RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 BCL11BQ9C0K0 894 aaPredicted RBP11.53□□□□□ -0.56
SPARC-208ENST00000538026 RREB1Q92766 1687 aa11.52□□□□□ -0.56
SPARC-208ENST00000538026 CC2D1BQ5T0F9 858 aaKnown RBP11.52□□□□□ -0.57
SPARC-208ENST00000538026 DDX54Q8TDD1 881 aaKnown RBP11.52□□□□□ -0.57
SPARC-208ENST00000538026 ACSBG1Q96GR2 724 aa11.52□□□□□ -0.57
SPARC-208ENST00000538026 GOLGB1Q14789 3259 aaKnown RBP11.52□□□□□ -0.57
SPARC-208ENST00000538026 NUP188Q5SRE5 1749 aa11.52□□□□□ -0.57
SPARC-208ENST00000538026 CYP27B1O15528 508 aa11.51□□□□□ -0.57
SPARC-208ENST00000538026 ZCRB1Q8TBF4 217 aaKnown RBP11.51□□□□□ -0.57
SPARC-208ENST00000538026 NHSQ6T4R5 1651 aa11.51□□□□□ -0.57
SPARC-208ENST00000538026 NPC1L1Q9UHC9 1359 aa11.51□□□□□ -0.57
SPARC-208ENST00000538026 BTAF1O14981 1849 aa11.51□□□□□ -0.57
SPARC-208ENST00000538026 PLSCR1O15162 318 aa11.5□□□□□ -0.57
SPARC-208ENST00000538026 PKD1L3Q7Z443 1732 aa11.49□□□□□ -0.57
SPARC-208ENST00000538026 IL13P35225 146 aa11.49□□□□□ -0.57
SPARC-208ENST00000538026 MTHFSP49914 203 aa11.49□□□□□ -0.57
SPARC-208ENST00000538026 AEBP1Q8IUX7 1158 aa11.49□□□□□ -0.57
SPARC-208ENST00000538026 IGSF1Q8N6C5 1336 aa11.49□□□□□ -0.57
SPARC-208ENST00000538026 RGPD3A6NKT7 1758 aaPredicted RBP11.49□□□□□ -0.57
SPARC-208ENST00000538026 RGPD4Q7Z3J3 1758 aa11.49□□□□□ -0.57
SPARC-208ENST00000538026 PSDA5PKW4 1024 aaPredicted RBP11.48□□□□□ -0.57
SPARC-208ENST00000538026 TATP17735 454 aaPredicted RBP11.48□□□□□ -0.57
SPARC-208ENST00000538026 CNGB1Q14028 1251 aaPredicted RBP11.48□□□□□ -0.57
SPARC-208ENST00000538026 TOGARAM1Q9Y4F4 1720 aa11.48□□□□□ -0.57
SPARC-208ENST00000538026 DOT1LQ8TEK3 1739 aa11.47□□□□□ -0.57
SPARC-208ENST00000538026 PARD3Q8TEW0 1356 aa11.47□□□□□ -0.57
SPARC-208ENST00000538026 PRIM1P49642 420 aaKnown RBP11.47□□□□□ -0.57
SPARC-208ENST00000538026 RAPGEF4Q8WZA2 1011 aa11.47□□□□□ -0.57
SPARC-208ENST00000538026 ANO8Q9HCE9 1232 aaPredicted RBP11.47□□□□□ -0.57
SPARC-208ENST00000538026 ITGB4P16144 1822 aa11.46□□□□□ -0.57
SPARC-208ENST00000538026 COL3A1P02461 1466 aaPredicted RBP11.46□□□□□ -0.57
SPARC-208ENST00000538026 R3HDM1Q15032 1099 aaKnown RBP11.46□□□□□ -0.57
SPARC-208ENST00000538026 LRRC4BQ9NT99 713 aa11.46□□□□□ -0.57
SPARC-208ENST00000538026 NKX1-1Q15270 411 aaPredicted RBP11.45□□□□□ -0.58
SPARC-208ENST00000538026 TXNRD1Q16881 649 aa11.45□□□□□ -0.58
SPARC-208ENST00000538026 KDRP35968 1356 aa11.44□□□□□ -0.58
SPARC-208ENST00000538026 PDGFDQ9GZP0 370 aaPredicted RBP11.44□□□□□ -0.58
SPARC-208ENST00000538026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.44□□□□□ -0.58
SPARC-208ENST00000538026 PHKG2P15735 406 aa11.43□□□□□ -0.58
SPARC-208ENST00000538026 KCNQ4P56696 695 aa11.43□□□□□ -0.58
SPARC-208ENST00000538026 SULT6B1Q6IMI4 303 aa11.43□□□□□ -0.58
SPARC-208ENST00000538026 LY75O60449 1722 aa11.43□□□□□ -0.58
SPARC-208ENST00000538026 PAPPAQ13219 1627 aa11.42□□□□□ -0.58
SPARC-208ENST00000538026 PCDH11XQ9BZA7 1347 aa11.42□□□□□ -0.58
SPARC-208ENST00000538026 PCDH11YQ9BZA8 1340 aa11.42□□□□□ -0.58
SPARC-208ENST00000538026 PPP2R1AP30153 589 aa11.42□□□□□ -0.58
SPARC-208ENST00000538026 PIGBQ92521 554 aa11.41□□□□□ -0.58
SPARC-208ENST00000538026 SYTL4Q96C24 671 aaPredicted RBP11.41□□□□□ -0.58
SPARC-208ENST00000538026 HMOX1P09601 288 aa11.4□□□□□ -0.58
SPARC-208ENST00000538026 DDX10Q13206 875 aaKnown RBP11.4□□□□□ -0.58
SPARC-208ENST00000538026 ZNF827Q17R98 1081 aa11.4□□□□□ -0.58
SPARC-208ENST00000538026 SPG7Q9UQ90 795 aa11.4□□□□□ -0.58
SPARC-208ENST00000538026 CASZ1Q86V15 1759 aa11.39□□□□□ -0.59
SPARC-208ENST00000538026 KDM6AO15550 1401 aaPredicted RBP11.39□□□□□ -0.59
SPARC-208ENST00000538026 DIAPH1O60610 1272 aaKnown RBP11.39□□□□□ -0.59
SPARC-208ENST00000538026 MPRIPQ6WCQ1 1025 aa11.39□□□□□ -0.59
SPARC-208ENST00000538026 IFNL2Q8IZJ0 200 aa11.39□□□□□ -0.59
SPARC-208ENST00000538026 PLEKHG2Q9H7P9 1386 aa11.39□□□□□ -0.59
SPARC-208ENST00000538026 TUBGCP6Q96RT7 1819 aa11.38□□□□□ -0.59
SPARC-208ENST00000538026 AKT1S1Q96B36 256 aa11.38□□□□□ -0.59
SPARC-208ENST00000538026 VIRMAQ69YN4 1812 aaKnown RBP11.37□□□□□ -0.59
SPARC-208ENST00000538026 TAF1LQ8IZX4 1826 aa11.37□□□□□ -0.59
SPARC-208ENST00000538026 SLC15A2Q16348 729 aa11.37□□□□□ -0.59
SPARC-208ENST00000538026 PLEKHO1Q53GL0 409 aaPredicted RBP11.37□□□□□ -0.59
SPARC-208ENST00000538026 ZNF530Q6P9A1 599 aaPredicted RBP11.37□□□□□ -0.59
SPARC-208ENST00000538026 ASAP1Q9ULH1 1129 aa11.37□□□□□ -0.59
SPARC-208ENST00000538026 SCN11AQ9UI33 1791 aa11.36□□□□□ -0.59
SPARC-208ENST00000538026 LRP5O75197 1615 aa11.36□□□□□ -0.59
SPARC-208ENST00000538026 MTHFSDQ2M296 383 aaKnown RBP11.36□□□□□ -0.59
SPARC-208ENST00000538026 AMOTQ4VCS5 1084 aa11.36□□□□□ -0.59
SPARC-208ENST00000538026 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
SPARC-208ENST00000538026 AMIGO3Q86WK7 504 aa11.36□□□□□ -0.59
SPARC-208ENST00000538026 SLC4A9Q96Q91 983 aa11.36□□□□□ -0.59
SPARC-208ENST00000538026 LGR6Q9HBX8 967 aa11.36□□□□□ -0.59
SPARC-208ENST00000538026 ATG3Q9NT62 314 aa11.36□□□□□ -0.59
SPARC-208ENST00000538026 SLC27A3Q5K4L6 730 aa11.35□□□□□ -0.59
SPARC-208ENST00000538026 PHACTR3Q96KR7 559 aa11.35□□□□□ -0.59
SPARC-208ENST00000538026 RSPH6AQ9H0K4 717 aa11.35□□□□□ -0.59
SPARC-208ENST00000538026 ADAMTS7Q9UKP4 1686 aa11.34□□□□□ -0.59
SPARC-208ENST00000538026 PALLDQ8WX93 1383 aa11.34□□□□□ -0.59
SPARC-208ENST00000538026 ERVV-2B6SEH9 535 aa11.34□□□□□ -0.59
SPARC-208ENST00000538026 DCAF5Q96JK2 942 aa11.34□□□□□ -0.59
SPARC-208ENST00000538026 U2SURPO15042 1029 aaKnown RBP11.33□□□□□ -0.6
SPARC-208ENST00000538026 PTGER2P43116 358 aa11.33□□□□□ -0.6
SPARC-208ENST00000538026 ITPK1Q13572 414 aa11.33□□□□□ -0.6
SPARC-208ENST00000538026 SMIM5Q71RC9 77 aa11.33□□□□□ -0.6
SPARC-208ENST00000538026 STK32BQ9NY57 414 aa11.33□□□□□ -0.6
SPARC-208ENST00000538026 CCNL1Q9UK58 526 aaPredicted RBP11.33□□□□□ -0.6
SPARC-208ENST00000538026 MYH14Q7Z406 1995 aaKnown RBP11.33□□□□□ -0.6
SPARC-208ENST00000538026 PNPLA7Q6ZV29 1317 aa11.33□□□□□ -0.6
SPARC-208ENST00000538026 QSER1Q2KHR3 1735 aa11.32□□□□□ -0.6
SPARC-208ENST00000538026 ZBTB7AO95365 584 aa11.32□□□□□ -0.6
SPARC-208ENST00000538026 ZEB1P37275 1124 aaPredicted RBP11.32□□□□□ -0.6
SPARC-208ENST00000538026 AKAP4Q5JQC9 854 aa11.32□□□□□ -0.6
SPARC-208ENST00000538026 NFATC2IPQ8NCF5 419 aa11.32□□□□□ -0.6
SPARC-208ENST00000538026 SGIP1Q9BQI5 828 aa11.32□□□□□ -0.6
SPARC-208ENST00000538026 TMOD3Q9NYL9 352 aa11.32□□□□□ -0.6
SPARC-208ENST00000538026 C5P01031 1676 aa11.32□□□□□ -0.6
SPARC-208ENST00000538026 LOC102724428A0A0B4J2F2 783 aa11.31□□□□□ -0.6
SPARC-208ENST00000538026 SIK1P57059 783 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms