RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.93■□□□□ 0.3
HDAC7-228ENST00000548938 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
HDAC7-228ENST00000548938 KIF20BQ96Q89 1820 aa16.93■□□□□ 0.3
HDAC7-228ENST00000548938 OFD1O75665 1012 aa16.93■□□□□ 0.3
HDAC7-228ENST00000548938 GNAI1P63096 354 aa16.93■□□□□ 0.3
HDAC7-228ENST00000548938 NUCB2P80303 420 aa16.93■□□□□ 0.3
HDAC7-228ENST00000548938 C16orf71Q8IYS4 520 aaPredicted RBP16.93■□□□□ 0.3
HDAC7-228ENST00000548938 IFT57Q9NWB7 429 aa16.93■□□□□ 0.3
HDAC7-228ENST00000548938 CALD1Q05682 793 aaKnown RBP16.92■□□□□ 0.3
HDAC7-228ENST00000548938 C8orf58Q8NAV2 365 aa16.92■□□□□ 0.3
HDAC7-228ENST00000548938 USP26Q9BXU7 913 aa16.92■□□□□ 0.3
HDAC7-228ENST00000548938 FER1L4A9Z1Z3 1794 aa16.92■□□□□ 0.3
HDAC7-228ENST00000548938 ZNF853P0CG23 659 aa16.91■□□□□ 0.3
HDAC7-228ENST00000548938 TXNDC2Q86VQ3 553 aa16.91■□□□□ 0.3
HDAC7-228ENST00000548938 OTUD7AQ8TE49 926 aaPredicted RBP16.91■□□□□ 0.3
HDAC7-228ENST00000548938 RBSNQ9H1K0 784 aa16.91■□□□□ 0.3
HDAC7-228ENST00000548938 ZGPATQ8N5A5 531 aaKnown RBP16.9■□□□□ 0.3
HDAC7-228ENST00000548938 API5Q9BZZ5 524 aaKnown RBP16.9■□□□□ 0.3
HDAC7-228ENST00000548938 DCTPP1Q9H773 170 aa16.9■□□□□ 0.3
HDAC7-228ENST00000548938 ADAMTS13Q76LX8 1427 aa16.9■□□□□ 0.3
HDAC7-228ENST00000548938 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.9■□□□□ 0.3
HDAC7-228ENST00000548938 RBM27Q9P2N5 1060 aaKnown RBP16.9■□□□□ 0.3
HDAC7-228ENST00000548938 PRIM1P49642 420 aaKnown RBP16.89■□□□□ 0.29
HDAC7-228ENST00000548938 INTS3Q68E01 1043 aaKnown RBP16.89■□□□□ 0.29
HDAC7-228ENST00000548938 PDCL3Q9H2J4 239 aa16.89■□□□□ 0.29
HDAC7-228ENST00000548938 EMILIN1Q9Y6C2 1016 aa16.89■□□□□ 0.29
HDAC7-228ENST00000548938 PLEKHG1Q9ULL1 1385 aa16.88■□□□□ 0.29
HDAC7-228ENST00000548938 PRPF40AO75400 957 aaKnown RBP16.88■□□□□ 0.29
HDAC7-228ENST00000548938 GPT2Q8TD30 523 aa16.88■□□□□ 0.29
HDAC7-228ENST00000548938 CHAMP1Q96JM3 812 aa16.88■□□□□ 0.29
HDAC7-228ENST00000548938 TECPR2O15040 1411 aa16.88■□□□□ 0.29
HDAC7-228ENST00000548938 FAM83GA6ND36 823 aa16.87■□□□□ 0.29
HDAC7-228ENST00000548938 PDLIM2Q96JY6 352 aa16.87■□□□□ 0.29
HDAC7-228ENST00000548938 ATP10DQ9P241 1426 aa16.87■□□□□ 0.29
HDAC7-228ENST00000548938 SDSP20132 328 aa16.87■□□□□ 0.29
HDAC7-228ENST00000548938 CFAP44Q96MT7 982 aa16.87■□□□□ 0.29
HDAC7-228ENST00000548938 PODXL2Q9NZ53 605 aa16.87■□□□□ 0.29
HDAC7-228ENST00000548938 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.87■□□□□ 0.29
HDAC7-228ENST00000548938 ZDHHC9Q9Y397 364 aa16.87■□□□□ 0.29
HDAC7-228ENST00000548938 APBB1O00213 710 aa16.86■□□□□ 0.29
HDAC7-228ENST00000548938 SIRT1Q96EB6 747 aa16.86■□□□□ 0.29
HDAC7-228ENST00000548938 EID1Q9Y6B2 187 aa16.86■□□□□ 0.29
HDAC7-228ENST00000548938 SMARCA5O60264 1052 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-228ENST00000548938 NOL7Q9UMY1 257 aaKnown RBP16.86■□□□□ 0.29
HDAC7-228ENST00000548938 ST18O60284 1047 aa16.85■□□□□ 0.29
HDAC7-228ENST00000548938 IL13P35225 146 aa16.85■□□□□ 0.29
HDAC7-228ENST00000548938 HS1BP3Q53T59 392 aa16.85■□□□□ 0.29
HDAC7-228ENST00000548938 SLC26A8Q96RN1 970 aa16.85■□□□□ 0.29
HDAC7-228ENST00000548938 CWC22Q9HCG8 908 aaKnown RBP16.85■□□□□ 0.29
HDAC7-228ENST00000548938 R3HCC1Q9Y3T6 440 aaKnown RBP16.85■□□□□ 0.29
HDAC7-228ENST00000548938 ARHGAP23Q9P227 1491 aa16.85■□□□□ 0.29
HDAC7-228ENST00000548938 WASLO00401 505 aaPredicted RBP16.85■□□□□ 0.29
HDAC7-228ENST00000548938 RBM10P98175 930 aaKnown RBP16.85■□□□□ 0.29
HDAC7-228ENST00000548938 XPCQ01831 940 aaPredicted RBP16.85■□□□□ 0.29
HDAC7-228ENST00000548938 DCTN1Q14203 1278 aa16.85■□□□□ 0.29
HDAC7-228ENST00000548938 ANKRD44Q8N8A2 993 aa16.85■□□□□ 0.29
HDAC7-228ENST00000548938 SLIT1O75093 1534 aa16.84■□□□□ 0.29
HDAC7-228ENST00000548938 MAP2P11137 1827 aaKnown RBP16.84■□□□□ 0.29
HDAC7-228ENST00000548938 THEMISQ8N1K5 641 aaPredicted RBP16.84■□□□□ 0.29
HDAC7-228ENST00000548938 KIF24Q5T7B8 1368 aa16.84■□□□□ 0.29
HDAC7-228ENST00000548938 ROBO2Q9HCK4 1378 aa16.84■□□□□ 0.29
HDAC7-228ENST00000548938 TMEM63CQ9P1W3 806 aa16.83■□□□□ 0.29
HDAC7-228ENST00000548938 ZNF500O60304 480 aaPredicted RBP16.83■□□□□ 0.28
HDAC7-228ENST00000548938 CEP85Q6P2H3 762 aa16.83■□□□□ 0.28
HDAC7-228ENST00000548938 NSFL1CQ9UNZ2 370 aaKnown RBP16.83■□□□□ 0.28
HDAC7-228ENST00000548938 DLG5Q8TDM6 1919 aa16.83■□□□□ 0.28
HDAC7-228ENST00000548938 FOXD4L5Q5VV16 416 aaPredicted RBP16.83■□□□□ 0.28
HDAC7-228ENST00000548938 FOXD4L4Q8WXT5 416 aaPredicted RBP16.83■□□□□ 0.28
HDAC7-228ENST00000548938 CPS1P31327 1500 aa16.82■□□□□ 0.28
HDAC7-228ENST00000548938 RGS12O14924 1447 aa16.82■□□□□ 0.28
HDAC7-228ENST00000548938 SYCE3A1L190 88 aa16.82■□□□□ 0.28
HDAC7-228ENST00000548938 TERF1P54274 439 aa16.82■□□□□ 0.28
HDAC7-228ENST00000548938 CASC1Q6TDU7 716 aa16.82■□□□□ 0.28
HDAC7-228ENST00000548938 LMOD3Q0VAK6 560 aa16.82■□□□□ 0.28
HDAC7-228ENST00000548938 KRT24Q2M2I5 525 aa16.82■□□□□ 0.28
HDAC7-228ENST00000548938 MSH6P52701 1360 aa16.81■□□□□ 0.28
HDAC7-228ENST00000548938 ZRANB1Q9UGI0 708 aa16.81■□□□□ 0.28
HDAC7-228ENST00000548938 LRSAM1Q6UWE0 723 aa16.81■□□□□ 0.28
HDAC7-228ENST00000548938 NME9Q86XW9 330 aa16.81■□□□□ 0.28
HDAC7-228ENST00000548938 ZKSCAN5Q9Y2L8 839 aa16.81■□□□□ 0.28
HDAC7-228ENST00000548938 ATP7BP35670 1465 aa16.8■□□□□ 0.28
HDAC7-228ENST00000548938 CDK12Q9NYV4 1490 aaPredicted RBP16.8■□□□□ 0.28
HDAC7-228ENST00000548938 REC8O95072 547 aa16.8■□□□□ 0.28
HDAC7-228ENST00000548938 RPAP2Q8IXW5 612 aaPredicted RBP16.8■□□□□ 0.28
HDAC7-228ENST00000548938 PTPRUQ92729 1446 aa16.8■□□□□ 0.28
HDAC7-228ENST00000548938 RTL1A6NKG5 1358 aa16.79■□□□□ 0.28
HDAC7-228ENST00000548938 FAM13BQ9NYF5 915 aa16.79■□□□□ 0.28
HDAC7-228ENST00000548938 MEIS3Q99687 375 aa16.79■□□□□ 0.28
HDAC7-228ENST00000548938 NCKAP5LQ9HCH0 1330 aa16.78■□□□□ 0.28
HDAC7-228ENST00000548938 NUDT16Q96DE0 195 aaKnown RBP16.78■□□□□ 0.28
HDAC7-228ENST00000548938 TBX22Q9Y458 520 aa16.78■□□□□ 0.28
HDAC7-228ENST00000548938 UQCRHLA0A096LP55 91 aa16.78■□□□□ 0.28
HDAC7-228ENST00000548938 ERC2O15083 957 aa16.78■□□□□ 0.28
HDAC7-228ENST00000548938 UQCRHP07919 91 aa16.78■□□□□ 0.28
HDAC7-228ENST00000548938 RRS1Q15050 365 aaKnown RBP16.78■□□□□ 0.28
HDAC7-228ENST00000548938 RNF214Q8ND24 703 aa16.78■□□□□ 0.28
HDAC7-228ENST00000548938 RIMS1Q86UR5 1692 aaKnown RBP16.77■□□□□ 0.28
HDAC7-228ENST00000548938 CPSF1Q10570 1443 aaKnown RBP16.77■□□□□ 0.27
HDAC7-228ENST00000548938 AMOTL2Q9Y2J4 779 aa16.76■□□□□ 0.27
HDAC7-228ENST00000548938 CCDC61Q9Y6R9 512 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms