RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 ERVK-9P63128 1117 aa11.05□□□□□ -0.64
CASP4-208ENST00000530309 PPP1R26Q5T8A7 1209 aaPredicted RBP11.05□□□□□ -0.64
CASP4-208ENST00000530309 ESF1Q9H501 851 aaKnown RBP11.05□□□□□ -0.64
CASP4-208ENST00000530309 TMPRSS4Q9NRS4 437 aa11.05□□□□□ -0.64
CASP4-208ENST00000530309 ZMIZ1Q9ULJ6 1067 aa11.05□□□□□ -0.64
CASP4-208ENST00000530309 PCDHGA11Q9Y5H2 935 aa11.05□□□□□ -0.64
CASP4-208ENST00000530309 ZBTB7BO15156 539 aaPredicted RBP11.04□□□□□ -0.64
CASP4-208ENST00000530309 NR3C2P08235 984 aa11.04□□□□□ -0.64
CASP4-208ENST00000530309 SCTRP47872 440 aa11.04□□□□□ -0.64
CASP4-208ENST00000530309 CC2D2BQ6DHV5 1058 aa11.04□□□□□ -0.64
CASP4-208ENST00000530309 WASF2Q9Y6W5 498 aa11.04□□□□□ -0.64
CASP4-208ENST00000530309 ANKMY2Q8IV38 441 aa11.03□□□□□ -0.64
CASP4-208ENST00000530309 ZNF784Q8NCA9 323 aaPredicted RBP11.03□□□□□ -0.64
CASP4-208ENST00000530309 STK32AQ8WU08 396 aa11.03□□□□□ -0.64
CASP4-208ENST00000530309 ZNF594Q96JF6 807 aaPredicted RBP11.03□□□□□ -0.64
CASP4-208ENST00000530309 CYLDQ9NQC7 956 aa11.03□□□□□ -0.64
CASP4-208ENST00000530309 EMILIN1Q9Y6C2 1016 aa11.03□□□□□ -0.64
CASP4-208ENST00000530309 TTC24A2A3L6 582 aaPredicted RBP11.02□□□□□ -0.65
CASP4-208ENST00000530309 TMEM88BA6NKF7 163 aa11.02□□□□□ -0.65
CASP4-208ENST00000530309 MYT1Q01538 1121 aa11.02□□□□□ -0.65
CASP4-208ENST00000530309 NNTQ13423 1086 aa11.02□□□□□ -0.65
CASP4-208ENST00000530309 CYP4X1Q8N118 509 aa11.02□□□□□ -0.65
CASP4-208ENST00000530309 SIX5Q8N196 739 aa11.02□□□□□ -0.65
CASP4-208ENST00000530309 FAM200AQ8TCP9 573 aa11.02□□□□□ -0.65
CASP4-208ENST00000530309 KIAA1024Q9UPX6 916 aa11.02□□□□□ -0.65
CASP4-208ENST00000530309 TNFRSF10AO00220 468 aa11.01□□□□□ -0.65
CASP4-208ENST00000530309 PSME1Q06323 249 aa11.01□□□□□ -0.65
CASP4-208ENST00000530309 DPYDQ12882 1025 aa11.01□□□□□ -0.65
CASP4-208ENST00000530309 TMEM164Q5U3C3 297 aa11.01□□□□□ -0.65
CASP4-208ENST00000530309 TOR4AQ9NXH8 423 aa11.01□□□□□ -0.65
CASP4-208ENST00000530309 PGPEP1Q9NXJ5 209 aa11.01□□□□□ -0.65
CASP4-208ENST00000530309 J3QL48 77 aa11□□□□□ -0.65
CASP4-208ENST00000530309 LILRA1O75019 489 aa11□□□□□ -0.65
CASP4-208ENST00000530309 DKK1O94907 266 aa11□□□□□ -0.65
CASP4-208ENST00000530309 PRR20EP86478 221 aa11□□□□□ -0.65
CASP4-208ENST00000530309 PRR20CP86479 221 aa11□□□□□ -0.65
CASP4-208ENST00000530309 PRR20DP86480 221 aa11□□□□□ -0.65
CASP4-208ENST00000530309 PRR20BP86481 221 aa11□□□□□ -0.65
CASP4-208ENST00000530309 PRR20AP86496 221 aa11□□□□□ -0.65
CASP4-208ENST00000530309 CCDC102BQ68D86 513 aa11□□□□□ -0.65
CASP4-208ENST00000530309 CARNS1A5YM72 827 aa10.99□□□□□ -0.65
CASP4-208ENST00000530309 RGS20O76081 388 aa10.99□□□□□ -0.65
CASP4-208ENST00000530309 TRIM67Q6ZTA4 783 aa10.99□□□□□ -0.65
CASP4-208ENST00000530309 TPCN2Q8NHX9 752 aa10.99□□□□□ -0.65
CASP4-208ENST00000530309 OSBPL3Q9H4L5 887 aa10.99□□□□□ -0.65
CASP4-208ENST00000530309 RBM19Q9Y4C8 960 aaKnown RBP10.99□□□□□ -0.65
CASP4-208ENST00000530309 ADD1P35611 737 aaKnown RBP10.97□□□□□ -0.65
CASP4-208ENST00000530309 SEC13P55735 322 aa10.97□□□□□ -0.65
CASP4-208ENST00000530309 SMPD1P17405 629 aa10.96□□□□□ -0.65
CASP4-208ENST00000530309 KCTD17Q8N5Z5 321 aa10.96□□□□□ -0.65
CASP4-208ENST00000530309 FAM69CQ0P6D2 419 aa10.95□□□□□ -0.66
CASP4-208ENST00000530309 CYP2U1Q7Z449 544 aa10.95□□□□□ -0.66
CASP4-208ENST00000530309 KLF16Q9BXK1 252 aaPredicted RBP10.95□□□□□ -0.66
CASP4-208ENST00000530309 SFI1A8K8P3 1242 aa10.94□□□□□ -0.66
CASP4-208ENST00000530309 SWI5Q1ZZU3 235 aa10.94□□□□□ -0.66
CASP4-208ENST00000530309 ITPKCQ96DU7 683 aa10.94□□□□□ -0.66
CASP4-208ENST00000530309 BRD1O95696 1058 aa10.93□□□□□ -0.66
CASP4-208ENST00000530309 GNRH1P01148 92 aa10.93□□□□□ -0.66
CASP4-208ENST00000530309 WDR4P57081 412 aaKnown RBP10.93□□□□□ -0.66
CASP4-208ENST00000530309 ZIC2O95409 532 aaPredicted RBP10.92□□□□□ -0.66
CASP4-208ENST00000530309 SCNN1DP51172 638 aa10.92□□□□□ -0.66
CASP4-208ENST00000530309 CLP1Q92989 425 aaKnown RBP10.92□□□□□ -0.66
CASP4-208ENST00000530309 TMEM229AB2RXF0 380 aa10.91□□□□□ -0.66
CASP4-208ENST00000530309 M0R2N6 131 aa10.91□□□□□ -0.66
CASP4-208ENST00000530309 WASLO00401 505 aaPredicted RBP10.91□□□□□ -0.66
CASP4-208ENST00000530309 TIMP2P16035 220 aa10.91□□□□□ -0.66
CASP4-208ENST00000530309 GDF10P55107 478 aa10.91□□□□□ -0.66
CASP4-208ENST00000530309 TRIM26Q12899 539 aaPredicted RBP10.91□□□□□ -0.66
CASP4-208ENST00000530309 Q6ZVU0 165 aa10.91□□□□□ -0.66
CASP4-208ENST00000530309 AEBP1Q8IUX7 1158 aa10.91□□□□□ -0.66
CASP4-208ENST00000530309 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.91□□□□□ -0.66
CASP4-208ENST00000530309 ZFAND3Q9H8U3 227 aa10.91□□□□□ -0.66
CASP4-208ENST00000530309 ADH1AP07327 375 aa10.9□□□□□ -0.66
CASP4-208ENST00000530309 CBLBQ13191 982 aa10.9□□□□□ -0.66
CASP4-208ENST00000530309 ESCO1Q5FWF5 840 aa10.9□□□□□ -0.66
CASP4-208ENST00000530309 B4GALNT3Q6L9W6 998 aa10.9□□□□□ -0.66
CASP4-208ENST00000530309 ZNF358Q9NW07 568 aa10.9□□□□□ -0.66
CASP4-208ENST00000530309 PDZRN3Q9UPQ7 1066 aa10.9□□□□□ -0.66
CASP4-208ENST00000530309 ZBTB7CA1YPR0 619 aa10.89□□□□□ -0.67
CASP4-208ENST00000530309 STAU1O95793 577 aaKnown RBP10.89□□□□□ -0.67
CASP4-208ENST00000530309 INHAP05111 366 aa10.89□□□□□ -0.67
CASP4-208ENST00000530309 HPS1Q92902 700 aa10.89□□□□□ -0.67
CASP4-208ENST00000530309 ETNK1Q9HBU6 452 aa10.89□□□□□ -0.67
CASP4-208ENST00000530309 SLAIN2Q9P270 581 aa10.89□□□□□ -0.67
CASP4-208ENST00000530309 BACH1O14867 736 aa10.88□□□□□ -0.67
CASP4-208ENST00000530309 KDF1Q8NAX2 398 aaPredicted RBP10.88□□□□□ -0.67
CASP4-208ENST00000530309 TSEN2Q8NCE0 465 aaKnown RBP10.88□□□□□ -0.67
CASP4-208ENST00000530309 HINFPQ9BQA5 517 aa10.88□□□□□ -0.67
CASP4-208ENST00000530309 ARHGEF10LQ9HCE6 1279 aa10.87□□□□□ -0.67
CASP4-208ENST00000530309 SSFA2P28290 1259 aa10.86□□□□□ -0.67
CASP4-208ENST00000530309 PTGIRP43119 386 aa10.86□□□□□ -0.67
CASP4-208ENST00000530309 RAB6BQ9NRW1 208 aa10.86□□□□□ -0.67
CASP4-208ENST00000530309 PATL2C9JE40 543 aaKnown RBP10.85□□□□□ -0.67
CASP4-208ENST00000530309 ATP2B4P23634 1241 aa10.85□□□□□ -0.67
CASP4-208ENST00000530309 KCNA1Q09470 495 aa10.85□□□□□ -0.67
CASP4-208ENST00000530309 XAGE2Q96GT9 111 aa10.85□□□□□ -0.67
CASP4-208ENST00000530309 AGBL1Q96MI9 1066 aa10.85□□□□□ -0.67
CASP4-208ENST00000530309 SLC4A9Q96Q91 983 aa10.85□□□□□ -0.67
CASP4-208ENST00000530309 SERTAD1Q9UHV2 236 aa10.85□□□□□ -0.67
CASP4-208ENST00000530309 A0A1W2PRU2 124 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 787 ms