RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 TTC22Q5TAA0 569 aa22.2■■□□□ 1.14
IKBKB-228ENST00000523517 RBM42Q9BTD8 480 aaKnown RBP22.2■■□□□ 1.14
IKBKB-228ENST00000523517 PTPRCP08575 1304 aa22.2■■□□□ 1.14
IKBKB-228ENST00000523517 HSP90AA1P07900 732 aaKnown RBP22.19■■□□□ 1.14
IKBKB-228ENST00000523517 CEP85Q6P2H3 762 aa22.19■■□□□ 1.14
IKBKB-228ENST00000523517 ARXQ96QS3 562 aa22.19■■□□□ 1.14
IKBKB-228ENST00000523517 USP6P35125 1406 aa22.19■■□□□ 1.14
IKBKB-228ENST00000523517 NUTM2FA1L443 756 aa22.18■■□□□ 1.14
IKBKB-228ENST00000523517 C16orf71Q8IYS4 520 aaPredicted RBP22.18■■□□□ 1.14
IKBKB-228ENST00000523517 GBP4Q96PP9 640 aa22.18■■□□□ 1.14
IKBKB-228ENST00000523517 USP31Q70CQ4 1352 aa22.18■■□□□ 1.14
IKBKB-228ENST00000523517 CRB1P82279 1406 aa22.17■■□□□ 1.14
IKBKB-228ENST00000523517 RTL1A6NKG5 1358 aa22.16■■□□□ 1.14
IKBKB-228ENST00000523517 MSH6P52701 1360 aa22.16■■□□□ 1.14
IKBKB-228ENST00000523517 FOXD4L1Q9NU39 408 aa22.16■■□□□ 1.14
IKBKB-228ENST00000523517 MEIS3Q99687 375 aa22.14■■□□□ 1.14
IKBKB-228ENST00000523517 PLEKHG1Q9ULL1 1385 aa22.14■■□□□ 1.14
IKBKB-228ENST00000523517 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.14■■□□□ 1.13
IKBKB-228ENST00000523517 MRE11P49959 708 aa22.14■■□□□ 1.13
IKBKB-228ENST00000523517 GAS2L2Q8NHY3 880 aa22.14■■□□□ 1.13
IKBKB-228ENST00000523517 OTUD7AQ8TE49 926 aaPredicted RBP22.14■■□□□ 1.13
IKBKB-228ENST00000523517 SLC4A2P04920 1241 aa22.13■■□□□ 1.13
IKBKB-228ENST00000523517 LTKP29376 864 aa22.13■■□□□ 1.13
IKBKB-228ENST00000523517 ARHGEF10O15013 1369 aa22.13■■□□□ 1.13
IKBKB-228ENST00000523517 SSH2Q76I76 1423 aa22.13■■□□□ 1.13
IKBKB-228ENST00000523517 SOX12O15370 315 aa22.13■■□□□ 1.13
IKBKB-228ENST00000523517 RABEP1Q15276 862 aa22.13■■□□□ 1.13
IKBKB-228ENST00000523517 PANK2Q9BZ23 570 aa22.13■■□□□ 1.13
IKBKB-228ENST00000523517 PEAK1Q9H792 1746 aa22.13■■□□□ 1.13
IKBKB-228ENST00000523517 MAP3K19Q56UN5 1328 aa22.12■■□□□ 1.13
IKBKB-228ENST00000523517 TOPAZ1Q8N9V7 1692 aa22.12■■□□□ 1.13
IKBKB-228ENST00000523517 USP26Q9BXU7 913 aa22.12■■□□□ 1.13
IKBKB-228ENST00000523517 MIS18AQ9NYP9 233 aa22.12■■□□□ 1.13
IKBKB-228ENST00000523517 ISY1Q9ULR0 285 aaKnown RBP22.12■■□□□ 1.13
IKBKB-228ENST00000523517 UBR1Q8IWV7 1749 aa22.12■■□□□ 1.13
IKBKB-228ENST00000523517 PTMSP20962 102 aa22.11■■□□□ 1.13
IKBKB-228ENST00000523517 FOXO3O43524 673 aa22.11■■□□□ 1.13
IKBKB-228ENST00000523517 SMARCA5O60264 1052 aaPredicted RBP22.11■■□□□ 1.13
IKBKB-228ENST00000523517 MTHFSDQ2M296 383 aaKnown RBP22.11■■□□□ 1.13
IKBKB-228ENST00000523517 SKOR2Q2VWA4 1001 aaPredicted RBP22.11■■□□□ 1.13
IKBKB-228ENST00000523517 RGPD1P0DJD0 1748 aa22.11■■□□□ 1.13
IKBKB-228ENST00000523517 SDSP20132 328 aa22.1■■□□□ 1.13
IKBKB-228ENST00000523517 TTC21AQ8NDW8 1320 aa22.1■■□□□ 1.13
IKBKB-228ENST00000523517 RTF1Q92541 710 aaKnown RBP22.1■■□□□ 1.13
IKBKB-228ENST00000523517 RRAGDQ9NQL2 400 aaPredicted RBP22.1■■□□□ 1.13
IKBKB-228ENST00000523517 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.1■■□□□ 1.13
IKBKB-228ENST00000523517 TSPYL4Q9UJ04 414 aa22.09■■□□□ 1.13
IKBKB-228ENST00000523517 APBB1O00213 710 aa22.09■■□□□ 1.13
IKBKB-228ENST00000523517 PTPRUQ92729 1446 aa22.09■■□□□ 1.13
IKBKB-228ENST00000523517 GRPEL1Q9HAV7 217 aa22.09■■□□□ 1.13
IKBKB-228ENST00000523517 CASC1Q6TDU7 716 aa22.08■■□□□ 1.13
IKBKB-228ENST00000523517 SLC26A8Q96RN1 970 aa22.08■■□□□ 1.13
IKBKB-228ENST00000523517 NALCNQ8IZF0 1738 aa22.08■■□□□ 1.12
IKBKB-228ENST00000523517 HMMRO75330 724 aa22.07■■□□□ 1.12
IKBKB-228ENST00000523517 SSFA2P28290 1259 aa22.07■■□□□ 1.12
IKBKB-228ENST00000523517 CCT4P50991 539 aaKnown RBP22.07■■□□□ 1.12
IKBKB-228ENST00000523517 G2E3Q7L622 706 aa22.07■■□□□ 1.12
IKBKB-228ENST00000523517 SBNO1A3KN83 1393 aa22.07■■□□□ 1.12
IKBKB-228ENST00000523517 CLEC17AQ6ZS10 378 aa22.06■■□□□ 1.12
IKBKB-228ENST00000523517 FLT4P35916 1363 aa22.06■■□□□ 1.12
IKBKB-228ENST00000523517 SLC4A10Q6U841 1118 aa22.05■■□□□ 1.12
IKBKB-228ENST00000523517 KDRP35968 1356 aa22.05■■□□□ 1.12
IKBKB-228ENST00000523517 F6X3S4 739 aa22.05■■□□□ 1.12
IKBKB-228ENST00000523517 AMOTL2Q9Y2J4 779 aa22.04■■□□□ 1.12
IKBKB-228ENST00000523517 EYA1Q99502 592 aa22.04■■□□□ 1.12
IKBKB-228ENST00000523517 EID1Q9Y6B2 187 aa22.03■■□□□ 1.12
IKBKB-228ENST00000523517 IGSF1Q8N6C5 1336 aa22.03■■□□□ 1.12
IKBKB-228ENST00000523517 AMPHP49418 695 aa22.03■■□□□ 1.12
IKBKB-228ENST00000523517 GOLGA6L22H0YM25 854 aa22.02■■□□□ 1.12
IKBKB-228ENST00000523517 NGDNQ8NEJ9 315 aaKnown RBP22.02■■□□□ 1.12
IKBKB-228ENST00000523517 OSBPL3Q9H4L5 887 aa22.02■■□□□ 1.12
IKBKB-228ENST00000523517 REC8O95072 547 aa22.02■■□□□ 1.11
IKBKB-228ENST00000523517 BAG4O95429 457 aaKnown RBP22.01■■□□□ 1.11
IKBKB-228ENST00000523517 GNAI2P04899 355 aa22.01■■□□□ 1.11
IKBKB-228ENST00000523517 GAS2L3Q86XJ1 694 aa22.01■■□□□ 1.11
IKBKB-228ENST00000523517 HTATSF1O43719 755 aaKnown RBP22■■□□□ 1.11
IKBKB-228ENST00000523517 PDE1AP54750 535 aa22■■□□□ 1.11
IKBKB-228ENST00000523517 STK31Q9BXU1 1019 aa22■■□□□ 1.11
IKBKB-228ENST00000523517 ERC2O15083 957 aa21.99■■□□□ 1.11
IKBKB-228ENST00000523517 NUCB2P80303 420 aa21.99■■□□□ 1.11
IKBKB-228ENST00000523517 TBX22Q9Y458 520 aa21.99■■□□□ 1.11
IKBKB-228ENST00000523517 CEP170BQ9Y4F5 1589 aaPredicted RBP21.99■■□□□ 1.11
IKBKB-228ENST00000523517 CEBPAP49715 358 aaPredicted RBP21.98■■□□□ 1.11
IKBKB-228ENST00000523517 ST18O60284 1047 aa21.98■■□□□ 1.11
IKBKB-228ENST00000523517 CWC22Q9HCG8 908 aaKnown RBP21.97■■□□□ 1.11
IKBKB-228ENST00000523517 CYP2E1P05181 493 aaPredicted RBP21.96■■□□□ 1.11
IKBKB-228ENST00000523517 FLIIQ13045 1269 aa21.96■■□□□ 1.11
IKBKB-228ENST00000523517 CCDC30Q5VVM6 783 aa21.96■■□□□ 1.11
IKBKB-228ENST00000523517 KLHL40Q2TBA0 621 aa21.96■■□□□ 1.11
IKBKB-228ENST00000523517 EXOC6BQ9Y2D4 811 aa21.95■■□□□ 1.1
IKBKB-228ENST00000523517 RIMS1Q86UR5 1692 aaKnown RBP21.95■■□□□ 1.1
IKBKB-228ENST00000523517 GNAT3A8MTJ3 354 aa21.95■■□□□ 1.1
IKBKB-228ENST00000523517 GNAI3P08754 354 aa21.95■■□□□ 1.1
IKBKB-228ENST00000523517 NLRP6P59044 892 aa21.95■■□□□ 1.1
IKBKB-228ENST00000523517 FKBP5Q13451 457 aaPredicted RBP21.94■■□□□ 1.1
IKBKB-228ENST00000523517 DDX49Q9Y6V7 483 aaKnown RBP21.94■■□□□ 1.1
IKBKB-228ENST00000523517 SALL3Q9BXA9 1300 aa21.93■■□□□ 1.1
IKBKB-228ENST00000523517 DIP2AQ14689 1571 aa21.93■■□□□ 1.1
IKBKB-228ENST00000523517 KIF13AQ9H1H9 1805 aa21.93■■□□□ 1.1
IKBKB-228ENST00000523517 LRRCC1Q9C099 1032 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms