RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 PLEKHG5O94827 1062 aa18.54■□□□□ 0.56
SSH3-210ENST00000532881 RBM33Q96EV2 1170 aaKnown RBP18.54■□□□□ 0.56
SSH3-210ENST00000532881 DDIT3P35638 169 aa18.53■□□□□ 0.56
SSH3-210ENST00000532881 CEP85Q6P2H3 762 aa18.53■□□□□ 0.56
SSH3-210ENST00000532881 GAS2L2Q8NHY3 880 aa18.53■□□□□ 0.56
SSH3-210ENST00000532881 PEAK1Q9H792 1746 aa18.53■□□□□ 0.56
SSH3-210ENST00000532881 HDGFP51858 240 aaKnown RBP18.53■□□□□ 0.56
SSH3-210ENST00000532881 INTS3Q68E01 1043 aaKnown RBP18.53■□□□□ 0.56
SSH3-210ENST00000532881 LTV1Q96GA3 475 aaPredicted RBP18.53■□□□□ 0.56
SSH3-210ENST00000532881 AMOTL2Q9Y2J4 779 aa18.53■□□□□ 0.56
SSH3-210ENST00000532881 PTPRUQ92729 1446 aa18.53■□□□□ 0.56
SSH3-210ENST00000532881 REREQ9P2R6 1566 aa18.52■□□□□ 0.56
SSH3-210ENST00000532881 ITSN1Q15811 1721 aa18.52■□□□□ 0.56
SSH3-210ENST00000532881 TSPYL4Q9UJ04 414 aa18.51■□□□□ 0.55
SSH3-210ENST00000532881 AKAP12Q02952 1782 aa18.51■□□□□ 0.55
SSH3-210ENST00000532881 TECPR2O15040 1411 aa18.51■□□□□ 0.55
SSH3-210ENST00000532881 CDC45O75419 566 aa18.51■□□□□ 0.55
SSH3-210ENST00000532881 ANKRD44Q8N8A2 993 aa18.51■□□□□ 0.55
SSH3-210ENST00000532881 NGDNQ8NEJ9 315 aaKnown RBP18.51■□□□□ 0.55
SSH3-210ENST00000532881 USP6P35125 1406 aa18.51■□□□□ 0.55
SSH3-210ENST00000532881 ATP10DQ9P241 1426 aa18.51■□□□□ 0.55
SSH3-210ENST00000532881 SNX21Q969T3 373 aa18.5■□□□□ 0.55
SSH3-210ENST00000532881 OVOS2A0A0J9YW53 1432 aa18.5■□□□□ 0.55
SSH3-210ENST00000532881 OVOS2Q6IE36 1432 aa18.5■□□□□ 0.55
SSH3-210ENST00000532881 TTC22Q5TAA0 569 aa18.5■□□□□ 0.55
SSH3-210ENST00000532881 EYA1Q99502 592 aa18.5■□□□□ 0.55
SSH3-210ENST00000532881 CHMP4BQ9H444 224 aaKnown RBP18.5■□□□□ 0.55
SSH3-210ENST00000532881 GOLGA6L3A6NEY3 463 aa18.49■□□□□ 0.55
SSH3-210ENST00000532881 RTL1A6NKG5 1358 aa18.49■□□□□ 0.55
SSH3-210ENST00000532881 PLEKHG3A1L390 1219 aa18.49■□□□□ 0.55
SSH3-210ENST00000532881 SDSP20132 328 aa18.49■□□□□ 0.55
SSH3-210ENST00000532881 SSFA2P28290 1259 aa18.49■□□□□ 0.55
SSH3-210ENST00000532881 AMPHP49418 695 aa18.49■□□□□ 0.55
SSH3-210ENST00000532881 SIRT1Q96EB6 747 aa18.49■□□□□ 0.55
SSH3-210ENST00000532881 RRAGDQ9NQL2 400 aaPredicted RBP18.48■□□□□ 0.55
SSH3-210ENST00000532881 NCOA3Q9Y6Q9 1424 aa18.48■□□□□ 0.55
SSH3-210ENST00000532881 K7ELQ4 463 aaPredicted RBP18.48■□□□□ 0.55
SSH3-210ENST00000532881 USHBP1Q8N6Y0 703 aa18.48■□□□□ 0.55
SSH3-210ENST00000532881 EXOC6BQ9Y2D4 811 aa18.48■□□□□ 0.55
SSH3-210ENST00000532881 CRB1P82279 1406 aa18.48■□□□□ 0.55
SSH3-210ENST00000532881 AK9Q5TCS8 1911 aa18.47■□□□□ 0.55
SSH3-210ENST00000532881 RTF1Q92541 710 aaKnown RBP18.47■□□□□ 0.55
SSH3-210ENST00000532881 UBR1Q8IWV7 1749 aa18.46■□□□□ 0.55
SSH3-210ENST00000532881 NLRP6P59044 892 aa18.46■□□□□ 0.55
SSH3-210ENST00000532881 PKP1Q13835 747 aa18.46■□□□□ 0.55
SSH3-210ENST00000532881 CHAMP1Q96JM3 812 aa18.46■□□□□ 0.55
SSH3-210ENST00000532881 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
SSH3-210ENST00000532881 FSD2A1L4K1 749 aa18.45■□□□□ 0.54
SSH3-210ENST00000532881 RAB3GAP1Q15042 981 aa18.44■□□□□ 0.54
SSH3-210ENST00000532881 GAS2L3Q86XJ1 694 aa18.44■□□□□ 0.54
SSH3-210ENST00000532881 CEP170BQ9Y4F5 1589 aaPredicted RBP18.44■□□□□ 0.54
SSH3-210ENST00000532881 USP26Q9BXU7 913 aa18.44■□□□□ 0.54
SSH3-210ENST00000532881 RPAP2Q8IXW5 612 aaPredicted RBP18.43■□□□□ 0.54
SSH3-210ENST00000532881 RGPD8O14715 1765 aaPredicted RBP18.43■□□□□ 0.54
SSH3-210ENST00000532881 ZBTB7CA1YPR0 619 aa18.43■□□□□ 0.54
SSH3-210ENST00000532881 L1TD1Q5T7N2 865 aaKnown RBP18.43■□□□□ 0.54
SSH3-210ENST00000532881 NRKQ7Z2Y5 1582 aa18.43■□□□□ 0.54
SSH3-210ENST00000532881 PNMA6EA0A0J9YXQ4 647 aa18.41■□□□□ 0.54
SSH3-210ENST00000532881 KIF13AQ9H1H9 1805 aa18.41■□□□□ 0.54
SSH3-210ENST00000532881 FKBP5Q13451 457 aaPredicted RBP18.41■□□□□ 0.54
SSH3-210ENST00000532881 EID1Q9Y6B2 187 aa18.41■□□□□ 0.54
SSH3-210ENST00000532881 USP31Q70CQ4 1352 aa18.41■□□□□ 0.54
SSH3-210ENST00000532881 ZGPATQ8N5A5 531 aaKnown RBP18.4■□□□□ 0.54
SSH3-210ENST00000532881 KIAA0232Q92628 1395 aa18.4■□□□□ 0.54
SSH3-210ENST00000532881 PLEKHG1Q9ULL1 1385 aa18.4■□□□□ 0.54
SSH3-210ENST00000532881 PTPRCP08575 1304 aa18.4■□□□□ 0.54
SSH3-210ENST00000532881 DDX11L8A8MPP1 907 aa18.4■□□□□ 0.54
SSH3-210ENST00000532881 SSH2Q76I76 1423 aa18.4■□□□□ 0.54
SSH3-210ENST00000532881 FOXD4L5Q5VV16 416 aaPredicted RBP18.39■□□□□ 0.54
SSH3-210ENST00000532881 FOXD4L4Q8WXT5 416 aaPredicted RBP18.39■□□□□ 0.54
SSH3-210ENST00000532881 KCNA6P17658 529 aa18.39■□□□□ 0.53
SSH3-210ENST00000532881 FAM43AQ8N2R8 423 aa18.39■□□□□ 0.53
SSH3-210ENST00000532881 IL17REQ8NFR9 667 aa18.39■□□□□ 0.53
SSH3-210ENST00000532881 NOL8Q76FK4 1167 aaKnown RBP18.38■□□□□ 0.53
SSH3-210ENST00000532881 FLT4P35916 1363 aa18.38■□□□□ 0.53
SSH3-210ENST00000532881 EIF5BO60841 1220 aaKnown RBP18.37■□□□□ 0.53
SSH3-210ENST00000532881 FLIIQ13045 1269 aa18.37■□□□□ 0.53
SSH3-210ENST00000532881 ABTB2Q8N961 1025 aa18.37■□□□□ 0.53
SSH3-210ENST00000532881 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
SSH3-210ENST00000532881 GRPEL1Q9HAV7 217 aa18.37■□□□□ 0.53
SSH3-210ENST00000532881 KIF24Q5T7B8 1368 aa18.37■□□□□ 0.53
SSH3-210ENST00000532881 PDE1AP54750 535 aa18.37■□□□□ 0.53
SSH3-210ENST00000532881 RGPD1P0DJD0 1748 aa18.37■□□□□ 0.53
SSH3-210ENST00000532881 TOPAZ1Q8N9V7 1692 aa18.36■□□□□ 0.53
SSH3-210ENST00000532881 SBNO1A3KN83 1393 aa18.36■□□□□ 0.53
SSH3-210ENST00000532881 HOXC9P31274 260 aa18.36■□□□□ 0.53
SSH3-210ENST00000532881 GBP4Q96PP9 640 aa18.36■□□□□ 0.53
SSH3-210ENST00000532881 STK31Q9BXU1 1019 aa18.36■□□□□ 0.53
SSH3-210ENST00000532881 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
SSH3-210ENST00000532881 SETD1BQ9UPS6 1966 aaKnown RBP18.35■□□□□ 0.53
SSH3-210ENST00000532881 ARHGEF10O15013 1369 aa18.35■□□□□ 0.53
SSH3-210ENST00000532881 ANXA1P04083 346 aa18.35■□□□□ 0.53
SSH3-210ENST00000532881 EIF2S2P20042 333 aaKnown RBP18.35■□□□□ 0.53
SSH3-210ENST00000532881 IL1RAPL2Q9NP60 686 aa18.35■□□□□ 0.53
SSH3-210ENST00000532881 LRRFIP2Q9Y608 721 aaKnown RBP18.35■□□□□ 0.53
SSH3-210ENST00000532881 MAP4K4O95819 1239 aaPredicted RBP18.35■□□□□ 0.53
SSH3-210ENST00000532881 MCTP1Q6DN14 999 aa18.35■□□□□ 0.53
SSH3-210ENST00000532881 UNC5CLQ8IV45 518 aa18.35■□□□□ 0.53
SSH3-210ENST00000532881 RILPL2Q969X0 211 aa18.35■□□□□ 0.53
SSH3-210ENST00000532881 CIZ1Q9ULV3 898 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms