RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 SPRYD3Q8NCJ5 442 aa22.32■■□□□ 1.16
RAB40C-203ENST00000535977 SLIT1O75093 1534 aa22.31■■□□□ 1.16
RAB40C-203ENST00000535977 C8orf58Q8NAV2 365 aa22.31■■□□□ 1.16
RAB40C-203ENST00000535977 TRIM44Q96DX7 344 aaPredicted RBP22.31■■□□□ 1.16
RAB40C-203ENST00000535977 NALCNQ8IZF0 1738 aa22.31■■□□□ 1.16
RAB40C-203ENST00000535977 SULT6B1Q6IMI4 303 aa22.3■■□□□ 1.16
RAB40C-203ENST00000535977 KIAA1211Q6ZU35 1233 aa22.3■■□□□ 1.16
RAB40C-203ENST00000535977 SSH2Q76I76 1423 aa22.3■■□□□ 1.16
RAB40C-203ENST00000535977 KIAA0232Q92628 1395 aa22.3■■□□□ 1.16
RAB40C-203ENST00000535977 BMP2KLQ5H9B9 411 aa22.3■■□□□ 1.16
RAB40C-203ENST00000535977 ARHGAP23Q9P227 1491 aa22.29■■□□□ 1.16
RAB40C-203ENST00000535977 CHL1O00533 1208 aa22.29■■□□□ 1.16
RAB40C-203ENST00000535977 ELL2O00472 640 aaPredicted RBP22.28■■□□□ 1.16
RAB40C-203ENST00000535977 MFAP1P55081 439 aaKnown RBP22.27■■□□□ 1.16
RAB40C-203ENST00000535977 PTPRUQ92729 1446 aa22.27■■□□□ 1.16
RAB40C-203ENST00000535977 LNPKQ9C0E8 428 aa22.27■■□□□ 1.16
RAB40C-203ENST00000535977 FAM83GA6ND36 823 aa22.27■■□□□ 1.16
RAB40C-203ENST00000535977 ARHGEF10O15013 1369 aa22.27■■□□□ 1.15
RAB40C-203ENST00000535977 DIP2AQ14689 1571 aa22.26■■□□□ 1.15
RAB40C-203ENST00000535977 AMOTL2Q9Y2J4 779 aa22.26■■□□□ 1.15
RAB40C-203ENST00000535977 ANKRD45Q5TZF3 282 aa22.26■■□□□ 1.15
RAB40C-203ENST00000535977 INTS3Q68E01 1043 aaKnown RBP22.25■■□□□ 1.15
RAB40C-203ENST00000535977 RGPD1P0DJD0 1748 aa22.25■■□□□ 1.15
RAB40C-203ENST00000535977 THEMISQ8N1K5 641 aaPredicted RBP22.25■■□□□ 1.15
RAB40C-203ENST00000535977 RBM25P49756 843 aaKnown RBP22.24■■□□□ 1.15
RAB40C-203ENST00000535977 AEBP1Q8IUX7 1158 aa22.23■■□□□ 1.15
RAB40C-203ENST00000535977 SLC26A8Q96RN1 970 aa22.23■■□□□ 1.15
RAB40C-203ENST00000535977 PTPRCP08575 1304 aa22.23■■□□□ 1.15
RAB40C-203ENST00000535977 FER1L4A9Z1Z3 1794 aa22.23■■□□□ 1.15
RAB40C-203ENST00000535977 RIMS1Q86UR5 1692 aaKnown RBP22.23■■□□□ 1.15
RAB40C-203ENST00000535977 DCTN1Q14203 1278 aa22.23■■□□□ 1.15
RAB40C-203ENST00000535977 SBNO1A3KN83 1393 aa22.22■■□□□ 1.15
RAB40C-203ENST00000535977 HSP90AB2PQ58FF8 381 aa22.22■■□□□ 1.15
RAB40C-203ENST00000535977 ISY1Q9ULR0 285 aaKnown RBP22.22■■□□□ 1.15
RAB40C-203ENST00000535977 CHMP5Q9NZZ3 219 aa22.21■■□□□ 1.15
RAB40C-203ENST00000535977 FLT4P35916 1363 aa22.21■■□□□ 1.15
RAB40C-203ENST00000535977 ADAMTSL3P82987 1691 aa22.21■■□□□ 1.15
RAB40C-203ENST00000535977 PEAK1Q9H792 1746 aa22.21■■□□□ 1.15
RAB40C-203ENST00000535977 SIRT2Q8IXJ6 389 aa22.2■■□□□ 1.14
RAB40C-203ENST00000535977 ANKARQ7Z5J8 1434 aa22.19■■□□□ 1.14
RAB40C-203ENST00000535977 HSCBQ8IWL3 235 aa22.19■■□□□ 1.14
RAB40C-203ENST00000535977 RPAP2Q8IXW5 612 aaPredicted RBP22.19■■□□□ 1.14
RAB40C-203ENST00000535977 NGDNQ8NEJ9 315 aaKnown RBP22.19■■□□□ 1.14
RAB40C-203ENST00000535977 NUTM2FA1L443 756 aa22.18■■□□□ 1.14
RAB40C-203ENST00000535977 GAS2L3Q86XJ1 694 aa22.18■■□□□ 1.14
RAB40C-203ENST00000535977 SNX21Q969T3 373 aa22.18■■□□□ 1.14
RAB40C-203ENST00000535977 MAP3K19Q56UN5 1328 aa22.18■■□□□ 1.14
RAB40C-203ENST00000535977 RTF1Q92541 710 aaKnown RBP22.18■■□□□ 1.14
RAB40C-203ENST00000535977 DCTPP1Q9H773 170 aa22.18■■□□□ 1.14
RAB40C-203ENST00000535977 C1orf115Q9H7X2 142 aa22.18■■□□□ 1.14
RAB40C-203ENST00000535977 CRB1P82279 1406 aa22.18■■□□□ 1.14
RAB40C-203ENST00000535977 KDRP35968 1356 aa22.17■■□□□ 1.14
RAB40C-203ENST00000535977 HTATSF1O43719 755 aaKnown RBP22.17■■□□□ 1.14
RAB40C-203ENST00000535977 FGD1P98174 961 aa22.17■■□□□ 1.14
RAB40C-203ENST00000535977 MCM10Q7L590 875 aa22.16■■□□□ 1.14
RAB40C-203ENST00000535977 GAS2L2Q8NHY3 880 aa22.16■■□□□ 1.14
RAB40C-203ENST00000535977 DDX11L8A8MPP1 907 aa22.16■■□□□ 1.14
RAB40C-203ENST00000535977 ANKRD44Q8N8A2 993 aa22.15■■□□□ 1.14
RAB40C-203ENST00000535977 FMN2Q9NZ56 1722 aa22.15■■□□□ 1.14
RAB40C-203ENST00000535977 OFD1O75665 1012 aa22.15■■□□□ 1.14
RAB40C-203ENST00000535977 AMPHP49418 695 aa22.15■■□□□ 1.14
RAB40C-203ENST00000535977 IGSF1Q8N6C5 1336 aa22.14■■□□□ 1.13
RAB40C-203ENST00000535977 FAM13BQ9NYF5 915 aa22.14■■□□□ 1.13
RAB40C-203ENST00000535977 RGS12O14924 1447 aa22.13■■□□□ 1.13
RAB40C-203ENST00000535977 XRN1Q8IZH2 1706 aaKnown RBP22.12■■□□□ 1.13
RAB40C-203ENST00000535977 SOS1Q07889 1333 aaPredicted RBP22.11■■□□□ 1.13
RAB40C-203ENST00000535977 CDC45O75419 566 aa22.11■■□□□ 1.13
RAB40C-203ENST00000535977 MTHFSDQ2M296 383 aaKnown RBP22.11■■□□□ 1.13
RAB40C-203ENST00000535977 MAP7D2Q96T17 732 aa22.11■■□□□ 1.13
RAB40C-203ENST00000535977 ZSCAN30Q86W11 494 aa22.1■■□□□ 1.13
RAB40C-203ENST00000535977 TSPYL4Q9UJ04 414 aa22.1■■□□□ 1.13
RAB40C-203ENST00000535977 TBC1D9Q6ZT07 1266 aa22.09■■□□□ 1.13
RAB40C-203ENST00000535977 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.09■■□□□ 1.13
RAB40C-203ENST00000535977 EYA1Q99502 592 aa22.09■■□□□ 1.13
RAB40C-203ENST00000535977 SLC4A2P04920 1241 aa22.08■■□□□ 1.13
RAB40C-203ENST00000535977 BABAM1Q9NWV8 329 aa22.08■■□□□ 1.13
RAB40C-203ENST00000535977 CCT4P50991 539 aaKnown RBP22.08■■□□□ 1.13
RAB40C-203ENST00000535977 TERF1P54274 439 aa22.08■■□□□ 1.13
RAB40C-203ENST00000535977 PLEKHM2Q8IWE5 1019 aa22.08■■□□□ 1.13
RAB40C-203ENST00000535977 SOX12O15370 315 aa22.08■■□□□ 1.12
RAB40C-203ENST00000535977 HMMRO75330 724 aa22.08■■□□□ 1.12
RAB40C-203ENST00000535977 NLRP6P59044 892 aa22.08■■□□□ 1.12
RAB40C-203ENST00000535977 KRT24Q2M2I5 525 aa22.08■■□□□ 1.12
RAB40C-203ENST00000535977 CEP85Q6P2H3 762 aa22.08■■□□□ 1.12
RAB40C-203ENST00000535977 SMAP1Q8IYB5 467 aaPredicted RBP22.08■■□□□ 1.12
RAB40C-203ENST00000535977 USP54Q70EL1 1684 aa22.07■■□□□ 1.12
RAB40C-203ENST00000535977 PIK3C2AO00443 1686 aa22.07■■□□□ 1.12
RAB40C-203ENST00000535977 ATP10DQ9P241 1426 aa22.07■■□□□ 1.12
RAB40C-203ENST00000535977 NCOA3Q9Y6Q9 1424 aa22.07■■□□□ 1.12
RAB40C-203ENST00000535977 CIZ1Q9ULV3 898 aaPredicted RBP22.07■■□□□ 1.12
RAB40C-203ENST00000535977 RTL1A6NKG5 1358 aa22.07■■□□□ 1.12
RAB40C-203ENST00000535977 CCDC173Q0VFZ6 552 aa22.07■■□□□ 1.12
RAB40C-203ENST00000535977 RGPD8O14715 1765 aaPredicted RBP22.06■■□□□ 1.12
RAB40C-203ENST00000535977 PPP1R9BQ96SB3 815 aa22.05■■□□□ 1.12
RAB40C-203ENST00000535977 R3HCC1Q9Y3T6 440 aaKnown RBP22.05■■□□□ 1.12
RAB40C-203ENST00000535977 TTC22Q5TAA0 569 aa22.05■■□□□ 1.12
RAB40C-203ENST00000535977 STK31Q9BXU1 1019 aa22.04■■□□□ 1.12
RAB40C-203ENST00000535977 MSH6P52701 1360 aa22.04■■□□□ 1.12
RAB40C-203ENST00000535977 MSNP26038 577 aaKnown RBP22.04■■□□□ 1.12
RAB40C-203ENST00000535977 GNAT3A8MTJ3 354 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms