RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 RNF214Q8ND24 703 aa10.05□□□□□ -0.8
CTNND1-219ENST00000528621 GRIN2AQ12879 1464 aa10.05□□□□□ -0.8
CTNND1-219ENST00000528621 SLFN5Q08AF3 891 aa10.05□□□□□ -0.8
CTNND1-219ENST00000528621 PLEKHH1Q9ULM0 1364 aa10.05□□□□□ -0.8
CTNND1-219ENST00000528621 CEBPZQ03701 1054 aaKnown RBP10.05□□□□□ -0.8
CTNND1-219ENST00000528621 TTLL5Q6EMB2 1281 aa10.05□□□□□ -0.8
CTNND1-219ENST00000528621 MPHOSPH8Q99549 860 aa10.05□□□□□ -0.8
CTNND1-219ENST00000528621 CWC15Q9P013 229 aaKnown RBP10.05□□□□□ -0.8
CTNND1-219ENST00000528621 ITSN2Q9NZM3 1697 aa10.05□□□□□ -0.8
CTNND1-219ENST00000528621 SF3B2Q13435 895 aaKnown RBP10.05□□□□□ -0.8
CTNND1-219ENST00000528621 SOGA3Q5TF21 947 aa10.05□□□□□ -0.8
CTNND1-219ENST00000528621 ADGRL1O94910 1474 aa10.04□□□□□ -0.8
CTNND1-219ENST00000528621 NUTM2BA6NNL0 878 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-219ENST00000528621 NUTM2EB1AL46 878 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-219ENST00000528621 HMGN5P82970 282 aaKnown RBP10.04□□□□□ -0.8
CTNND1-219ENST00000528621 NUTM2AQ8IVF1 878 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-219ENST00000528621 ZNHIT6Q9NWK9 470 aaKnown RBP10.04□□□□□ -0.8
CTNND1-219ENST00000528621 ABCC5O15440 1437 aa10.04□□□□□ -0.8
CTNND1-219ENST00000528621 FIBPO43427 364 aa10.04□□□□□ -0.8
CTNND1-219ENST00000528621 ATP2B1P20020 1258 aa10.04□□□□□ -0.8
CTNND1-219ENST00000528621 KRT85P78386 507 aa10.04□□□□□ -0.8
CTNND1-219ENST00000528621 TNMDQ9H2S6 317 aa10.04□□□□□ -0.8
CTNND1-219ENST00000528621 CFAP45Q9UL16 551 aa10.04□□□□□ -0.8
CTNND1-219ENST00000528621 NKTRP30414 1462 aaKnown RBP10.04□□□□□ -0.8
CTNND1-219ENST00000528621 BACH2Q9BYV9 841 aa10.04□□□□□ -0.8
CTNND1-219ENST00000528621 IL27Q8NEV9 243 aa10.03□□□□□ -0.8
CTNND1-219ENST00000528621 ATP2B2Q01814 1243 aa10.03□□□□□ -0.8
CTNND1-219ENST00000528621 AKAP2Q9Y2D5 859 aa10.03□□□□□ -0.8
CTNND1-219ENST00000528621 CD109Q6YHK3 1445 aa10.03□□□□□ -0.8
CTNND1-219ENST00000528621 SERPINC1P01008 464 aa10.03□□□□□ -0.8
CTNND1-219ENST00000528621 AMOTQ4VCS5 1084 aa10.03□□□□□ -0.8
CTNND1-219ENST00000528621 STK11IPQ8N1F8 1099 aa10.03□□□□□ -0.8
CTNND1-219ENST00000528621 NUDT16Q96DE0 195 aaKnown RBP10.03□□□□□ -0.8
CTNND1-219ENST00000528621 CEP131Q9UPN4 1083 aa10.03□□□□□ -0.8
CTNND1-219ENST00000528621 BRPF1P55201 1214 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-219ENST00000528621 NUP133Q8WUM0 1156 aa10.03□□□□□ -0.8
CTNND1-219ENST00000528621 FKBP4Q02790 459 aaKnown RBP eCLIP10.03□□□□□ -0.8
CTNND1-219ENST00000528621 SCAF11Q99590 1463 aaKnown RBP10.02□□□□□ -0.8
CTNND1-219ENST00000528621 ERLIN2O94905 339 aa10.02□□□□□ -0.8
CTNND1-219ENST00000528621 PEG3Q9GZU2 1588 aa10.02□□□□□ -0.81
CTNND1-219ENST00000528621 SRGAP3O43295 1099 aa10.02□□□□□ -0.81
CTNND1-219ENST00000528621 TMPOP42166 694 aaKnown RBP10.02□□□□□ -0.81
CTNND1-219ENST00000528621 IGHMBP2P38935 993 aaKnown RBP10.02□□□□□ -0.81
CTNND1-219ENST00000528621 RBM5P52756 815 aaKnown RBP eCLIP10.02□□□□□ -0.81
CTNND1-219ENST00000528621 PPFIBP1Q86W92 1011 aa10.02□□□□□ -0.81
CTNND1-219ENST00000528621 BLOC1S2Q6QNY1 142 aa10.02□□□□□ -0.81
CTNND1-219ENST00000528621 STARD3NLO95772 234 aa10.01□□□□□ -0.81
CTNND1-219ENST00000528621 ME1P48163 572 aa10.01□□□□□ -0.81
CTNND1-219ENST00000528621 TDO2P48775 406 aa10.01□□□□□ -0.81
CTNND1-219ENST00000528621 VSIG10Q8N0Z9 540 aa10.01□□□□□ -0.81
CTNND1-219ENST00000528621 SMTNL1A8MU46 457 aa10.01□□□□□ -0.81
CTNND1-219ENST00000528621 LARP1BQ659C4 914 aaKnown RBP10.01□□□□□ -0.81
CTNND1-219ENST00000528621 LRPPRCP42704 1394 aaKnown RBP10.01□□□□□ -0.81
CTNND1-219ENST00000528621 RAPGEF3O95398 923 aa10.01□□□□□ -0.81
CTNND1-219ENST00000528621 CWC27Q6UX04 472 aaKnown RBP10.01□□□□□ -0.81
CTNND1-219ENST00000528621 JAKMIP1Q96N16 626 aaKnown RBP10.01□□□□□ -0.81
CTNND1-219ENST00000528621 ZNF287Q9HBT7 754 aa10.01□□□□□ -0.81
CTNND1-219ENST00000528621 RAI14Q9P0K7 980 aa10.01□□□□□ -0.81
CTNND1-219ENST00000528621 CCDC61Q9Y6R9 512 aa10.01□□□□□ -0.81
CTNND1-219ENST00000528621 IMMTQ16891 758 aaKnown RBP10□□□□□ -0.81
CTNND1-219ENST00000528621 IQCEQ6IPM2 695 aa10□□□□□ -0.81
CTNND1-219ENST00000528621 SPATA32Q96LK8 384 aa10□□□□□ -0.81
CTNND1-219ENST00000528621 CEP126Q9P2H0 1117 aa10□□□□□ -0.81
CTNND1-219ENST00000528621 FBXO3Q9UK99 471 aa10□□□□□ -0.81
CTNND1-219ENST00000528621 SPC24Q8NBT2 197 aa10□□□□□ -0.81
CTNND1-219ENST00000528621 FMNL2Q96PY5 1086 aa10□□□□□ -0.81
CTNND1-219ENST00000528621 UBAC1Q9BSL1 405 aa10□□□□□ -0.81
CTNND1-219ENST00000528621 BCL11BQ9C0K0 894 aaPredicted RBP10□□□□□ -0.81
CTNND1-219ENST00000528621 ZNF652Q9Y2D9 606 aa10□□□□□ -0.81
CTNND1-219ENST00000528621 KIF1BPQ96EK5 621 aa10□□□□□ -0.81
CTNND1-219ENST00000528621 TANGO6Q9C0B7 1094 aa10□□□□□ -0.81
CTNND1-219ENST00000528621 PRDM11Q9NQV5 511 aa10□□□□□ -0.81
CTNND1-219ENST00000528621 DHX29Q7Z478 1369 aaKnown RBP9.99□□□□□ -0.81
CTNND1-219ENST00000528621 PTPRCP08575 1304 aa9.99□□□□□ -0.81
CTNND1-219ENST00000528621 TTC21BQ7Z4L5 1316 aa9.99□□□□□ -0.81
CTNND1-219ENST00000528621 LARP1Q6PKG0 1096 aaKnown RBP9.99□□□□□ -0.81
CTNND1-219ENST00000528621 DEF6Q9H4E7 631 aa9.99□□□□□ -0.81
CTNND1-219ENST00000528621 CEP57L1Q8IYX8 460 aa9.99□□□□□ -0.81
CTNND1-219ENST00000528621 TMEM57Q8N5G2 664 aa9.99□□□□□ -0.81
CTNND1-219ENST00000528621 HMGB1P09429 215 aaKnown RBP9.99□□□□□ -0.81
CTNND1-219ENST00000528621 SLC26A8Q96RN1 970 aa9.99□□□□□ -0.81
CTNND1-219ENST00000528621 EIF2AK4Q9P2K8 1649 aaKnown RBP9.99□□□□□ -0.81
CTNND1-219ENST00000528621 HSP90AB3PQ58FF7 597 aa9.98□□□□□ -0.81
CTNND1-219ENST00000528621 NUTM1Q86Y26 1132 aa9.98□□□□□ -0.81
CTNND1-219ENST00000528621 BMP2KQ9NSY1 1161 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-219ENST00000528621 AIDAQ96BJ3 306 aa9.98□□□□□ -0.81
CTNND1-219ENST00000528621 RAPGEF6Q8TEU7 1601 aa9.98□□□□□ -0.81
CTNND1-219ENST00000528621 GLRX3O76003 335 aaKnown RBP9.98□□□□□ -0.81
CTNND1-219ENST00000528621 DUSP27Q5VZP5 1158 aa9.98□□□□□ -0.81
CTNND1-219ENST00000528621 PHAXQ9H814 394 aaKnown RBP9.98□□□□□ -0.81
CTNND1-219ENST00000528621 LRP2BPQ9P2M1 347 aa9.98□□□□□ -0.81
CTNND1-219ENST00000528621 CASTP20810 708 aaKnown RBP9.98□□□□□ -0.81
CTNND1-219ENST00000528621 TAF7Q15545 349 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-219ENST00000528621 ZHX3Q9H4I2 956 aa9.98□□□□□ -0.81
CTNND1-219ENST00000528621 TMOD3Q9NYL9 352 aa9.98□□□□□ -0.81
CTNND1-219ENST00000528621 CCDC181Q5TID7 509 aa9.97□□□□□ -0.81
CTNND1-219ENST00000528621 SPINK5Q9NQ38 1064 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-219ENST00000528621 ANKRD18AQ8IVF6 992 aa9.97□□□□□ -0.81
CTNND1-219ENST00000528621 NUP62CLQ9H1M0 184 aa9.97□□□□□ -0.81
CTNND1-219ENST00000528621 PPP1R1BQ9UD71 204 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms