RNA–Protein interactions for RNA: ENST00000520482.1

DENND3-212, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 2,883 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-212ENST00000520482 VSIG10Q8N0Z9 540 aa15.48■□□□□ 0.07
DENND3-212ENST00000520482 PEAK1Q9H792 1746 aa15.48■□□□□ 0.07
DENND3-212ENST00000520482 PIK3R4Q99570 1358 aa15.48■□□□□ 0.07
DENND3-212ENST00000520482 SPRYD3Q8NCJ5 442 aa15.48■□□□□ 0.07
DENND3-212ENST00000520482 C22orf23Q9BZE7 217 aa15.48■□□□□ 0.07
DENND3-212ENST00000520482 SIRT2Q8IXJ6 389 aa15.47■□□□□ 0.07
DENND3-212ENST00000520482 A0A0U1RQG5 324 aaPredicted RBP15.47■□□□□ 0.07
DENND3-212ENST00000520482 BCL11BQ9C0K0 894 aaPredicted RBP15.46■□□□□ 0.06
DENND3-212ENST00000520482 NPHP4O75161 1426 aaPredicted RBP15.45■□□□□ 0.06
DENND3-212ENST00000520482 API5Q9BZZ5 524 aaKnown RBP15.45■□□□□ 0.06
DENND3-212ENST00000520482 FOXO3O43524 673 aa15.45■□□□□ 0.06
DENND3-212ENST00000520482 NGDNQ8NEJ9 315 aaKnown RBP15.45■□□□□ 0.06
DENND3-212ENST00000520482 MIS18AQ9NYP9 233 aa15.45■□□□□ 0.06
DENND3-212ENST00000520482 MAP3K19Q56UN5 1328 aa15.44■□□□□ 0.06
DENND3-212ENST00000520482 ZNF142P52746 1687 aaPredicted RBP15.44■□□□□ 0.06
DENND3-212ENST00000520482 RRAGDQ9NQL2 400 aaPredicted RBP15.44■□□□□ 0.06
DENND3-212ENST00000520482 RGPD8O14715 1765 aaPredicted RBP15.43■□□□□ 0.06
DENND3-212ENST00000520482 USP31Q70CQ4 1352 aa15.43■□□□□ 0.06
DENND3-212ENST00000520482 ARXQ96QS3 562 aa15.43■□□□□ 0.06
DENND3-212ENST00000520482 CHMP4BQ9H444 224 aaKnown RBP15.43■□□□□ 0.06
DENND3-212ENST00000520482 SSH2Q76I76 1423 aa15.43■□□□□ 0.06
DENND3-212ENST00000520482 CHL1O00533 1208 aa15.43■□□□□ 0.06
DENND3-212ENST00000520482 GCC1Q96CN9 775 aa15.43■□□□□ 0.06
DENND3-212ENST00000520482 ANTXR1Q9H6X2 564 aa15.43■□□□□ 0.06
DENND3-212ENST00000520482 NALCNQ8IZF0 1738 aa15.43■□□□□ 0.06
DENND3-212ENST00000520482 NUTM2GQ5VZR2 741 aa15.42■□□□□ 0.06
DENND3-212ENST00000520482 RRP9O43818 475 aaKnown RBP15.41■□□□□ 0.06
DENND3-212ENST00000520482 MTHFSDQ2M296 383 aaKnown RBP15.41■□□□□ 0.06
DENND3-212ENST00000520482 C14orf37Q86TY3 774 aa15.41■□□□□ 0.06
DENND3-212ENST00000520482 RGPD1P0DJD0 1748 aa15.41■□□□□ 0.06
DENND3-212ENST00000520482 AMPHP49418 695 aa15.4■□□□□ 0.06
DENND3-212ENST00000520482 TTC21AQ8NDW8 1320 aa15.4■□□□□ 0.06
DENND3-212ENST00000520482 DIP2AQ14689 1571 aa15.39■□□□□ 0.05
DENND3-212ENST00000520482 BMP2KLQ5H9B9 411 aa15.39■□□□□ 0.05
DENND3-212ENST00000520482 HSP90AA2PQ14568 343 aaPredicted RBP15.38■□□□□ 0.05
DENND3-212ENST00000520482 EYA1Q99502 592 aa15.38■□□□□ 0.05
DENND3-212ENST00000520482 CRB1P82279 1406 aa15.38■□□□□ 0.05
DENND3-212ENST00000520482 LMTK3Q96Q04 1460 aa15.38■□□□□ 0.05
DENND3-212ENST00000520482 RGS12O14924 1447 aa15.38■□□□□ 0.05
DENND3-212ENST00000520482 ARHGEF10O15013 1369 aa15.38■□□□□ 0.05
DENND3-212ENST00000520482 NLRP6P59044 892 aa15.38■□□□□ 0.05
DENND3-212ENST00000520482 INTS3Q68E01 1043 aaKnown RBP15.38■□□□□ 0.05
DENND3-212ENST00000520482 SBNO1A3KN83 1393 aa15.37■□□□□ 0.05
DENND3-212ENST00000520482 FLT4P35916 1363 aa15.37■□□□□ 0.05
DENND3-212ENST00000520482 FMN2Q9NZ56 1722 aa15.37■□□□□ 0.05
DENND3-212ENST00000520482 RTF1Q92541 710 aaKnown RBP15.37■□□□□ 0.05
DENND3-212ENST00000520482 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
DENND3-212ENST00000520482 TSPYL4Q9UJ04 414 aa15.36■□□□□ 0.05
DENND3-212ENST00000520482 KIAA0232Q92628 1395 aa15.36■□□□□ 0.05
DENND3-212ENST00000520482 PROSER2Q86WR7 435 aaPredicted RBP15.36■□□□□ 0.05
DENND3-212ENST00000520482 L1TD1Q5T7N2 865 aaKnown RBP15.35■□□□□ 0.05
DENND3-212ENST00000520482 G2E3Q7L622 706 aa15.35■□□□□ 0.05
DENND3-212ENST00000520482 C16orf71Q8IYS4 520 aaPredicted RBP15.35■□□□□ 0.05
DENND3-212ENST00000520482 PIK3C2AO00443 1686 aa15.35■□□□□ 0.05
DENND3-212ENST00000520482 MSH6P52701 1360 aa15.35■□□□□ 0.05
DENND3-212ENST00000520482 TBC1D9Q6ZT07 1266 aa15.35■□□□□ 0.05
DENND3-212ENST00000520482 APBB1O00213 710 aa15.34■□□□□ 0.05
DENND3-212ENST00000520482 RBM25P49756 843 aaKnown RBP15.34■□□□□ 0.05
DENND3-212ENST00000520482 LTV1Q96GA3 475 aaPredicted RBP15.34■□□□□ 0.05
DENND3-212ENST00000520482 MEIS3Q99687 375 aa15.34■□□□□ 0.05
DENND3-212ENST00000520482 DCTPP1Q9H773 170 aa15.34■□□□□ 0.05
DENND3-212ENST00000520482 KIF24Q5T7B8 1368 aa15.34■□□□□ 0.05
DENND3-212ENST00000520482 HSP90AA1P07900 732 aaKnown RBP15.34■□□□□ 0.05
DENND3-212ENST00000520482 HAP1P54257 671 aaPredicted RBP15.34■□□□□ 0.05
DENND3-212ENST00000520482 RBM10P98175 930 aaKnown RBP15.34■□□□□ 0.05
DENND3-212ENST00000520482 HSCBQ8IWL3 235 aa15.34■□□□□ 0.05
DENND3-212ENST00000520482 IGSF1Q8N6C5 1336 aa15.33■□□□□ 0.05
DENND3-212ENST00000520482 F6X3S4 739 aa15.33■□□□□ 0.04
DENND3-212ENST00000520482 GSPT1P15170 499 aaKnown RBP15.33■□□□□ 0.04
DENND3-212ENST00000520482 PLEKHM2Q8IWE5 1019 aa15.33■□□□□ 0.04
DENND3-212ENST00000520482 ANKRD44Q8N8A2 993 aa15.33■□□□□ 0.04
DENND3-212ENST00000520482 ATP10DQ9P241 1426 aa15.33■□□□□ 0.04
DENND3-212ENST00000520482 CEP85Q6P2H3 762 aa15.33■□□□□ 0.04
DENND3-212ENST00000520482 SLC4A10Q6U841 1118 aa15.33■□□□□ 0.04
DENND3-212ENST00000520482 KDRP35968 1356 aa15.32■□□□□ 0.04
DENND3-212ENST00000520482 SMARCA5O60264 1052 aaPredicted RBP15.32■□□□□ 0.04
DENND3-212ENST00000520482 OTUD7AQ8TE49 926 aaPredicted RBP15.32■□□□□ 0.04
DENND3-212ENST00000520482 NAP1L5Q96NT1 182 aaPredicted RBP15.32■□□□□ 0.04
DENND3-212ENST00000520482 PTPRCP08575 1304 aa15.32■□□□□ 0.04
DENND3-212ENST00000520482 XRN1Q8IZH2 1706 aaKnown RBP15.31■□□□□ 0.04
DENND3-212ENST00000520482 RTL1A6NKG5 1358 aa15.31■□□□□ 0.04
DENND3-212ENST00000520482 HOXC9P31274 260 aa15.31■□□□□ 0.04
DENND3-212ENST00000520482 ABTB2Q8N961 1025 aa15.31■□□□□ 0.04
DENND3-212ENST00000520482 NECTIN2Q92692 538 aa15.31■□□□□ 0.04
DENND3-212ENST00000520482 GAS2L2Q8NHY3 880 aa15.31■□□□□ 0.04
DENND3-212ENST00000520482 CLCN1P35523 988 aa15.3■□□□□ 0.04
DENND3-212ENST00000520482 KIF2CQ99661 725 aa15.3■□□□□ 0.04
DENND3-212ENST00000520482 ZNF335Q9H4Z2 1342 aaPredicted RBP15.3■□□□□ 0.04
DENND3-212ENST00000520482 USHBP1Q8N6Y0 703 aa15.3■□□□□ 0.04
DENND3-212ENST00000520482 RPAP2Q8IXW5 612 aaPredicted RBP15.3■□□□□ 0.04
DENND3-212ENST00000520482 RBM42Q9BTD8 480 aaKnown RBP15.3■□□□□ 0.04
DENND3-212ENST00000520482 CHMP5Q9NZZ3 219 aa15.3■□□□□ 0.04
DENND3-212ENST00000520482 CDC45O75419 566 aa15.29■□□□□ 0.04
DENND3-212ENST00000520482 CHD2O14647 1828 aaKnown RBP15.28■□□□□ 0.04
DENND3-212ENST00000520482 CD2BP2O95400 341 aaKnown RBP15.28■□□□□ 0.04
DENND3-212ENST00000520482 ESCO1Q5FWF5 840 aa15.28■□□□□ 0.04
DENND3-212ENST00000520482 TTC22Q5TAA0 569 aa15.28■□□□□ 0.04
DENND3-212ENST00000520482 ORAI2Q96SN7 254 aa15.28■□□□□ 0.04
DENND3-212ENST00000520482 MARF1Q9Y4F3 1742 aaKnown RBP15.27■□□□□ 0.04
DENND3-212ENST00000520482 GNAT3A8MTJ3 354 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms