RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 PLEKHM2Q8IWE5 1019 aa8.74□□□□□ -1.01
PROM1-219ENST00000539194 TTC21BQ7Z4L5 1316 aa8.74□□□□□ -1.01
PROM1-219ENST00000539194 RAB3GAP1Q15042 981 aa8.73□□□□□ -1.01
PROM1-219ENST00000539194 TWISTNBQ3B726 338 aaPredicted RBP8.73□□□□□ -1.01
PROM1-219ENST00000539194 TBC1D9Q6ZT07 1266 aa8.73□□□□□ -1.01
PROM1-219ENST00000539194 PXDNLA1KZ92 1463 aa8.73□□□□□ -1.01
PROM1-219ENST00000539194 CYP2E1P05181 493 aaPredicted RBP8.73□□□□□ -1.01
PROM1-219ENST00000539194 SLKQ9H2G2 1235 aaPredicted RBP8.73□□□□□ -1.01
PROM1-219ENST00000539194 NCAPD2Q15021 1401 aa8.73□□□□□ -1.01
PROM1-219ENST00000539194 LMTK3Q96Q04 1460 aa8.73□□□□□ -1.01
PROM1-219ENST00000539194 FAM43AQ8N2R8 423 aa8.73□□□□□ -1.01
PROM1-219ENST00000539194 CHMP5Q9NZZ3 219 aa8.73□□□□□ -1.01
PROM1-219ENST00000539194 RRS1Q15050 365 aaKnown RBP8.72□□□□□ -1.01
PROM1-219ENST00000539194 TXNDC2Q86VQ3 553 aa8.72□□□□□ -1.01
PROM1-219ENST00000539194 LNPKQ9C0E8 428 aa8.72□□□□□ -1.01
PROM1-219ENST00000539194 XRCC6P12956 609 aaKnown RBP eCLIP8.72□□□□□ -1.01
PROM1-219ENST00000539194 LTKP29376 864 aa8.72□□□□□ -1.01
PROM1-219ENST00000539194 AEBP1Q8IUX7 1158 aa8.72□□□□□ -1.01
PROM1-219ENST00000539194 ANKRD44Q8N8A2 993 aa8.72□□□□□ -1.01
PROM1-219ENST00000539194 CIZ1Q9ULV3 898 aaPredicted RBP8.72□□□□□ -1.01
PROM1-219ENST00000539194 MSH6P52701 1360 aa8.71□□□□□ -1.01
PROM1-219ENST00000539194 OSBPL3Q9H4L5 887 aa8.71□□□□□ -1.01
PROM1-219ENST00000539194 UPF2Q9HAU5 1272 aaKnown RBP8.71□□□□□ -1.01
PROM1-219ENST00000539194 IGSF1Q8N6C5 1336 aa8.71□□□□□ -1.02
PROM1-219ENST00000539194 MFAP1P55081 439 aaKnown RBP8.71□□□□□ -1.02
PROM1-219ENST00000539194 ANKARQ7Z5J8 1434 aa8.71□□□□□ -1.02
PROM1-219ENST00000539194 LMOD3Q0VAK6 560 aa8.71□□□□□ -1.02
PROM1-219ENST00000539194 CEP85Q6P2H3 762 aa8.71□□□□□ -1.02
PROM1-219ENST00000539194 PTPRCP08575 1304 aa8.7□□□□□ -1.02
PROM1-219ENST00000539194 ACEP12821 1306 aa8.7□□□□□ -1.02
PROM1-219ENST00000539194 DAXXQ9UER7 740 aaPredicted RBP8.7□□□□□ -1.02
PROM1-219ENST00000539194 TRPM3Q9HCF6 1732 aaPredicted RBP8.7□□□□□ -1.02
PROM1-219ENST00000539194 IBTKQ9P2D0 1353 aaPredicted RBP8.7□□□□□ -1.02
PROM1-219ENST00000539194 COG3Q96JB2 828 aa8.7□□□□□ -1.02
PROM1-219ENST00000539194 DNAJC5Q9H3Z4 198 aa8.7□□□□□ -1.02
PROM1-219ENST00000539194 C1orf115Q9H7X2 142 aa8.7□□□□□ -1.02
PROM1-219ENST00000539194 SBNO1A3KN83 1393 aa8.7□□□□□ -1.02
PROM1-219ENST00000539194 DCTN1Q14203 1278 aa8.69□□□□□ -1.02
PROM1-219ENST00000539194 TTC22Q5TAA0 569 aa8.69□□□□□ -1.02
PROM1-219ENST00000539194 API5Q9BZZ5 524 aaKnown RBP8.69□□□□□ -1.02
PROM1-219ENST00000539194 MAP3K19Q56UN5 1328 aa8.69□□□□□ -1.02
PROM1-219ENST00000539194 KRT24Q2M2I5 525 aa8.69□□□□□ -1.02
PROM1-219ENST00000539194 CHMP4BQ9H444 224 aaKnown RBP8.69□□□□□ -1.02
PROM1-219ENST00000539194 TNPO1Q92973 898 aaKnown RBP8.69□□□□□ -1.02
PROM1-219ENST00000539194 USP26Q9BXU7 913 aa8.69□□□□□ -1.02
PROM1-219ENST00000539194 RRAGDQ9NQL2 400 aaPredicted RBP8.69□□□□□ -1.02
PROM1-219ENST00000539194 TTC21AQ8NDW8 1320 aa8.68□□□□□ -1.02
PROM1-219ENST00000539194 TRHP20396 242 aaPredicted RBP8.68□□□□□ -1.02
PROM1-219ENST00000539194 ANKRD45Q5TZF3 282 aa8.67□□□□□ -1.02
PROM1-219ENST00000539194 RBM42Q9BTD8 480 aaKnown RBP8.67□□□□□ -1.02
PROM1-219ENST00000539194 FLT4P35916 1363 aa8.67□□□□□ -1.02
PROM1-219ENST00000539194 TRAK2O60296 914 aa8.67□□□□□ -1.02
PROM1-219ENST00000539194 HSP90AB2PQ58FF8 381 aa8.67□□□□□ -1.02
PROM1-219ENST00000539194 RPAP2Q8IXW5 612 aaPredicted RBP8.67□□□□□ -1.02
PROM1-219ENST00000539194 SENP3Q9H4L4 574 aaPredicted RBP8.67□□□□□ -1.02
PROM1-219ENST00000539194 CEMIPQ8WUJ3 1361 aa8.67□□□□□ -1.02
PROM1-219ENST00000539194 GAS2L2Q8NHY3 880 aa8.67□□□□□ -1.02
PROM1-219ENST00000539194 ISY1Q9ULR0 285 aaKnown RBP8.67□□□□□ -1.02
PROM1-219ENST00000539194 K7ELQ4 463 aaPredicted RBP8.66□□□□□ -1.02
PROM1-219ENST00000539194 GAS2L3Q86XJ1 694 aa8.66□□□□□ -1.02
PROM1-219ENST00000539194 C16orf71Q8IYS4 520 aaPredicted RBP8.66□□□□□ -1.02
PROM1-219ENST00000539194 OTUD7AQ8TE49 926 aaPredicted RBP8.66□□□□□ -1.02
PROM1-219ENST00000539194 ANO8Q9HCE9 1232 aaPredicted RBP8.66□□□□□ -1.02
PROM1-219ENST00000539194 SLIT3O75094 1523 aa8.66□□□□□ -1.02
PROM1-219ENST00000539194 SULT6B1Q6IMI4 303 aa8.66□□□□□ -1.02
PROM1-219ENST00000539194 GLI3P10071 1580 aa8.66□□□□□ -1.02
PROM1-219ENST00000539194 MST1RQ04912 1400 aa8.66□□□□□ -1.02
PROM1-219ENST00000539194 CDC45O75419 566 aa8.65□□□□□ -1.02
PROM1-219ENST00000539194 PANK2Q9BZ23 570 aa8.65□□□□□ -1.02
PROM1-219ENST00000539194 MTHFSDQ2M296 383 aaKnown RBP8.65□□□□□ -1.02
PROM1-219ENST00000539194 HTATSF1O43719 755 aaKnown RBP8.65□□□□□ -1.03
PROM1-219ENST00000539194 L1TD1Q5T7N2 865 aaKnown RBP8.65□□□□□ -1.03
PROM1-219ENST00000539194 MCM10Q7L590 875 aa8.65□□□□□ -1.03
PROM1-219ENST00000539194 MEIS3Q99687 375 aa8.65□□□□□ -1.03
PROM1-219ENST00000539194 TBX22Q9Y458 520 aa8.65□□□□□ -1.03
PROM1-219ENST00000539194 DDX11L8A8MPP1 907 aa8.64□□□□□ -1.03
PROM1-219ENST00000539194 SDSP20132 328 aa8.64□□□□□ -1.03
PROM1-219ENST00000539194 ZDHHC9Q9Y397 364 aa8.64□□□□□ -1.03
PROM1-219ENST00000539194 SOS1Q07889 1333 aaPredicted RBP8.64□□□□□ -1.03
PROM1-219ENST00000539194 HSCBQ8IWL3 235 aa8.64□□□□□ -1.03
PROM1-219ENST00000539194 C5P01031 1676 aa8.64□□□□□ -1.03
PROM1-219ENST00000539194 ALS2Q96Q42 1657 aa8.64□□□□□ -1.03
PROM1-219ENST00000539194 ELL2O00472 640 aaPredicted RBP8.64□□□□□ -1.03
PROM1-219ENST00000539194 G2E3Q7L622 706 aa8.64□□□□□ -1.03
PROM1-219ENST00000539194 RTN4Q9NQC3 1192 aaKnown RBP8.64□□□□□ -1.03
PROM1-219ENST00000539194 RGPD5Q99666 1765 aa8.64□□□□□ -1.03
PROM1-219ENST00000539194 FOXO3O43524 673 aa8.63□□□□□ -1.03
PROM1-219ENST00000539194 SCN11AQ9UI33 1791 aa8.63□□□□□ -1.03
PROM1-219ENST00000539194 HEG1Q9ULI3 1381 aa8.63□□□□□ -1.03
PROM1-219ENST00000539194 BABAM1Q9NWV8 329 aa8.63□□□□□ -1.03
PROM1-219ENST00000539194 STAG3Q9UJ98 1225 aa8.63□□□□□ -1.03
PROM1-219ENST00000539194 EYA1Q99502 592 aa8.63□□□□□ -1.03
PROM1-219ENST00000539194 COL18A1P39060 1754 aa8.63□□□□□ -1.03
PROM1-219ENST00000539194 ERBB4Q15303 1308 aa8.62□□□□□ -1.03
PROM1-219ENST00000539194 HDGFP51858 240 aaKnown RBP8.62□□□□□ -1.03
PROM1-219ENST00000539194 STAP2Q9UGK3 403 aa8.62□□□□□ -1.03
PROM1-219ENST00000539194 MRC1P22897 1456 aa8.62□□□□□ -1.03
PROM1-219ENST00000539194 OVOS2A0A0G2JMS6 1433 aa8.62□□□□□ -1.03
PROM1-219ENST00000539194 ABCC6O95255 1503 aa8.62□□□□□ -1.03
PROM1-219ENST00000539194 SPRYD3Q8NCJ5 442 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms