RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 XRN1Q8IZH2 1706 aaKnown RBP12.49□□□□□ -0.41
NUP85-203ENST00000540768 CHL1O00533 1208 aa12.49□□□□□ -0.41
NUP85-203ENST00000540768 BCL11AQ9H165 835 aa12.49□□□□□ -0.41
NUP85-203ENST00000540768 C19orf44Q9H6X5 657 aa12.49□□□□□ -0.41
NUP85-203ENST00000540768 ARHGEF10O15013 1369 aa12.49□□□□□ -0.41
NUP85-203ENST00000540768 KIF24Q5T7B8 1368 aa12.49□□□□□ -0.41
NUP85-203ENST00000540768 ATF3P18847 181 aa12.49□□□□□ -0.41
NUP85-203ENST00000540768 BECN1Q14457 450 aa12.49□□□□□ -0.41
NUP85-203ENST00000540768 CADPS2Q86UW7 1296 aa12.49□□□□□ -0.41
NUP85-203ENST00000540768 CHD1LQ86WJ1 897 aa12.49□□□□□ -0.41
NUP85-203ENST00000540768 API5Q9BZZ5 524 aaKnown RBP12.49□□□□□ -0.41
NUP85-203ENST00000540768 XIRP1Q702N8 1843 aaKnown RBP12.48□□□□□ -0.41
NUP85-203ENST00000540768 RGPD8O14715 1765 aaPredicted RBP12.48□□□□□ -0.41
NUP85-203ENST00000540768 MAP3K19Q56UN5 1328 aa12.48□□□□□ -0.41
NUP85-203ENST00000540768 POTEAQ6S8J7 498 aa12.48□□□□□ -0.41
NUP85-203ENST00000540768 SIRT2Q8IXJ6 389 aa12.48□□□□□ -0.41
NUP85-203ENST00000540768 GCC1Q96CN9 775 aa12.48□□□□□ -0.41
NUP85-203ENST00000540768 KIAA0232Q92628 1395 aa12.47□□□□□ -0.41
NUP85-203ENST00000540768 FMN2Q9NZ56 1722 aa12.47□□□□□ -0.41
NUP85-203ENST00000540768 CRB1P82279 1406 aa12.47□□□□□ -0.41
NUP85-203ENST00000540768 SBNO1A3KN83 1393 aa12.47□□□□□ -0.41
NUP85-203ENST00000540768 NWD1Q149M9 1564 aa12.47□□□□□ -0.41
NUP85-203ENST00000540768 MCM10Q7L590 875 aa12.47□□□□□ -0.41
NUP85-203ENST00000540768 LNPKQ9C0E8 428 aa12.47□□□□□ -0.41
NUP85-203ENST00000540768 C1orf115Q9H7X2 142 aa12.47□□□□□ -0.41
NUP85-203ENST00000540768 PIK3C2AO00443 1686 aa12.46□□□□□ -0.41
NUP85-203ENST00000540768 ROBO1Q9Y6N7 1651 aa12.46□□□□□ -0.42
NUP85-203ENST00000540768 RGS12O14924 1447 aa12.46□□□□□ -0.42
NUP85-203ENST00000540768 ANKARQ7Z5J8 1434 aa12.46□□□□□ -0.42
NUP85-203ENST00000540768 NCOA3Q9Y6Q9 1424 aa12.46□□□□□ -0.42
NUP85-203ENST00000540768 FLT4P35916 1363 aa12.46□□□□□ -0.42
NUP85-203ENST00000540768 KDRP35968 1356 aa12.46□□□□□ -0.42
NUP85-203ENST00000540768 TBC1D2Q9BYX2 928 aa12.45□□□□□ -0.42
NUP85-203ENST00000540768 C22orf23Q9BZE7 217 aa12.45□□□□□ -0.42
NUP85-203ENST00000540768 JCADQ9P266 1359 aa12.45□□□□□ -0.42
NUP85-203ENST00000540768 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
NUP85-203ENST00000540768 INTS3Q68E01 1043 aaKnown RBP12.45□□□□□ -0.42
NUP85-203ENST00000540768 NGDNQ8NEJ9 315 aaKnown RBP12.45□□□□□ -0.42
NUP85-203ENST00000540768 ANTXR1Q9H6X2 564 aa12.45□□□□□ -0.42
NUP85-203ENST00000540768 SOX12O15370 315 aa12.44□□□□□ -0.42
NUP85-203ENST00000540768 FRAT2O75474 233 aaPredicted RBP12.44□□□□□ -0.42
NUP85-203ENST00000540768 HAP1P54257 671 aaPredicted RBP12.44□□□□□ -0.42
NUP85-203ENST00000540768 MFAP1P55081 439 aaKnown RBP12.44□□□□□ -0.42
NUP85-203ENST00000540768 ANKRD45Q5TZF3 282 aa12.44□□□□□ -0.42
NUP85-203ENST00000540768 IGSF1Q8N6C5 1336 aa12.43□□□□□ -0.42
NUP85-203ENST00000540768 MTHFSDQ2M296 383 aaKnown RBP12.43□□□□□ -0.42
NUP85-203ENST00000540768 BMP2KLQ5H9B9 411 aa12.43□□□□□ -0.42
NUP85-203ENST00000540768 MARF1Q9Y4F3 1742 aaKnown RBP12.43□□□□□ -0.42
NUP85-203ENST00000540768 USP54Q70EL1 1684 aa12.43□□□□□ -0.42
NUP85-203ENST00000540768 EYA1Q99502 592 aa12.43□□□□□ -0.42
NUP85-203ENST00000540768 FOXO3O43524 673 aa12.42□□□□□ -0.42
NUP85-203ENST00000540768 BRINP3Q76B58 766 aa12.41□□□□□ -0.42
NUP85-203ENST00000540768 PTPRCP08575 1304 aa12.41□□□□□ -0.42
NUP85-203ENST00000540768 AMPHP49418 695 aa12.41□□□□□ -0.42
NUP85-203ENST00000540768 RBM25P49756 843 aaKnown RBP12.41□□□□□ -0.42
NUP85-203ENST00000540768 GSE1Q14687 1217 aa12.41□□□□□ -0.42
NUP85-203ENST00000540768 MEX3CQ5U5Q3 659 aaKnown RBP12.41□□□□□ -0.42
NUP85-203ENST00000540768 SLKQ9H2G2 1235 aaPredicted RBP12.4□□□□□ -0.42
NUP85-203ENST00000540768 DCTPP1Q9H773 170 aa12.4□□□□□ -0.42
NUP85-203ENST00000540768 ATP10DQ9P241 1426 aa12.4□□□□□ -0.42
NUP85-203ENST00000540768 SPATA31A6Q5VVP1 1343 aa12.4□□□□□ -0.42
NUP85-203ENST00000540768 NLRP6P59044 892 aa12.39□□□□□ -0.43
NUP85-203ENST00000540768 ANKRD44Q8N8A2 993 aa12.39□□□□□ -0.43
NUP85-203ENST00000540768 GAS2L2Q8NHY3 880 aa12.39□□□□□ -0.43
NUP85-203ENST00000540768 MIS18AQ9NYP9 233 aa12.39□□□□□ -0.43
NUP85-203ENST00000540768 CHD2O14647 1828 aaKnown RBP12.39□□□□□ -0.43
NUP85-203ENST00000540768 HTATSF1O43719 755 aaKnown RBP12.39□□□□□ -0.43
NUP85-203ENST00000540768 HOXC9P31274 260 aa12.39□□□□□ -0.43
NUP85-203ENST00000540768 RTF1Q92541 710 aaKnown RBP12.39□□□□□ -0.43
NUP85-203ENST00000540768 LRRC37A3O60309 1634 aa12.38□□□□□ -0.43
NUP85-203ENST00000540768 NUTM2BA6NNL0 878 aaPredicted RBP12.38□□□□□ -0.43
NUP85-203ENST00000540768 NUTM2EB1AL46 878 aaPredicted RBP12.38□□□□□ -0.43
NUP85-203ENST00000540768 NUTM2AQ8IVF1 878 aaPredicted RBP12.38□□□□□ -0.43
NUP85-203ENST00000540768 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
NUP85-203ENST00000540768 RPAP2Q8IXW5 612 aaPredicted RBP12.37□□□□□ -0.43
NUP85-203ENST00000540768 TSPYL4Q9UJ04 414 aa12.37□□□□□ -0.43
NUP85-203ENST00000540768 RTL1A6NKG5 1358 aa12.37□□□□□ -0.43
NUP85-203ENST00000540768 CEP85Q6P2H3 762 aa12.37□□□□□ -0.43
NUP85-203ENST00000540768 PLEKHM2Q8IWE5 1019 aa12.37□□□□□ -0.43
NUP85-203ENST00000540768 NUTM2GQ5VZR2 741 aa12.36□□□□□ -0.43
NUP85-203ENST00000540768 ZNF772Q68DY9 489 aaPredicted RBP12.36□□□□□ -0.43
NUP85-203ENST00000540768 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
NUP85-203ENST00000540768 PHLPP1O60346 1717 aa12.36□□□□□ -0.43
NUP85-203ENST00000540768 G2E3Q7L622 706 aa12.35□□□□□ -0.43
NUP85-203ENST00000540768 ABTB2Q8N961 1025 aa12.35□□□□□ -0.43
NUP85-203ENST00000540768 SNX21Q969T3 373 aa12.35□□□□□ -0.43
NUP85-203ENST00000540768 MEIS3Q99687 375 aa12.35□□□□□ -0.43
NUP85-203ENST00000540768 GSPT1P15170 499 aaKnown RBP12.35□□□□□ -0.43
NUP85-203ENST00000540768 DDX17Q92841 729 aaKnown RBP12.35□□□□□ -0.43
NUP85-203ENST00000540768 KIF2CQ99661 725 aa12.35□□□□□ -0.43
NUP85-203ENST00000540768 DCCP43146 1447 aa12.34□□□□□ -0.43
NUP85-203ENST00000540768 GNAT3A8MTJ3 354 aa12.34□□□□□ -0.43
NUP85-203ENST00000540768 LRRC59Q96AG4 307 aaKnown RBP12.34□□□□□ -0.43
NUP85-203ENST00000540768 PHF8Q9UPP1 1060 aa12.34□□□□□ -0.43
NUP85-203ENST00000540768 LRP6O75581 1613 aa12.34□□□□□ -0.43
NUP85-203ENST00000540768 COL16A1Q07092 1604 aaPredicted RBP12.34□□□□□ -0.43
NUP85-203ENST00000540768 MST1RQ04912 1400 aa12.33□□□□□ -0.44
NUP85-203ENST00000540768 MAP3K5Q99683 1374 aa12.33□□□□□ -0.44
NUP85-203ENST00000540768 CDC45O75419 566 aa12.33□□□□□ -0.44
NUP85-203ENST00000540768 TTC22Q5TAA0 569 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms