RNA–Protein interactions for RNA: ENST00000518149.5

NKX2-1-203, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-1, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-203ENST00000518149 PLEKHG5O94827 1062 aa23.41■■□□□ 1.34
NKX2-1-203ENST00000518149 DDX19BQ9UMR2 479 aa23.41■■□□□ 1.34
NKX2-1-203ENST00000518149 ZSCAN30Q86W11 494 aa23.4■■□□□ 1.34
NKX2-1-203ENST00000518149 ITPRIPQ8IWB1 547 aa23.4■■□□□ 1.34
NKX2-1-203ENST00000518149 SMC4Q9NTJ3 1288 aa23.39■■□□□ 1.34
NKX2-1-203ENST00000518149 CT47B1P0C2W7 299 aaPredicted RBP23.39■■□□□ 1.33
NKX2-1-203ENST00000518149 NASPP49321 788 aaPredicted RBP23.39■■□□□ 1.33
NKX2-1-203ENST00000518149 BRINP3Q76B58 766 aa23.39■■□□□ 1.33
NKX2-1-203ENST00000518149 SOX12O15370 315 aa23.38■■□□□ 1.33
NKX2-1-203ENST00000518149 SSH2Q76I76 1423 aa23.38■■□□□ 1.33
NKX2-1-203ENST00000518149 NRKQ7Z2Y5 1582 aa23.38■■□□□ 1.33
NKX2-1-203ENST00000518149 TRIM27P14373 513 aa23.38■■□□□ 1.33
NKX2-1-203ENST00000518149 ANP32BQ92688 251 aaKnown RBP23.38■■□□□ 1.33
NKX2-1-203ENST00000518149 NCBP3Q53F19 620 aaKnown RBP23.37■■□□□ 1.33
NKX2-1-203ENST00000518149 OFD1O75665 1012 aa23.37■■□□□ 1.33
NKX2-1-203ENST00000518149 KIF20BQ96Q89 1820 aa23.36■■□□□ 1.33
NKX2-1-203ENST00000518149 U2SURPO15042 1029 aaKnown RBP23.35■■□□□ 1.33
NKX2-1-203ENST00000518149 LMOD2Q6P5Q4 547 aa23.35■■□□□ 1.33
NKX2-1-203ENST00000518149 ABTB2Q8N961 1025 aa23.35■■□□□ 1.33
NKX2-1-203ENST00000518149 GOLGA6L22H0YM25 854 aa23.34■■□□□ 1.33
NKX2-1-203ENST00000518149 MSNP26038 577 aaKnown RBP23.34■■□□□ 1.33
NKX2-1-203ENST00000518149 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.34■■□□□ 1.33
NKX2-1-203ENST00000518149 KRT28Q7Z3Y7 464 aa23.34■■□□□ 1.33
NKX2-1-203ENST00000518149 FOXD4L1Q9NU39 408 aa23.34■■□□□ 1.33
NKX2-1-203ENST00000518149 ATF7IPQ6VMQ6 1270 aa23.34■■□□□ 1.33
NKX2-1-203ENST00000518149 TSR2Q969E8 191 aaKnown RBP23.34■■□□□ 1.33
NKX2-1-203ENST00000518149 COG3Q96JB2 828 aa23.34■■□□□ 1.33
NKX2-1-203ENST00000518149 NUCB1Q02818 461 aa23.33■■□□□ 1.33
NKX2-1-203ENST00000518149 KIF2CQ99661 725 aa23.33■■□□□ 1.32
NKX2-1-203ENST00000518149 IBTKQ9P2D0 1353 aaPredicted RBP23.32■■□□□ 1.32
NKX2-1-203ENST00000518149 NLRP6P59044 892 aa23.32■■□□□ 1.32
NKX2-1-203ENST00000518149 K7ELQ4 463 aaPredicted RBP23.32■■□□□ 1.32
NKX2-1-203ENST00000518149 EXOSC9Q06265 439 aaKnown RBP23.32■■□□□ 1.32
NKX2-1-203ENST00000518149 TERF1P54274 439 aa23.31■■□□□ 1.32
NKX2-1-203ENST00000518149 SSH1Q8WYL5 1049 aa23.31■■□□□ 1.32
NKX2-1-203ENST00000518149 LNPKQ9C0E8 428 aa23.31■■□□□ 1.32
NKX2-1-203ENST00000518149 SSFA2P28290 1259 aa23.31■■□□□ 1.32
NKX2-1-203ENST00000518149 CD2BP2O95400 341 aaKnown RBP23.3■■□□□ 1.32
NKX2-1-203ENST00000518149 KLHL40Q2TBA0 621 aa23.3■■□□□ 1.32
NKX2-1-203ENST00000518149 ZBTB40Q9NUA8 1239 aa23.3■■□□□ 1.32
NKX2-1-203ENST00000518149 TMEM57Q8N5G2 664 aa23.3■■□□□ 1.32
NKX2-1-203ENST00000518149 DDX49Q9Y6V7 483 aaKnown RBP23.3■■□□□ 1.32
NKX2-1-203ENST00000518149 PIK3C2AO00443 1686 aa23.3■■□□□ 1.32
NKX2-1-203ENST00000518149 TTC21AQ8NDW8 1320 aa23.29■■□□□ 1.32
NKX2-1-203ENST00000518149 RRS1Q15050 365 aaKnown RBP23.29■■□□□ 1.32
NKX2-1-203ENST00000518149 CALD1Q05682 793 aaKnown RBP23.29■■□□□ 1.32
NKX2-1-203ENST00000518149 BMP2KLQ5H9B9 411 aa23.29■■□□□ 1.32
NKX2-1-203ENST00000518149 NOB1Q9ULX3 412 aaKnown RBP23.29■■□□□ 1.32
NKX2-1-203ENST00000518149 CLEC17AQ6ZS10 378 aa23.28■■□□□ 1.32
NKX2-1-203ENST00000518149 CHD1LQ86WJ1 897 aa23.28■■□□□ 1.32
NKX2-1-203ENST00000518149 KIF1AQ12756 1690 aa23.28■■□□□ 1.32
NKX2-1-203ENST00000518149 RIPK4P57078 832 aa23.28■■□□□ 1.32
NKX2-1-203ENST00000518149 ANKRD26Q9UPS8 1709 aa23.28■■□□□ 1.32
NKX2-1-203ENST00000518149 PIP4K2BP78356 416 aa23.27■■□□□ 1.32
NKX2-1-203ENST00000518149 NPHP3Q7Z494 1330 aa23.27■■□□□ 1.32
NKX2-1-203ENST00000518149 OVOS2A0A0J9YW53 1432 aa23.26■■□□□ 1.31
NKX2-1-203ENST00000518149 OVOS2Q6IE36 1432 aa23.26■■□□□ 1.31
NKX2-1-203ENST00000518149 EMILIN1Q9Y6C2 1016 aa23.26■■□□□ 1.31
NKX2-1-203ENST00000518149 BAG4O95429 457 aaKnown RBP23.26■■□□□ 1.31
NKX2-1-203ENST00000518149 RBM10P98175 930 aaKnown RBP23.26■■□□□ 1.31
NKX2-1-203ENST00000518149 GAS2L2Q8NHY3 880 aa23.25■■□□□ 1.31
NKX2-1-203ENST00000518149 TMPOP42166 694 aaKnown RBP23.24■■□□□ 1.31
NKX2-1-203ENST00000518149 HS1BP3Q53T59 392 aa23.24■■□□□ 1.31
NKX2-1-203ENST00000518149 POLKQ9UBT6 870 aa23.24■■□□□ 1.31
NKX2-1-203ENST00000518149 ZNF445P59923 1031 aa23.23■■□□□ 1.31
NKX2-1-203ENST00000518149 MAP7D2Q96T17 732 aa23.23■■□□□ 1.31
NKX2-1-203ENST00000518149 RBM42Q9BTD8 480 aaKnown RBP23.23■■□□□ 1.31
NKX2-1-203ENST00000518149 R3HCC1Q9Y3T6 440 aaKnown RBP23.22■■□□□ 1.31
NKX2-1-203ENST00000518149 TRPM3Q9HCF6 1732 aaPredicted RBP23.22■■□□□ 1.31
NKX2-1-203ENST00000518149 PXDNQ92626 1479 aa23.22■■□□□ 1.31
NKX2-1-203ENST00000518149 KIF16BQ96L93 1317 aa23.21■■□□□ 1.31
NKX2-1-203ENST00000518149 UBAP1LF5GYI3 381 aa23.21■■□□□ 1.31
NKX2-1-203ENST00000518149 IPO8O15397 1037 aaKnown RBP23.21■■□□□ 1.31
NKX2-1-203ENST00000518149 MAP2P11137 1827 aaKnown RBP23.21■■□□□ 1.31
NKX2-1-203ENST00000518149 PLEKHF1Q96S99 279 aa23.21■■□□□ 1.31
NKX2-1-203ENST00000518149 DIAPH1O60610 1272 aaKnown RBP23.2■■□□□ 1.3
NKX2-1-203ENST00000518149 TBC1D9Q6ZT07 1266 aa23.2■■□□□ 1.3
NKX2-1-203ENST00000518149 CABLES1Q8TDN4 633 aa23.2■■□□□ 1.3
NKX2-1-203ENST00000518149 ROBO1Q9Y6N7 1651 aa23.2■■□□□ 1.3
NKX2-1-203ENST00000518149 AK9Q5TCS8 1911 aa23.2■■□□□ 1.3
NKX2-1-203ENST00000518149 FAM13BQ9NYF5 915 aa23.19■■□□□ 1.3
NKX2-1-203ENST00000518149 NOL7Q9UMY1 257 aaKnown RBP23.19■■□□□ 1.3
NKX2-1-203ENST00000518149 MARF1Q9Y4F3 1742 aaKnown RBP23.19■■□□□ 1.3
NKX2-1-203ENST00000518149 USP31Q70CQ4 1352 aa23.19■■□□□ 1.3
NKX2-1-203ENST00000518149 ZNF500O60304 480 aaPredicted RBP23.18■■□□□ 1.3
NKX2-1-203ENST00000518149 ANKRD45Q5TZF3 282 aa23.18■■□□□ 1.3
NKX2-1-203ENST00000518149 CERKQ8TCT0 537 aa23.18■■□□□ 1.3
NKX2-1-203ENST00000518149 ZBTB7CA1YPR0 619 aa23.18■■□□□ 1.3
NKX2-1-203ENST00000518149 TOM1O60784 492 aa23.18■■□□□ 1.3
NKX2-1-203ENST00000518149 TRIM35Q9UPQ4 493 aa23.18■■□□□ 1.3
NKX2-1-203ENST00000518149 MCTP1Q6DN14 999 aa23.17■■□□□ 1.3
NKX2-1-203ENST00000518149 ZSCAN23Q3MJ62 389 aa23.17■■□□□ 1.3
NKX2-1-203ENST00000518149 CAVIN1Q6NZI2 390 aaKnown RBP23.17■■□□□ 1.3
NKX2-1-203ENST00000518149 SOS2Q07890 1332 aaPredicted RBP23.17■■□□□ 1.3
NKX2-1-203ENST00000518149 NCLP19338 710 aaKnown RBP23.16■■□□□ 1.3
NKX2-1-203ENST00000518149 IL16Q14005 1332 aa23.16■■□□□ 1.3
NKX2-1-203ENST00000518149 SPATA31A3Q5VYP0 1347 aa23.16■■□□□ 1.3
NKX2-1-203ENST00000518149 GCC1Q96CN9 775 aa23.15■■□□□ 1.3
NKX2-1-203ENST00000518149 PDLIM2Q96JY6 352 aa23.15■■□□□ 1.3
NKX2-1-203ENST00000518149 PRDM4Q9UKN5 801 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms