RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 RRS1Q15050 365 aaKnown RBP10.05□□□□□ -0.8
CTNND1-221ENST00000529873 NFE2L2Q16236 605 aa10.05□□□□□ -0.8
CTNND1-221ENST00000529873 RNF214Q8ND24 703 aa10.05□□□□□ -0.8
CTNND1-221ENST00000529873 DCAF8L1A6NGE4 600 aa10.05□□□□□ -0.8
CTNND1-221ENST00000529873 CEBPZQ03701 1054 aaKnown RBP10.05□□□□□ -0.8
CTNND1-221ENST00000529873 TTLL5Q6EMB2 1281 aa10.05□□□□□ -0.8
CTNND1-221ENST00000529873 MPHOSPH8Q99549 860 aa10.05□□□□□ -0.8
CTNND1-221ENST00000529873 BCL11BQ9C0K0 894 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-221ENST00000529873 SF3B2Q13435 895 aaKnown RBP10.05□□□□□ -0.8
CTNND1-221ENST00000529873 SOGA3Q5TF21 947 aa10.05□□□□□ -0.8
CTNND1-221ENST00000529873 NUTM2BA6NNL0 878 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-221ENST00000529873 NUTM2EB1AL46 878 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-221ENST00000529873 STIM1Q13586 685 aa10.04□□□□□ -0.8
CTNND1-221ENST00000529873 NUTM2AQ8IVF1 878 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-221ENST00000529873 FIBPO43427 364 aa10.04□□□□□ -0.8
CTNND1-221ENST00000529873 CCDC192P0DO97 292 aa10.04□□□□□ -0.8
CTNND1-221ENST00000529873 ATP2B1P20020 1258 aa10.04□□□□□ -0.8
CTNND1-221ENST00000529873 TXLNBQ8N3L3 684 aa10.04□□□□□ -0.8
CTNND1-221ENST00000529873 CBFA2T2O43439 604 aa10.04□□□□□ -0.8
CTNND1-221ENST00000529873 KCNH5Q8NCM2 988 aa10.04□□□□□ -0.8
CTNND1-221ENST00000529873 ZNF428Q96B54 188 aa10.04□□□□□ -0.8
CTNND1-221ENST00000529873 TNMDQ9H2S6 317 aa10.04□□□□□ -0.8
CTNND1-221ENST00000529873 CTNNA3Q9UI47 895 aa10.04□□□□□ -0.8
CTNND1-221ENST00000529873 ATP2B2Q01814 1243 aa10.03□□□□□ -0.8
CTNND1-221ENST00000529873 ZNHIT6Q9NWK9 470 aaKnown RBP10.03□□□□□ -0.8
CTNND1-221ENST00000529873 SERPINC1P01008 464 aa10.03□□□□□ -0.8
CTNND1-221ENST00000529873 BRPF1P55201 1214 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-221ENST00000529873 NUP133Q8WUM0 1156 aa10.03□□□□□ -0.8
CTNND1-221ENST00000529873 WASF1Q92558 559 aa10.03□□□□□ -0.8
CTNND1-221ENST00000529873 NUDT16Q96DE0 195 aaKnown RBP10.03□□□□□ -0.8
CTNND1-221ENST00000529873 FKBP4Q02790 459 aaKnown RBP eCLIP10.03□□□□□ -0.8
CTNND1-221ENST00000529873 KRT32Q14532 448 aa10.03□□□□□ -0.8
CTNND1-221ENST00000529873 TSPYL1Q9H0U9 437 aa10.02□□□□□ -0.8
CTNND1-221ENST00000529873 SRGAP3O43295 1099 aa10.02□□□□□ -0.81
CTNND1-221ENST00000529873 RAB11FIP3O75154 756 aa10.02□□□□□ -0.81
CTNND1-221ENST00000529873 HMGB2P26583 209 aaKnown RBP10.02□□□□□ -0.81
CTNND1-221ENST00000529873 HSP90AB3PQ58FF7 597 aa10.02□□□□□ -0.81
CTNND1-221ENST00000529873 IGHMBP2P38935 993 aaKnown RBP10.02□□□□□ -0.81
CTNND1-221ENST00000529873 USP8P40818 1118 aa10.02□□□□□ -0.81
CTNND1-221ENST00000529873 RBM5P52756 815 aaKnown RBP eCLIP10.02□□□□□ -0.81
CTNND1-221ENST00000529873 KRT85P78386 507 aa10.02□□□□□ -0.81
CTNND1-221ENST00000529873 PPFIBP1Q86W92 1011 aa10.02□□□□□ -0.81
CTNND1-221ENST00000529873 RPAP2Q8IXW5 612 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-221ENST00000529873 PLCD4Q9BRC7 762 aa10.02□□□□□ -0.81
CTNND1-221ENST00000529873 INCENPQ9NQS7 918 aa10.02□□□□□ -0.81
CTNND1-221ENST00000529873 UNC13AQ9UPW8 1703 aa10.02□□□□□ -0.81
CTNND1-221ENST00000529873 GOLGA6L7A0A1B0GV03 622 aa10.02□□□□□ -0.81
CTNND1-221ENST00000529873 SLFN5Q08AF3 891 aa10.01□□□□□ -0.81
CTNND1-221ENST00000529873 LEKR1Q6ZMV7 388 aa10.01□□□□□ -0.81
CTNND1-221ENST00000529873 ADGRL1O94910 1474 aa10.01□□□□□ -0.81
CTNND1-221ENST00000529873 ME1P48163 572 aa10.01□□□□□ -0.81
CTNND1-221ENST00000529873 TDO2P48775 406 aa10.01□□□□□ -0.81
CTNND1-221ENST00000529873 LARP1BQ659C4 914 aaKnown RBP10.01□□□□□ -0.81
CTNND1-221ENST00000529873 BLOC1S2Q6QNY1 142 aa10.01□□□□□ -0.81
CTNND1-221ENST00000529873 RAPGEF3O95398 923 aa10.01□□□□□ -0.81
CTNND1-221ENST00000529873 CWC27Q6UX04 472 aaKnown RBP10.01□□□□□ -0.81
CTNND1-221ENST00000529873 JAKMIP1Q96N16 626 aaKnown RBP10.01□□□□□ -0.81
CTNND1-221ENST00000529873 TMPOP42166 694 aaKnown RBP10.01□□□□□ -0.81
CTNND1-221ENST00000529873 LUC7LQ9NQ29 371 aaKnown RBP10.01□□□□□ -0.81
CTNND1-221ENST00000529873 RAI14Q9P0K7 980 aa10.01□□□□□ -0.81
CTNND1-221ENST00000529873 NAIPQ13075 1403 aa10.01□□□□□ -0.81
CTNND1-221ENST00000529873 ERLIN2O94905 339 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 SPATA32Q96LK8 384 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 STARD3NLO95772 234 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 IMMTQ16891 758 aaKnown RBP10□□□□□ -0.81
CTNND1-221ENST00000529873 SPC24Q8NBT2 197 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 FMNL2Q96PY5 1086 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 UBAC1Q9BSL1 405 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 ALDH1L2Q3SY69 923 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 AXDND1Q5T1B0 1012 aaPredicted RBP10□□□□□ -0.81
CTNND1-221ENST00000529873 BACH2Q9BYV9 841 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 CEP131Q9UPN4 1083 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 PPP6R1Q9UPN7 881 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 ABCC11Q96J66 1382 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 CD109Q6YHK3 1445 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 NKTRP30414 1462 aaKnown RBP10□□□□□ -0.81
CTNND1-221ENST00000529873 MAP3K1Q13233 1512 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 TANGO6Q9C0B7 1094 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 CFAP45Q9UL16 551 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 AKAP2Q9Y2D5 859 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 PRDM11Q9NQV5 511 aa10□□□□□ -0.81
CTNND1-221ENST00000529873 DEF6Q9H4E7 631 aa9.99□□□□□ -0.81
CTNND1-221ENST00000529873 CEP126Q9P2H0 1117 aa9.99□□□□□ -0.81
CTNND1-221ENST00000529873 CEP57L1Q8IYX8 460 aa9.99□□□□□ -0.81
CTNND1-221ENST00000529873 TMEM57Q8N5G2 664 aa9.99□□□□□ -0.81
CTNND1-221ENST00000529873 ABCC5O15440 1437 aa9.99□□□□□ -0.81
CTNND1-221ENST00000529873 NCOA1Q15788 1441 aa9.99□□□□□ -0.81
CTNND1-221ENST00000529873 SLC26A8Q96RN1 970 aa9.99□□□□□ -0.81
CTNND1-221ENST00000529873 PEG3Q9GZU2 1588 aa9.99□□□□□ -0.81
CTNND1-221ENST00000529873 NUTM1Q86Y26 1132 aa9.98□□□□□ -0.81
CTNND1-221ENST00000529873 DYDC1Q8WWB3 177 aa9.98□□□□□ -0.81
CTNND1-221ENST00000529873 ZNF652Q9Y2D9 606 aa9.98□□□□□ -0.81
CTNND1-221ENST00000529873 CIZ1Q9ULV3 898 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-221ENST00000529873 AIDAQ96BJ3 306 aa9.98□□□□□ -0.81
CTNND1-221ENST00000529873 SMTNL1A8MU46 457 aa9.98□□□□□ -0.81
CTNND1-221ENST00000529873 DUSP27Q5VZP5 1158 aa9.98□□□□□ -0.81
CTNND1-221ENST00000529873 LRP2BPQ9P2M1 347 aa9.98□□□□□ -0.81
CTNND1-221ENST00000529873 GRIN2AQ12879 1464 aa9.98□□□□□ -0.81
CTNND1-221ENST00000529873 CASTP20810 708 aaKnown RBP9.98□□□□□ -0.81
CTNND1-221ENST00000529873 AMOTQ4VCS5 1084 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms