RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 C22orf23Q9BZE7 217 aa12.75□□□□□ -0.37
COLCA1-203ENST00000532918 CHMP5Q9NZZ3 219 aa12.75□□□□□ -0.37
COLCA1-203ENST00000532918 CDKL5O76039 1030 aa12.75□□□□□ -0.37
COLCA1-203ENST00000532918 NBPF8Q3BBV2 869 aa12.75□□□□□ -0.37
COLCA1-203ENST00000532918 NBPF14Q5TI25 921 aa12.75□□□□□ -0.37
COLCA1-203ENST00000532918 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.75□□□□□ -0.37
COLCA1-203ENST00000532918 CRACR2BQ8N4Y2 399 aaPredicted RBP12.75□□□□□ -0.37
COLCA1-203ENST00000532918 SMARCC1Q92922 1105 aaPredicted RBP12.75□□□□□ -0.37
COLCA1-203ENST00000532918 ABCC5O15440 1437 aa12.75□□□□□ -0.37
COLCA1-203ENST00000532918 TTLL12Q14166 644 aaPredicted RBP12.75□□□□□ -0.37
COLCA1-203ENST00000532918 PAXIP1Q6ZW49 1069 aaPredicted RBP12.75□□□□□ -0.37
COLCA1-203ENST00000532918 RFC4P35249 363 aa12.74□□□□□ -0.37
COLCA1-203ENST00000532918 ST5P78524 1137 aa12.74□□□□□ -0.37
COLCA1-203ENST00000532918 HYPKQ9NX55 129 aa12.74□□□□□ -0.37
COLCA1-203ENST00000532918 TRMT112Q9UI30 125 aaKnown RBP12.74□□□□□ -0.37
COLCA1-203ENST00000532918 NOL7Q9UMY1 257 aaKnown RBP12.74□□□□□ -0.37
COLCA1-203ENST00000532918 PCF11O94913 1555 aaKnown RBP12.74□□□□□ -0.37
COLCA1-203ENST00000532918 ATF7IPQ6VMQ6 1270 aa12.74□□□□□ -0.37
COLCA1-203ENST00000532918 PPP1R42Q7Z4L9 355 aa12.74□□□□□ -0.37
COLCA1-203ENST00000532918 RPAP2Q8IXW5 612 aaPredicted RBP12.73□□□□□ -0.37
COLCA1-203ENST00000532918 NSD2O96028 1365 aa12.73□□□□□ -0.37
COLCA1-203ENST00000532918 ABCC11Q96J66 1382 aa12.73□□□□□ -0.37
COLCA1-203ENST00000532918 PTPN23Q9H3S7 1636 aa12.73□□□□□ -0.37
COLCA1-203ENST00000532918 IFIT5Q13325 482 aaKnown RBP12.73□□□□□ -0.37
COLCA1-203ENST00000532918 NME9Q86XW9 330 aa12.73□□□□□ -0.37
COLCA1-203ENST00000532918 AIDAQ96BJ3 306 aa12.73□□□□□ -0.37
COLCA1-203ENST00000532918 IFT57Q9NWB7 429 aa12.73□□□□□ -0.37
COLCA1-203ENST00000532918 PLCH2O75038 1416 aa12.73□□□□□ -0.37
COLCA1-203ENST00000532918 ZNF518AQ6AHZ1 1483 aa12.73□□□□□ -0.37
COLCA1-203ENST00000532918 SLC5A1P13866 664 aa12.73□□□□□ -0.37
COLCA1-203ENST00000532918 TTC21AQ8NDW8 1320 aa12.73□□□□□ -0.37
COLCA1-203ENST00000532918 CYP46A1Q9Y6A2 500 aa12.73□□□□□ -0.37
COLCA1-203ENST00000532918 KDM5BQ9UGL1 1544 aa12.72□□□□□ -0.37
COLCA1-203ENST00000532918 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.72□□□□□ -0.37
COLCA1-203ENST00000532918 USP5P45974 858 aa12.72□□□□□ -0.37
COLCA1-203ENST00000532918 DUSP27Q5VZP5 1158 aa12.72□□□□□ -0.37
COLCA1-203ENST00000532918 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
COLCA1-203ENST00000532918 CDC5LQ99459 802 aaKnown RBP12.72□□□□□ -0.37
COLCA1-203ENST00000532918 SDF4Q9BRK5 362 aa12.72□□□□□ -0.37
COLCA1-203ENST00000532918 C14orf93Q9H972 538 aaKnown RBP12.72□□□□□ -0.37
COLCA1-203ENST00000532918 ANKRD18BA2A2Z9 1011 aa12.72□□□□□ -0.37
COLCA1-203ENST00000532918 KRT32Q14532 448 aa12.72□□□□□ -0.37
COLCA1-203ENST00000532918 WDR7Q9Y4E6 1490 aa12.72□□□□□ -0.37
COLCA1-203ENST00000532918 TNIP1Q15025 636 aa12.72□□□□□ -0.37
COLCA1-203ENST00000532918 DZIP1Q86YF9 867 aaKnown RBP12.72□□□□□ -0.37
COLCA1-203ENST00000532918 POLR3DP05423 398 aaPredicted RBP12.71□□□□□ -0.37
COLCA1-203ENST00000532918 POLD1P28340 1107 aa12.71□□□□□ -0.37
COLCA1-203ENST00000532918 DDX46Q7L014 1031 aaKnown RBP12.71□□□□□ -0.37
COLCA1-203ENST00000532918 PAF1Q8N7H5 531 aa12.71□□□□□ -0.37
COLCA1-203ENST00000532918 FAM13BQ9NYF5 915 aa12.71□□□□□ -0.37
COLCA1-203ENST00000532918 ABCF2Q9UG63 623 aa12.71□□□□□ -0.37
COLCA1-203ENST00000532918 PEG3Q9GZU2 1588 aa12.71□□□□□ -0.37
COLCA1-203ENST00000532918 NOS1P29475 1434 aa12.71□□□□□ -0.37
COLCA1-203ENST00000532918 ZNF76P36508 570 aa12.71□□□□□ -0.37
COLCA1-203ENST00000532918 SYCP1Q15431 976 aa12.71□□□□□ -0.37
COLCA1-203ENST00000532918 WASF1Q92558 559 aa12.71□□□□□ -0.37
COLCA1-203ENST00000532918 MAGEC2Q9UBF1 373 aaPredicted RBP12.71□□□□□ -0.37
COLCA1-203ENST00000532918 NAIPQ13075 1403 aa12.71□□□□□ -0.37
COLCA1-203ENST00000532918 IDH1O75874 414 aaKnown RBP12.71□□□□□ -0.37
COLCA1-203ENST00000532918 ANKRD24Q8TF21 1146 aa12.71□□□□□ -0.38
COLCA1-203ENST00000532918 RAB11FIP3O75154 756 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 ATP2B1P20020 1258 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 NAP1L1P55209 391 aaKnown RBP12.7□□□□□ -0.38
COLCA1-203ENST00000532918 NUP133Q8WUM0 1156 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 MYD88Q99836 296 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 TRIM21P19474 475 aaKnown RBP12.7□□□□□ -0.38
COLCA1-203ENST00000532918 MAP3K1Q13233 1512 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 RABEP1Q15276 862 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 DNAI2Q9GZS0 605 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 TSHZ2Q9NRE2 1034 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 DBF4Q9UBU7 674 aaPredicted RBP12.7□□□□□ -0.38
COLCA1-203ENST00000532918 LDHCP07864 332 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 LRRC59Q96AG4 307 aaKnown RBP12.7□□□□□ -0.38
COLCA1-203ENST00000532918 ADGRF5Q8IZF2 1346 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 ZFYVE27Q5T4F4 411 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 USHBP1Q8N6Y0 703 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 C8orf37Q96NL8 207 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 C1orf115Q9H7X2 142 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 BMP2KQ9NSY1 1161 aaPredicted RBP12.7□□□□□ -0.38
COLCA1-203ENST00000532918 A2MP01023 1474 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 CCDC173Q0VFZ6 552 aa12.7□□□□□ -0.38
COLCA1-203ENST00000532918 CCAR2Q8N163 923 aaKnown RBP12.7□□□□□ -0.38
COLCA1-203ENST00000532918 LMTK3Q96Q04 1460 aa12.69□□□□□ -0.38
COLCA1-203ENST00000532918 C19orf44Q9H6X5 657 aa12.69□□□□□ -0.38
COLCA1-203ENST00000532918 MAP3K12Q12852 859 aa12.69□□□□□ -0.38
COLCA1-203ENST00000532918 STK38Q15208 465 aa12.69□□□□□ -0.38
COLCA1-203ENST00000532918 IMMTQ16891 758 aaKnown RBP12.69□□□□□ -0.38
COLCA1-203ENST00000532918 C6orf229H3BNL8 230 aa12.69□□□□□ -0.38
COLCA1-203ENST00000532918 MYO1BO43795 1136 aa12.69□□□□□ -0.38
COLCA1-203ENST00000532918 STIM1Q13586 685 aa12.69□□□□□ -0.38
COLCA1-203ENST00000532918 FILIP1LQ4L180 1135 aa12.69□□□□□ -0.38
COLCA1-203ENST00000532918 CCDC85AQ96PX6 553 aaPredicted RBP12.69□□□□□ -0.38
COLCA1-203ENST00000532918 ACEP12821 1306 aa12.68□□□□□ -0.38
COLCA1-203ENST00000532918 AEBP1Q8IUX7 1158 aa12.68□□□□□ -0.38
COLCA1-203ENST00000532918 SCAF11Q99590 1463 aaKnown RBP12.68□□□□□ -0.38
COLCA1-203ENST00000532918 KINO60870 393 aaKnown RBP12.68□□□□□ -0.38
COLCA1-203ENST00000532918 LETM1O95202 739 aaPredicted RBP12.68□□□□□ -0.38
COLCA1-203ENST00000532918 ZNF622Q969S3 477 aaKnown RBP eCLIP12.68□□□□□ -0.38
COLCA1-203ENST00000532918 GSE1Q14687 1217 aa12.68□□□□□ -0.38
COLCA1-203ENST00000532918 MVPQ14764 893 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms