RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 KDM5DQ9BY66 1539 aa10.14□□□□□ -0.79
PCM1-212ENST00000519253 KIF2AO00139 706 aaPredicted RBP10.14□□□□□ -0.79
PCM1-212ENST00000519253 PPP4R3BQ5MIZ7 849 aa10.14□□□□□ -0.79
PCM1-212ENST00000519253 GTPBP4Q9BZE4 634 aaKnown RBP10.14□□□□□ -0.79
PCM1-212ENST00000519253 MBIPQ9NS73 344 aa10.14□□□□□ -0.79
PCM1-212ENST00000519253 CCP110O43303 1012 aa10.14□□□□□ -0.79
PCM1-212ENST00000519253 PLEKHM2Q8IWE5 1019 aa10.14□□□□□ -0.79
PCM1-212ENST00000519253 ZNF692Q9BU19 519 aaPredicted RBP10.14□□□□□ -0.79
PCM1-212ENST00000519253 SH2B1Q9NRF2 756 aaPredicted RBP10.14□□□□□ -0.79
PCM1-212ENST00000519253 EXOC6BQ9Y2D4 811 aa10.14□□□□□ -0.79
PCM1-212ENST00000519253 LIMCH1Q9UPQ0 1083 aa10.13□□□□□ -0.79
PCM1-212ENST00000519253 KINO60870 393 aaKnown RBP10.13□□□□□ -0.79
PCM1-212ENST00000519253 VAMP4O75379 141 aa10.13□□□□□ -0.79
PCM1-212ENST00000519253 LMBRD1Q9NUN5 540 aa10.13□□□□□ -0.79
PCM1-212ENST00000519253 NECTIN2Q92692 538 aa10.13□□□□□ -0.79
PCM1-212ENST00000519253 SCAND2PQ9GZW5 306 aaPredicted RBP10.13□□□□□ -0.79
PCM1-212ENST00000519253 PDRG1Q9NUG6 133 aa10.13□□□□□ -0.79
PCM1-212ENST00000519253 CGNQ9P2M7 1197 aaKnown RBP10.13□□□□□ -0.79
PCM1-212ENST00000519253 PLCH2O75038 1416 aa10.13□□□□□ -0.79
PCM1-212ENST00000519253 MLECQ14165 292 aa10.13□□□□□ -0.79
PCM1-212ENST00000519253 EIF4G3O43432 1585 aaKnown RBP10.13□□□□□ -0.79
PCM1-212ENST00000519253 ERC1Q8IUD2 1116 aa10.12□□□□□ -0.79
PCM1-212ENST00000519253 CEP170Q5SW79 1584 aa10.12□□□□□ -0.79
PCM1-212ENST00000519253 TEFQ10587 303 aa10.12□□□□□ -0.79
PCM1-212ENST00000519253 SDF4Q9BRK5 362 aa10.12□□□□□ -0.79
PCM1-212ENST00000519253 EIF2S2P20042 333 aaKnown RBP10.12□□□□□ -0.79
PCM1-212ENST00000519253 SBNO2Q9Y2G9 1366 aa10.12□□□□□ -0.79
PCM1-212ENST00000519253 ZHX1Q9UKY1 873 aaPredicted RBP10.12□□□□□ -0.79
PCM1-212ENST00000519253 TAOK2Q9UL54 1235 aa10.12□□□□□ -0.79
PCM1-212ENST00000519253 HCLS1P14317 486 aaPredicted RBP10.12□□□□□ -0.79
PCM1-212ENST00000519253 SPATA32Q96LK8 384 aa10.12□□□□□ -0.79
PCM1-212ENST00000519253 GDPD2Q9HCC8 539 aa10.12□□□□□ -0.79
PCM1-212ENST00000519253 PRDM15P57071 1507 aaPredicted RBP10.12□□□□□ -0.79
PCM1-212ENST00000519253 FYB1O15117 783 aa10.11□□□□□ -0.79
PCM1-212ENST00000519253 STX6O43752 255 aa10.11□□□□□ -0.79
PCM1-212ENST00000519253 NEMFO60524 1076 aa10.11□□□□□ -0.79
PCM1-212ENST00000519253 RAB11FIP3O75154 756 aa10.11□□□□□ -0.79
PCM1-212ENST00000519253 PLPPR3Q6T4P5 718 aa10.11□□□□□ -0.79
PCM1-212ENST00000519253 ZGPATQ8N5A5 531 aaKnown RBP10.11□□□□□ -0.79
PCM1-212ENST00000519253 CAVIN2O95810 425 aa10.11□□□□□ -0.79
PCM1-212ENST00000519253 ARHGEF5Q12774 1597 aa10.11□□□□□ -0.79
PCM1-212ENST00000519253 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.11□□□□□ -0.79
PCM1-212ENST00000519253 PDE1AP54750 535 aa10.11□□□□□ -0.79
PCM1-212ENST00000519253 RTEL1-TNFRSF6BF6WH68 1400 aa10.11□□□□□ -0.79
PCM1-212ENST00000519253 JAKMIP1Q96N16 626 aaKnown RBP10.1□□□□□ -0.79
PCM1-212ENST00000519253 MYRIPQ8NFW9 859 aa10.1□□□□□ -0.79
PCM1-212ENST00000519253 DDX58O95786 925 aaKnown RBP10.1□□□□□ -0.79
PCM1-212ENST00000519253 NEXNQ0ZGT2 675 aa10.1□□□□□ -0.79
PCM1-212ENST00000519253 ESYT1Q9BSJ8 1104 aa10.1□□□□□ -0.79
PCM1-212ENST00000519253 DDX19AQ9NUU7 478 aaKnown RBP10.1□□□□□ -0.79
PCM1-212ENST00000519253 CFAP45Q9UL16 551 aa10.1□□□□□ -0.79
PCM1-212ENST00000519253 SYNMO15061 1565 aa10.1□□□□□ -0.79
PCM1-212ENST00000519253 ZSCAN22P10073 491 aaPredicted RBP10.1□□□□□ -0.79
PCM1-212ENST00000519253 USP48Q86UV5 1035 aa10.1□□□□□ -0.79
PCM1-212ENST00000519253 ZNF396Q96N95 335 aaPredicted RBP10.1□□□□□ -0.79
PCM1-212ENST00000519253 CWC15Q9P013 229 aaKnown RBP10.1□□□□□ -0.79
PCM1-212ENST00000519253 PAXBP1Q9Y5B6 917 aa10.1□□□□□ -0.79
PCM1-212ENST00000519253 PTPRTO14522 1441 aa10.1□□□□□ -0.79
PCM1-212ENST00000519253 FSD1Q9BTV5 496 aa10.1□□□□□ -0.79
PCM1-212ENST00000519253 TNNT1P13805 278 aa10.09□□□□□ -0.79
PCM1-212ENST00000519253 LRRFIP1Q32MZ4 808 aaKnown RBP10.09□□□□□ -0.79
PCM1-212ENST00000519253 BLOC1S2Q6QNY1 142 aa10.09□□□□□ -0.79
PCM1-212ENST00000519253 PIBF1Q8WXW3 757 aa10.09□□□□□ -0.79
PCM1-212ENST00000519253 KIF1BPQ96EK5 621 aa10.09□□□□□ -0.79
PCM1-212ENST00000519253 LTV1Q96GA3 475 aaPredicted RBP10.09□□□□□ -0.79
PCM1-212ENST00000519253 TRIM35Q9UPQ4 493 aa10.09□□□□□ -0.79
PCM1-212ENST00000519253 CASTP20810 708 aaKnown RBP10.09□□□□□ -0.79
PCM1-212ENST00000519253 CPLX2Q6PUV4 134 aaKnown RBP10.09□□□□□ -0.79
PCM1-212ENST00000519253 IL1RAPL2Q9NP60 686 aa10.09□□□□□ -0.79
PCM1-212ENST00000519253 GLRX3O76003 335 aaKnown RBP10.09□□□□□ -0.79
PCM1-212ENST00000519253 PLEKHG5O94827 1062 aa10.09□□□□□ -0.79
PCM1-212ENST00000519253 PTPN14Q15678 1187 aa10.09□□□□□ -0.79
PCM1-212ENST00000519253 CEP57L1Q8IYX8 460 aa10.09□□□□□ -0.79
PCM1-212ENST00000519253 ABCC10Q5T3U5 1492 aa10.09□□□□□ -0.79
PCM1-212ENST00000519253 NUTM2FA1L443 756 aa10.09□□□□□ -0.79
PCM1-212ENST00000519253 TTC12Q9H892 705 aaPredicted RBP10.09□□□□□ -0.79
PCM1-212ENST00000519253 CCAR2Q8N163 923 aaKnown RBP10.09□□□□□ -0.79
PCM1-212ENST00000519253 KIF20AO95235 890 aa10.08□□□□□ -0.8
PCM1-212ENST00000519253 FEZ1Q99689 392 aa10.08□□□□□ -0.8
PCM1-212ENST00000519253 MAST1Q9Y2H9 1570 aa10.08□□□□□ -0.8
PCM1-212ENST00000519253 CWC27Q6UX04 472 aaKnown RBP10.08□□□□□ -0.8
PCM1-212ENST00000519253 CCDC83Q8IWF9 413 aa10.08□□□□□ -0.8
PCM1-212ENST00000519253 FAM200AQ8TCP9 573 aa10.08□□□□□ -0.8
PCM1-212ENST00000519253 GORABQ5T7V8 394 aa10.08□□□□□ -0.8
PCM1-212ENST00000519253 HDGFL1Q5TGJ6 251 aa10.08□□□□□ -0.8
PCM1-212ENST00000519253 KIF18AQ8NI77 898 aa10.08□□□□□ -0.8
PCM1-212ENST00000519253 EMILIN1Q9Y6C2 1016 aa10.08□□□□□ -0.8
PCM1-212ENST00000519253 SRGAP3O43295 1099 aa10.08□□□□□ -0.8
PCM1-212ENST00000519253 DCTN1Q14203 1278 aa10.08□□□□□ -0.8
PCM1-212ENST00000519253 CPLX1O14810 134 aa10.08□□□□□ -0.8
PCM1-212ENST00000519253 LMOD2Q6P5Q4 547 aa10.08□□□□□ -0.8
PCM1-212ENST00000519253 ZNF830Q96NB3 372 aaPredicted RBP10.08□□□□□ -0.8
PCM1-212ENST00000519253 HOOK1Q9UJC3 728 aaKnown RBP10.08□□□□□ -0.8
PCM1-212ENST00000519253 SYNE3Q6ZMZ3 975 aa10.08□□□□□ -0.8
PCM1-212ENST00000519253 CLASP1Q7Z460 1538 aa10.07□□□□□ -0.8
PCM1-212ENST00000519253 KRT32Q14532 448 aa10.07□□□□□ -0.8
PCM1-212ENST00000519253 NOM1Q5C9Z4 860 aaKnown RBP10.07□□□□□ -0.8
PCM1-212ENST00000519253 CEP85Q6P2H3 762 aa10.07□□□□□ -0.8
PCM1-212ENST00000519253 C16orf71Q8IYS4 520 aaPredicted RBP10.07□□□□□ -0.8
PCM1-212ENST00000519253 CCDC61Q9Y6R9 512 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms