RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SDF4Q9BRK5 362 aa14.64□□□□□ -0.07
BDNF-218ENST00000533246 CERS3Q8IU89 383 aa14.64□□□□□ -0.07
BDNF-218ENST00000533246 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.64□□□□□ -0.07
BDNF-218ENST00000533246 C16orf71Q8IYS4 520 aaPredicted RBP14.63□□□□□ -0.07
BDNF-218ENST00000533246 JARID2Q92833 1246 aaPredicted RBP14.63□□□□□ -0.07
BDNF-218ENST00000533246 PRDM11Q9NQV5 511 aa14.63□□□□□ -0.07
BDNF-218ENST00000533246 RALGAPBQ86X10 1494 aa14.63□□□□□ -0.07
BDNF-218ENST00000533246 CABP4P57796 275 aa14.63□□□□□ -0.07
BDNF-218ENST00000533246 ALDH1L2Q3SY69 923 aa14.63□□□□□ -0.07
BDNF-218ENST00000533246 GRPEL1Q9HAV7 217 aa14.63□□□□□ -0.07
BDNF-218ENST00000533246 SYCP2Q9BX26 1530 aa14.63□□□□□ -0.07
BDNF-218ENST00000533246 CCDC66A2RUB6 948 aa14.63□□□□□ -0.07
BDNF-218ENST00000533246 SSFA2P28290 1259 aa14.63□□□□□ -0.07
BDNF-218ENST00000533246 SASS6Q6UVJ0 657 aa14.63□□□□□ -0.07
BDNF-218ENST00000533246 TBC1D9Q6ZT07 1266 aa14.63□□□□□ -0.07
BDNF-218ENST00000533246 MEIS3Q99687 375 aa14.63□□□□□ -0.07
BDNF-218ENST00000533246 ACEP12821 1306 aa14.63□□□□□ -0.07
BDNF-218ENST00000533246 SMAP1Q8IYB5 467 aaPredicted RBP14.63□□□□□ -0.07
BDNF-218ENST00000533246 CHMP4CQ96CF2 233 aa14.63□□□□□ -0.07
BDNF-218ENST00000533246 JAKMIP1Q96N16 626 aaKnown RBP14.63□□□□□ -0.07
BDNF-218ENST00000533246 POLKQ9UBT6 870 aa14.63□□□□□ -0.07
BDNF-218ENST00000533246 LRRFIP1Q32MZ4 808 aaKnown RBP14.62□□□□□ -0.07
BDNF-218ENST00000533246 PZPP20742 1482 aa14.62□□□□□ -0.07
BDNF-218ENST00000533246 FKBP4Q02790 459 aaKnown RBP eCLIP14.62□□□□□ -0.07
BDNF-218ENST00000533246 TRIM29Q14134 588 aa14.62□□□□□ -0.07
BDNF-218ENST00000533246 C8orf34Q49A92 452 aa14.62□□□□□ -0.07
BDNF-218ENST00000533246 CCDC34Q96HJ3 373 aa14.62□□□□□ -0.07
BDNF-218ENST00000533246 BOLA2Q9H3K6 86 aa14.62□□□□□ -0.07
BDNF-218ENST00000533246 TRERF1Q96PN7 1200 aa14.62□□□□□ -0.07
BDNF-218ENST00000533246 GDPD2Q9HCC8 539 aa14.62□□□□□ -0.07
BDNF-218ENST00000533246 PLCH2O75038 1416 aa14.61□□□□□ -0.07
BDNF-218ENST00000533246 MX1P20591 662 aa14.61□□□□□ -0.07
BDNF-218ENST00000533246 CCDC73Q6ZRK6 1079 aa14.61□□□□□ -0.07
BDNF-218ENST00000533246 SPC24Q8NBT2 197 aa14.61□□□□□ -0.07
BDNF-218ENST00000533246 CCDC8Q9H0W5 538 aaPredicted RBP14.61□□□□□ -0.07
BDNF-218ENST00000533246 FLIIQ13045 1269 aa14.61□□□□□ -0.07
BDNF-218ENST00000533246 RRP12Q5JTH9 1297 aaKnown RBP14.61□□□□□ -0.07
BDNF-218ENST00000533246 CYP46A1Q9Y6A2 500 aa14.61□□□□□ -0.07
BDNF-218ENST00000533246 MARCH6O60337 910 aa14.61□□□□□ -0.07
BDNF-218ENST00000533246 KDM5BQ9UGL1 1544 aa14.6□□□□□ -0.07
BDNF-218ENST00000533246 PPFIA3O75145 1194 aa14.6□□□□□ -0.07
BDNF-218ENST00000533246 PSMA5P28066 241 aa14.6□□□□□ -0.07
BDNF-218ENST00000533246 TPD52L1Q16890 204 aaPredicted RBP14.6□□□□□ -0.07
BDNF-218ENST00000533246 VPS53Q5VIR6 699 aa14.6□□□□□ -0.07
BDNF-218ENST00000533246 CNPY4Q8N129 248 aa14.6□□□□□ -0.07
BDNF-218ENST00000533246 RAPGEF6Q8TEU7 1601 aa14.59□□□□□ -0.07
BDNF-218ENST00000533246 MCM2P49736 904 aa14.59□□□□□ -0.07
BDNF-218ENST00000533246 LARP1BQ659C4 914 aaKnown RBP14.59□□□□□ -0.07
BDNF-218ENST00000533246 DDX11Q96FC9 970 aa14.59□□□□□ -0.07
BDNF-218ENST00000533246 TBC1D32Q96NH3 1257 aa14.59□□□□□ -0.07
BDNF-218ENST00000533246 SPG7Q9UQ90 795 aa14.59□□□□□ -0.07
BDNF-218ENST00000533246 IGSF3O75054 1194 aa14.59□□□□□ -0.07
BDNF-218ENST00000533246 MBD3O95983 291 aa14.59□□□□□ -0.07
BDNF-218ENST00000533246 FAM193AP78312 1265 aa14.59□□□□□ -0.07
BDNF-218ENST00000533246 TNPO1Q92973 898 aaKnown RBP14.59□□□□□ -0.07
BDNF-218ENST00000533246 PHF8Q9UPP1 1060 aa14.59□□□□□ -0.07
BDNF-218ENST00000533246 FAM135AQ9P2D6 1515 aa14.58□□□□□ -0.07
BDNF-218ENST00000533246 PI4KAP2A4QPH2 592 aa14.58□□□□□ -0.08
BDNF-218ENST00000533246 PI4KAP1Q8N8J0 262 aa14.58□□□□□ -0.08
BDNF-218ENST00000533246 SECISBP2LQ93073 1101 aaKnown RBP14.58□□□□□ -0.08
BDNF-218ENST00000533246 TRIM5Q9C035 493 aa14.58□□□□□ -0.08
BDNF-218ENST00000533246 ABCC11Q96J66 1382 aa14.58□□□□□ -0.08
BDNF-218ENST00000533246 DHX16O60231 1041 aaKnown RBP14.58□□□□□ -0.08
BDNF-218ENST00000533246 TCOF1Q13428 1488 aaKnown RBP14.58□□□□□ -0.08
BDNF-218ENST00000533246 SYCE3A1L190 88 aa14.57□□□□□ -0.08
BDNF-218ENST00000533246 CASTP20810 708 aaKnown RBP14.57□□□□□ -0.08
BDNF-218ENST00000533246 PRPF40BQ6NWY9 871 aaKnown RBP14.57□□□□□ -0.08
BDNF-218ENST00000533246 BLOC1S2Q6QNY1 142 aa14.57□□□□□ -0.08
BDNF-218ENST00000533246 TMX4Q9H1E5 349 aaPredicted RBP14.57□□□□□ -0.08
BDNF-218ENST00000533246 CNNM1Q9NRU3 951 aa14.57□□□□□ -0.08
BDNF-218ENST00000533246 CCDC83Q8IWF9 413 aa14.57□□□□□ -0.08
BDNF-218ENST00000533246 CWC22Q9HCG8 908 aaKnown RBP14.57□□□□□ -0.08
BDNF-218ENST00000533246 HOMER1Q86YM7 354 aa14.56□□□□□ -0.08
BDNF-218ENST00000533246 ERC1Q8IUD2 1116 aa14.56□□□□□ -0.08
BDNF-218ENST00000533246 PIP4K2AP48426 406 aaPredicted RBP14.55□□□□□ -0.08
BDNF-218ENST00000533246 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
BDNF-218ENST00000533246 KIF1BPQ96EK5 621 aa14.55□□□□□ -0.08
BDNF-218ENST00000533246 TSPY26PQ9H489 355 aa14.55□□□□□ -0.08
BDNF-218ENST00000533246 PDRG1Q9NUG6 133 aa14.55□□□□□ -0.08
BDNF-218ENST00000533246 CHRNA2Q15822 529 aa14.55□□□□□ -0.08
BDNF-218ENST00000533246 BMP2KLQ5H9B9 411 aa14.55□□□□□ -0.08
BDNF-218ENST00000533246 ATP5J2-PTCD1G3V325 749 aa14.55□□□□□ -0.08
BDNF-218ENST00000533246 PANK2Q9BZ23 570 aa14.55□□□□□ -0.08
BDNF-218ENST00000533246 NUTM2BA6NNL0 878 aaPredicted RBP14.54□□□□□ -0.08
BDNF-218ENST00000533246 NUTM2EB1AL46 878 aaPredicted RBP14.54□□□□□ -0.08
BDNF-218ENST00000533246 VAMP4O75379 141 aa14.54□□□□□ -0.08
BDNF-218ENST00000533246 NUTM2AQ8IVF1 878 aaPredicted RBP14.54□□□□□ -0.08
BDNF-218ENST00000533246 DNAAF4Q8WXU2 420 aa14.54□□□□□ -0.08
BDNF-218ENST00000533246 MYD88Q99836 296 aa14.54□□□□□ -0.08
BDNF-218ENST00000533246 DENND4BO75064 1496 aaPredicted RBP14.54□□□□□ -0.08
BDNF-218ENST00000533246 PDCP20941 246 aa14.54□□□□□ -0.08
BDNF-218ENST00000533246 EIF4A2Q14240 407 aaKnown RBP14.54□□□□□ -0.08
BDNF-218ENST00000533246 PPP1R42Q7Z4L9 355 aa14.54□□□□□ -0.08
BDNF-218ENST00000533246 KAT6BQ8WYB5 2073 aa14.54□□□□□ -0.08
BDNF-218ENST00000533246 WDR33Q9C0J8 1336 aaKnown RBP14.54□□□□□ -0.08
BDNF-218ENST00000533246 ASXL2Q76L83 1435 aa14.54□□□□□ -0.08
BDNF-218ENST00000533246 CIZ1Q9ULV3 898 aaPredicted RBP14.54□□□□□ -0.08
BDNF-218ENST00000533246 DISP1Q96F81 1524 aa14.53□□□□□ -0.08
BDNF-218ENST00000533246 ERICH2A1L162 156 aa14.53□□□□□ -0.08
BDNF-218ENST00000533246 CLGNO14967 610 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms