23
ITGA5-213ENST00000553071 PHACTR3Q96KR7 559 aa22.72■■□□□ 1.23
ITGA5-213ENST00000553071 PHKG2P15735 406 aa22.71■■□□□ 1.23
ITGA5-213ENST00000553071 NKX1-1Q15270 411 aaPredicted RBP22.71■■□□□ 1.23
ITGA5-213ENST00000553071 MARCH10Q8NA82 808 aaPredicted RBP22.71■■□□□ 1.23
ITGA5-213ENST00000553071 CYP27B1O15528 508 aa22.7■■□□□ 1.22
ITGA5-213ENST00000553071 HTATSF1O43719 755 aaKnown RBP22.7■■□□□ 1.22
ITGA5-213ENST00000553071 GNAT3A8MTJ3 354 aa22.69■■□□□ 1.22
ITGA5-213ENST00000553071 NFE2L2Q16236 605 aa22.69■■□□□ 1.22
ITGA5-213ENST00000553071 DCAF5Q96JK2 942 aa22.69■■□□□ 1.22
ITGA5-213ENST00000553071 WNK3Q9BYP7 1800 aa22.68■■□□□ 1.22
ITGA5-213ENST00000553071 BCL9O00512 1426 aa22.68■■□□□ 1.22
ITGA5-213ENST00000553071 LMOD3Q0VAK6 560 aa22.68■■□□□ 1.22
ITGA5-213ENST00000553071 NGEFQ8N5V2 710 aa22.68■■□□□ 1.22
ITGA5-213ENST00000553071 RTF1Q92541 710 aaKnown RBP22.68■■□□□ 1.22
ITGA5-213ENST00000553071 NCBP3Q53F19 620 aaKnown RBP22.67■■□□□ 1.22
ITGA5-213ENST00000553071 CCDC146Q8IYE0 955 aa22.67■■□□□ 1.22
ITGA5-213ENST00000553071 LRRC37A3O60309 1634 aa22.66■■□□□ 1.22
ITGA5-213ENST00000553071 TMPOP42166 694 aaKnown RBP22.65■■□□□ 1.22
ITGA5-213ENST00000553071 PKD1L3Q7Z443 1732 aa22.65■■□□□ 1.22
ITGA5-213ENST00000553071 ERVV-2B6SEH9 535 aa22.64■■□□□ 1.21
ITGA5-213ENST00000553071 RIPK4P57078 832 aa22.64■■□□□ 1.21
ITGA5-213ENST00000553071 MAP3K5Q99683 1374 aa22.63■■□□□ 1.21
ITGA5-213ENST00000553071 APAF1O14727 1248 aa22.63■■□□□ 1.21
ITGA5-213ENST00000553071 MPRIPQ6WCQ1 1025 aa22.6■■□□□ 1.21
ITGA5-213ENST00000553071 CCDC125Q86Z20 511 aa22.6■■□□□ 1.21
ITGA5-213ENST00000553071 RNMTO43148 476 aaKnown RBP22.59■■□□□ 1.21
ITGA5-213ENST00000553071 FAM182BQ5T319 152 aa22.59■■□□□ 1.21
ITGA5-213ENST00000553071 CABP4P57796 275 aa22.58■■□□□ 1.21
ITGA5-213ENST00000553071 CALD1Q05682 793 aaKnown RBP22.58■■□□□ 1.21
ITGA5-213ENST00000553071 NEUROD2Q15784 382 aa22.58■■□□□ 1.21
ITGA5-213ENST00000553071 BCL11BQ9C0K0 894 aaPredicted RBP22.58■■□□□ 1.21
ITGA5-213ENST00000553071 BRWD3Q6RI45 1802 aa22.57■■□□□ 1.2
ITGA5-213ENST00000553071 TEFQ10587 303 aa22.57■■□□□ 1.2
ITGA5-213ENST00000553071 CCDC27Q2M243 656 aa22.57■■□□□ 1.2
ITGA5-213ENST00000553071 PRIM1P49642 420 aaKnown RBP22.56■■□□□ 1.2
ITGA5-213ENST00000553071 SF3B2Q13435 895 aaKnown RBP22.56■■□□□ 1.2
ITGA5-213ENST00000553071 IL17REQ8NFR9 667 aa22.56■■□□□ 1.2
ITGA5-213ENST00000553071 SYTL4Q96C24 671 aaPredicted RBP22.56■■□□□ 1.2
ITGA5-213ENST00000553071 TMOD3Q9NYL9 352 aa22.56■■□□□ 1.2
ITGA5-213ENST00000553071 LGR6Q9HBX8 967 aa22.55■■□□□ 1.2
ITGA5-213ENST00000553071 RRP7AQ9Y3A4 280 aaKnown RBP22.55■■□□□ 1.2
ITGA5-213ENST00000553071 ACSBG1Q96GR2 724 aa22.54■■□□□ 1.2
ITGA5-213ENST00000553071 SLC52A2Q9HAB3 445 aa22.54■■□□□ 1.2
ITGA5-213ENST00000553071 CEMIPQ8WUJ3 1361 aa22.53■■□□□ 1.2
ITGA5-213ENST00000553071 TRIM37O94972 964 aa22.53■■□□□ 1.2
ITGA5-213ENST00000553071 SHANK3Q9BYB0 1731 aa22.53■■□□□ 1.2
ITGA5-213ENST00000553071 KDM6AO15550 1401 aaPredicted RBP22.52■■□□□ 1.2
ITGA5-213ENST00000553071 HMGB2P26583 209 aaKnown RBP22.52■■□□□ 1.2
ITGA5-213ENST00000553071 ILDR2Q71H61 639 aa22.52■■□□□ 1.2
ITGA5-213ENST00000553071 MCM10Q7L590 875 aa22.52■■□□□ 1.2
ITGA5-213ENST00000553071 NFATC2IPQ8NCF5 419 aa22.52■■□□□ 1.2
ITGA5-213ENST00000553071 TAF7Q15545 349 aaPredicted RBP22.51■■□□□ 1.19
ITGA5-213ENST00000553071 SMARCC1Q92922 1105 aaPredicted RBP22.51■■□□□ 1.19
ITGA5-213ENST00000553071 BABAM1Q9NWV8 329 aa22.51■■□□□ 1.19
ITGA5-213ENST00000553071 TRIM35Q9UPQ4 493 aa22.51■■□□□ 1.19
ITGA5-213ENST00000553071 KCNQ2O43526 872 aa22.5■■□□□ 1.19
ITGA5-213ENST00000553071 PIGBQ92521 554 aa22.5■■□□□ 1.19
ITGA5-213ENST00000553071 DCTN1Q14203 1278 aa22.49■■□□□ 1.19
ITGA5-213ENST00000553071 WDR63Q8IWG1 891 aa22.48■■□□□ 1.19
ITGA5-213ENST00000553071 WWC1Q8IX03 1113 aa22.48■■□□□ 1.19
ITGA5-213ENST00000553071 KAT6BQ8WYB5 2073 aa22.48■■□□□ 1.19
ITGA5-213ENST00000553071 APBA3O96018 575 aa22.47■■□□□ 1.19
ITGA5-213ENST00000553071 BTBD11A6QL63 1104 aa22.46■■□□□ 1.19
ITGA5-213ENST00000553071 PLSCR1O15162 318 aa22.46■■□□□ 1.19
ITGA5-213ENST00000553071 BAG6P46379 1132 aa22.45■■□□□ 1.18
ITGA5-213ENST00000553071 TTC5Q8N0Z6 440 aa22.45■■□□□ 1.18
ITGA5-213ENST00000553071 IL16Q14005 1332 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms