RNA–Protein interactions for RNA: ENST00000511600.5

RNF4-214, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF4, Length 4,123 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-214ENST00000511600 IVLP07476 585 aa8.24□□□□□ -1.09
RNF4-214ENST00000511600 MNAT1P51948 309 aa8.24□□□□□ -1.09
RNF4-214ENST00000511600 MPNDQ8N594 471 aa8.24□□□□□ -1.09
RNF4-214ENST00000511600 CLTCL1P53675 1640 aa8.24□□□□□ -1.09
RNF4-214ENST00000511600 ZMYM4Q5VZL5 1548 aa8.24□□□□□ -1.09
RNF4-214ENST00000511600 CCDC172P0C7W6 258 aa8.23□□□□□ -1.09
RNF4-214ENST00000511600 GNL2Q13823 731 aaKnown RBP8.23□□□□□ -1.09
RNF4-214ENST00000511600 ZNF397Q8NF99 534 aaPredicted RBP8.23□□□□□ -1.09
RNF4-214ENST00000511600 CLUAP1Q96AJ1 413 aa8.23□□□□□ -1.09
RNF4-214ENST00000511600 KIDINS220Q9ULH0 1771 aa8.23□□□□□ -1.09
RNF4-214ENST00000511600 ARID4AP29374 1257 aaPredicted RBP8.23□□□□□ -1.09
RNF4-214ENST00000511600 MAP2K2P36507 400 aa8.23□□□□□ -1.09
RNF4-214ENST00000511600 TMCO3Q6UWJ1 677 aa8.23□□□□□ -1.09
RNF4-214ENST00000511600 ZBTB9Q96C00 473 aa8.23□□□□□ -1.09
RNF4-214ENST00000511600 IQGAP1P46940 1657 aa8.23□□□□□ -1.09
RNF4-214ENST00000511600 PAXBP1Q9Y5B6 917 aa8.22□□□□□ -1.09
RNF4-214ENST00000511600 SYCE3A1L190 88 aa8.22□□□□□ -1.09
RNF4-214ENST00000511600 TPM1P09493 284 aa8.22□□□□□ -1.09
RNF4-214ENST00000511600 CASQ1P31415 396 aa8.22□□□□□ -1.09
RNF4-214ENST00000511600 SATB1Q01826 763 aa8.22□□□□□ -1.09
RNF4-214ENST00000511600 K7ELQ4 463 aaPredicted RBP8.22□□□□□ -1.09
RNF4-214ENST00000511600 KIF1CO43896 1103 aaKnown RBP8.22□□□□□ -1.09
RNF4-214ENST00000511600 ZNF853P0CG23 659 aa8.22□□□□□ -1.09
RNF4-214ENST00000511600 TTLL5Q6EMB2 1281 aa8.22□□□□□ -1.09
RNF4-214ENST00000511600 PANK3Q9H999 370 aa8.22□□□□□ -1.09
RNF4-214ENST00000511600 PIBF1Q8WXW3 757 aa8.22□□□□□ -1.09
RNF4-214ENST00000511600 YEATS2Q9ULM3 1422 aa8.21□□□□□ -1.09
RNF4-214ENST00000511600 KIF2AO00139 706 aaPredicted RBP8.21□□□□□ -1.09
RNF4-214ENST00000511600 POLR3GO15318 223 aaPredicted RBP8.21□□□□□ -1.09
RNF4-214ENST00000511600 ZSCAN23Q3MJ62 389 aa8.21□□□□□ -1.09
RNF4-214ENST00000511600 ZBTB12Q9Y330 459 aaPredicted RBP8.21□□□□□ -1.09
RNF4-214ENST00000511600 RPGRIP1LQ68CZ1 1315 aa8.21□□□□□ -1.09
RNF4-214ENST00000511600 MAP3K4Q9Y6R4 1608 aa8.21□□□□□ -1.09
RNF4-214ENST00000511600 SYNMO15061 1565 aa8.21□□□□□ -1.1
RNF4-214ENST00000511600 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.21□□□□□ -1.1
RNF4-214ENST00000511600 MROH1Q8NDA8 1641 aa8.21□□□□□ -1.1
RNF4-214ENST00000511600 ZC3H13Q5T200 1668 aaKnown RBP8.21□□□□□ -1.1
RNF4-214ENST00000511600 FAM177BA6PVY3 158 aa8.21□□□□□ -1.1
RNF4-214ENST00000511600 NPHP1O15259 732 aa8.21□□□□□ -1.1
RNF4-214ENST00000511600 UVSSAQ2YD98 709 aa8.21□□□□□ -1.1
RNF4-214ENST00000511600 FOXD4L5Q5VV16 416 aaPredicted RBP8.21□□□□□ -1.1
RNF4-214ENST00000511600 ANKLE2Q86XL3 938 aa8.21□□□□□ -1.1
RNF4-214ENST00000511600 THEMISQ8N1K5 641 aaPredicted RBP8.21□□□□□ -1.1
RNF4-214ENST00000511600 FOXD4L4Q8WXT5 416 aaPredicted RBP8.21□□□□□ -1.1
RNF4-214ENST00000511600 DDX11Q96FC9 970 aa8.21□□□□□ -1.1
RNF4-214ENST00000511600 PARD3Q8TEW0 1356 aa8.21□□□□□ -1.1
RNF4-214ENST00000511600 RPAINQ86UA6 219 aa8.2□□□□□ -1.1
RNF4-214ENST00000511600 CDCA7LQ96GN5 454 aa8.2□□□□□ -1.1
RNF4-214ENST00000511600 CWC22Q9HCG8 908 aaKnown RBP8.2□□□□□ -1.1
RNF4-214ENST00000511600 RNF216Q9NWF9 866 aaPredicted RBP8.2□□□□□ -1.1
RNF4-214ENST00000511600 COG6Q9Y2V7 657 aa8.2□□□□□ -1.1
RNF4-214ENST00000511600 EID1Q9Y6B2 187 aa8.2□□□□□ -1.1
RNF4-214ENST00000511600 ATP2B3Q16720 1220 aa8.2□□□□□ -1.1
RNF4-214ENST00000511600 LRSAM1Q6UWE0 723 aa8.2□□□□□ -1.1
RNF4-214ENST00000511600 TSC1Q92574 1164 aa8.2□□□□□ -1.1
RNF4-214ENST00000511600 LRRFIP2Q9Y608 721 aaKnown RBP8.2□□□□□ -1.1
RNF4-214ENST00000511600 ATP6V1DQ9Y5K8 247 aa8.2□□□□□ -1.1
RNF4-214ENST00000511600 FILIP1Q7Z7B0 1213 aa8.19□□□□□ -1.1
RNF4-214ENST00000511600 RTF1Q92541 710 aaKnown RBP8.19□□□□□ -1.1
RNF4-214ENST00000511600 V9GYY5 206 aaPredicted RBP8.19□□□□□ -1.1
RNF4-214ENST00000511600 GOLGA6L19H0YKK7 550 aa8.19□□□□□ -1.1
RNF4-214ENST00000511600 ZNF445P59923 1031 aa8.19□□□□□ -1.1
RNF4-214ENST00000511600 KRBA2Q6ZNG9 492 aa8.19□□□□□ -1.1
RNF4-214ENST00000511600 HOMER1Q86YM7 354 aa8.19□□□□□ -1.1
RNF4-214ENST00000511600 SPC24Q8NBT2 197 aa8.19□□□□□ -1.1
RNF4-214ENST00000511600 PPM1EQ8WY54 764 aa8.19□□□□□ -1.1
RNF4-214ENST00000511600 JRKLQ9Y4A0 524 aa8.19□□□□□ -1.1
RNF4-214ENST00000511600 SMTNL1A8MU46 457 aa8.19□□□□□ -1.1
RNF4-214ENST00000511600 RIOK3O14730 519 aaKnown RBP8.19□□□□□ -1.1
RNF4-214ENST00000511600 BAG4O95429 457 aaKnown RBP8.19□□□□□ -1.1
RNF4-214ENST00000511600 KDM5AP29375 1690 aaKnown RBP8.19□□□□□ -1.1
RNF4-214ENST00000511600 PPRC1Q5VV67 1664 aaKnown RBP8.19□□□□□ -1.1
RNF4-214ENST00000511600 PES1O00541 588 aaKnown RBP8.18□□□□□ -1.1
RNF4-214ENST00000511600 EIF3JO75822 258 aaKnown RBP8.18□□□□□ -1.1
RNF4-214ENST00000511600 TERF2Q15554 542 aa8.18□□□□□ -1.1
RNF4-214ENST00000511600 CHMP4CQ96CF2 233 aa8.18□□□□□ -1.1
RNF4-214ENST00000511600 SETBP1Q9Y6X0 1596 aa8.18□□□□□ -1.1
RNF4-214ENST00000511600 LRPPRCP42704 1394 aaKnown RBP8.18□□□□□ -1.1
RNF4-214ENST00000511600 GAS2L3Q86XJ1 694 aa8.18□□□□□ -1.1
RNF4-214ENST00000511600 TESK2Q96S53 571 aa8.18□□□□□ -1.1
RNF4-214ENST00000511600 ADGRB3O60242 1522 aa8.18□□□□□ -1.1
RNF4-214ENST00000511600 SETSIPP0DME0 302 aa8.18□□□□□ -1.1
RNF4-214ENST00000511600 NF2P35240 595 aa8.18□□□□□ -1.1
RNF4-214ENST00000511600 LMAN1P49257 510 aa8.18□□□□□ -1.1
RNF4-214ENST00000511600 UBXN4Q92575 508 aa8.18□□□□□ -1.1
RNF4-214ENST00000511600 PDZRN3Q9UPQ7 1066 aa8.18□□□□□ -1.1
RNF4-214ENST00000511600 IFT172Q9UG01 1749 aa8.18□□□□□ -1.1
RNF4-214ENST00000511600 CHRM1P11229 460 aaPredicted RBP8.18□□□□□ -1.1
RNF4-214ENST00000511600 SSFA2P28290 1259 aa8.18□□□□□ -1.1
RNF4-214ENST00000511600 CPSF2Q9P2I0 782 aaKnown RBP8.18□□□□□ -1.1
RNF4-214ENST00000511600 NPC1L1Q9UHC9 1359 aa8.17□□□□□ -1.1
RNF4-214ENST00000511600 SOCS7O14512 581 aa8.17□□□□□ -1.1
RNF4-214ENST00000511600 CDR1P51861 262 aa8.17□□□□□ -1.1
RNF4-214ENST00000511600 RAB3GAP1Q15042 981 aa8.17□□□□□ -1.1
RNF4-214ENST00000511600 C16orf45Q96MC5 204 aaPredicted RBP8.17□□□□□ -1.1
RNF4-214ENST00000511600 USP25Q9UHP3 1055 aa8.17□□□□□ -1.1
RNF4-214ENST00000511600 PRIM1P49642 420 aaKnown RBP8.17□□□□□ -1.1
RNF4-214ENST00000511600 PDE3AQ14432 1141 aa8.17□□□□□ -1.1
RNF4-214ENST00000511600 NUTM2DQ5VT03 806 aaPredicted RBP8.17□□□□□ -1.1
RNF4-214ENST00000511600 GBP6Q6ZN66 633 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms