RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 PRKAR2BP31323 418 aa12.09□□□□□ -0.47
POLR2J3-215ENST00000511313 EYA3Q99504 573 aa12.09□□□□□ -0.47
POLR2J3-215ENST00000511313 NFE2L2Q16236 605 aa12.09□□□□□ -0.47
POLR2J3-215ENST00000511313 KIF7Q2M1P5 1343 aa12.08□□□□□ -0.48
POLR2J3-215ENST00000511313 ADRA2BP18089 450 aa12.08□□□□□ -0.48
POLR2J3-215ENST00000511313 ALKQ9UM73 1620 aa12.08□□□□□ -0.48
POLR2J3-215ENST00000511313 NPC1L1Q9UHC9 1359 aa12.08□□□□□ -0.48
POLR2J3-215ENST00000511313 ATP6V1AP38606 617 aa12.08□□□□□ -0.48
POLR2J3-215ENST00000511313 ILDR1Q86SU0 546 aaPredicted RBP12.08□□□□□ -0.48
POLR2J3-215ENST00000511313 PIK3C2BO00750 1634 aa12.08□□□□□ -0.48
POLR2J3-215ENST00000511313 HYPKQ9NX55 129 aa12.08□□□□□ -0.48
POLR2J3-215ENST00000511313 LMOD1P29536 600 aaPredicted RBP12.07□□□□□ -0.48
POLR2J3-215ENST00000511313 CC2D2BQ6DHV5 1058 aa12.07□□□□□ -0.48
POLR2J3-215ENST00000511313 IGHMBP2P38935 993 aaKnown RBP12.07□□□□□ -0.48
POLR2J3-215ENST00000511313 CWC22Q9HCG8 908 aaKnown RBP12.07□□□□□ -0.48
POLR2J3-215ENST00000511313 TPTE2Q6XPS3 522 aa12.07□□□□□ -0.48
POLR2J3-215ENST00000511313 SETDB2Q96T68 719 aa12.07□□□□□ -0.48
POLR2J3-215ENST00000511313 SETBP1Q9Y6X0 1596 aa12.07□□□□□ -0.48
POLR2J3-215ENST00000511313 NF2P35240 595 aa12.07□□□□□ -0.48
POLR2J3-215ENST00000511313 PARP10Q53GL7 1025 aa12.07□□□□□ -0.48
POLR2J3-215ENST00000511313 TMC4Q7Z404 712 aa12.07□□□□□ -0.48
POLR2J3-215ENST00000511313 HOOK2Q96ED9 719 aa12.07□□□□□ -0.48
POLR2J3-215ENST00000511313 CTDP1Q9Y5B0 961 aaPredicted RBP12.07□□□□□ -0.48
POLR2J3-215ENST00000511313 EIF2S2P20042 333 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-215ENST00000511313 HOXC9P31274 260 aa12.06□□□□□ -0.48
POLR2J3-215ENST00000511313 GPR162Q16538 588 aa12.06□□□□□ -0.48
POLR2J3-215ENST00000511313 KDM5AP29375 1690 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-215ENST00000511313 LARP1Q6PKG0 1096 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-215ENST00000511313 CDC5LQ99459 802 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-215ENST00000511313 SALL2Q9Y467 1007 aaPredicted RBP12.06□□□□□ -0.48
POLR2J3-215ENST00000511313 GNAI3P08754 354 aa12.06□□□□□ -0.48
POLR2J3-215ENST00000511313 JDP2Q8WYK2 163 aa12.06□□□□□ -0.48
POLR2J3-215ENST00000511313 PPRC1Q5VV67 1664 aaKnown RBP12.05□□□□□ -0.48
POLR2J3-215ENST00000511313 NRXN1Q9ULB1 1477 aa12.05□□□□□ -0.48
POLR2J3-215ENST00000511313 ERBB4Q15303 1308 aa12.05□□□□□ -0.48
POLR2J3-215ENST00000511313 INSRP06213 1382 aa12.05□□□□□ -0.48
POLR2J3-215ENST00000511313 PLEKHG2Q9H7P9 1386 aa12.05□□□□□ -0.48
POLR2J3-215ENST00000511313 PPP2R1AP30153 589 aa12.04□□□□□ -0.48
POLR2J3-215ENST00000511313 CABLES1Q8TDN4 633 aa12.04□□□□□ -0.48
POLR2J3-215ENST00000511313 HDAC9Q9UKV0 1011 aa12.04□□□□□ -0.48
POLR2J3-215ENST00000511313 USP6P35125 1406 aa12.04□□□□□ -0.48
POLR2J3-215ENST00000511313 RRS1Q15050 365 aaKnown RBP12.04□□□□□ -0.48
POLR2J3-215ENST00000511313 ARHGEF6Q15052 776 aa12.04□□□□□ -0.48
POLR2J3-215ENST00000511313 HDGFL1Q5TGJ6 251 aa12.04□□□□□ -0.48
POLR2J3-215ENST00000511313 HMOX1P09601 288 aa12.04□□□□□ -0.48
POLR2J3-215ENST00000511313 DPY19L2Q6NUT2 758 aa12.04□□□□□ -0.48
POLR2J3-215ENST00000511313 DDX46Q7L014 1031 aaKnown RBP12.04□□□□□ -0.48
POLR2J3-215ENST00000511313 WDR63Q8IWG1 891 aa12.04□□□□□ -0.48
POLR2J3-215ENST00000511313 ARHGEF25Q86VW2 580 aa12.04□□□□□ -0.48
POLR2J3-215ENST00000511313 VWDEQ8N2E2 1590 aa12.04□□□□□ -0.48
POLR2J3-215ENST00000511313 C3P01024 1663 aa12.03□□□□□ -0.48
POLR2J3-215ENST00000511313 ADAMTS13Q76LX8 1427 aa12.03□□□□□ -0.48
POLR2J3-215ENST00000511313 ERC1Q8IUD2 1116 aa12.03□□□□□ -0.48
POLR2J3-215ENST00000511313 KIAA0232Q92628 1395 aa12.03□□□□□ -0.48
POLR2J3-215ENST00000511313 RRP7AQ9Y3A4 280 aaKnown RBP12.03□□□□□ -0.48
POLR2J3-215ENST00000511313 CRB1P82279 1406 aa12.03□□□□□ -0.48
POLR2J3-215ENST00000511313 BEGAINQ9BUH8 593 aa12.03□□□□□ -0.48
POLR2J3-215ENST00000511313 CNKSR1Q969H4 720 aa12.03□□□□□ -0.48
POLR2J3-215ENST00000511313 LRRC7Q96NW7 1537 aa12.02□□□□□ -0.48
POLR2J3-215ENST00000511313 MPHOSPH8Q99549 860 aa12.02□□□□□ -0.48
POLR2J3-215ENST00000511313 ALDH1B1P30837 517 aa12.02□□□□□ -0.49
POLR2J3-215ENST00000511313 ERICH6Q7L0X2 663 aa12.02□□□□□ -0.49
POLR2J3-215ENST00000511313 FKBP5Q13451 457 aaPredicted RBP12.02□□□□□ -0.49
POLR2J3-215ENST00000511313 PNPLA6Q8IY17 1366 aa12.01□□□□□ -0.49
POLR2J3-215ENST00000511313 G3BP1Q13283 466 aaKnown RBP eCLIP12.01□□□□□ -0.49
POLR2J3-215ENST00000511313 H0YIN7 160 aa12.01□□□□□ -0.49
POLR2J3-215ENST00000511313 HOXB7P09629 217 aa12.01□□□□□ -0.49
POLR2J3-215ENST00000511313 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
POLR2J3-215ENST00000511313 NBPF5PQ86XG9 351 aaPredicted RBP12.01□□□□□ -0.49
POLR2J3-215ENST00000511313 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
POLR2J3-215ENST00000511313 KIF1AQ12756 1690 aa12.01□□□□□ -0.49
POLR2J3-215ENST00000511313 DBF4Q9UBU7 674 aaPredicted RBP12.01□□□□□ -0.49
POLR2J3-215ENST00000511313 USP31Q70CQ4 1352 aa12.01□□□□□ -0.49
POLR2J3-215ENST00000511313 RBM17Q96I25 401 aaKnown RBP12.01□□□□□ -0.49
POLR2J3-215ENST00000511313 FYB1O15117 783 aa12□□□□□ -0.49
POLR2J3-215ENST00000511313 MYO1BO43795 1136 aa12□□□□□ -0.49
POLR2J3-215ENST00000511313 NLRP3Q96P20 1036 aa12□□□□□ -0.49
POLR2J3-215ENST00000511313 ASXL1Q8IXJ9 1541 aa12□□□□□ -0.49
POLR2J3-215ENST00000511313 MCCP23508 829 aa12□□□□□ -0.49
POLR2J3-215ENST00000511313 CCT4P50991 539 aaKnown RBP12□□□□□ -0.49
POLR2J3-215ENST00000511313 NCBP3Q53F19 620 aaKnown RBP12□□□□□ -0.49
POLR2J3-215ENST00000511313 IFT57Q9NWB7 429 aa12□□□□□ -0.49
POLR2J3-215ENST00000511313 EIF6P56537 245 aaKnown RBP11.99□□□□□ -0.49
POLR2J3-215ENST00000511313 CFAP65Q6ZU64 1925 aaKnown RBP11.99□□□□□ -0.49
POLR2J3-215ENST00000511313 MROH1Q8NDA8 1641 aa11.99□□□□□ -0.49
POLR2J3-215ENST00000511313 MAP3K19Q56UN5 1328 aa11.98□□□□□ -0.49
POLR2J3-215ENST00000511313 IL16Q14005 1332 aa11.98□□□□□ -0.49
POLR2J3-215ENST00000511313 CPDO75976 1380 aa11.98□□□□□ -0.49
POLR2J3-215ENST00000511313 PPP4R3BQ5MIZ7 849 aa11.98□□□□□ -0.49
POLR2J3-215ENST00000511313 MFAP1P55081 439 aaKnown RBP11.98□□□□□ -0.49
POLR2J3-215ENST00000511313 FRAT1Q92837 279 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-215ENST00000511313 MST1RQ04912 1400 aa11.98□□□□□ -0.49
POLR2J3-215ENST00000511313 SLC3A2P08195 630 aaKnown RBP11.97□□□□□ -0.49
POLR2J3-215ENST00000511313 CCDC57Q2TAC2 916 aa11.97□□□□□ -0.49
POLR2J3-215ENST00000511313 ZKSCAN2Q63HK3 967 aa11.97□□□□□ -0.49
POLR2J3-215ENST00000511313 SLC4A10Q6U841 1118 aa11.97□□□□□ -0.49
POLR2J3-215ENST00000511313 RWDD1Q9H446 243 aaPredicted RBP11.97□□□□□ -0.49
POLR2J3-215ENST00000511313 PRKRIP1Q9H875 184 aaPredicted RBP11.97□□□□□ -0.49
POLR2J3-215ENST00000511313 CLTCL1P53675 1640 aa11.97□□□□□ -0.49
POLR2J3-215ENST00000511313 A0A1W2PP64 1363 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms