RNA–Protein interactions for RNA: ENST00000510757.1

TRIO-216, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-216ENST00000510757 PARD3Q8TEW0 1356 aa8.93□□□□□ -0.98
TRIO-216ENST00000510757 RGPD3A6NKT7 1758 aaPredicted RBP8.92□□□□□ -0.98
TRIO-216ENST00000510757 RGPD4Q7Z3J3 1758 aa8.92□□□□□ -0.98
TRIO-216ENST00000510757 PPM1GO15355 546 aaPredicted RBP8.92□□□□□ -0.98
TRIO-216ENST00000510757 CYP27B1O15528 508 aa8.92□□□□□ -0.98
TRIO-216ENST00000510757 KCNQ2O43526 872 aa8.92□□□□□ -0.98
TRIO-216ENST00000510757 AEBP1Q8IUX7 1158 aa8.92□□□□□ -0.98
TRIO-216ENST00000510757 A0A0G2JS52 829 aa8.91□□□□□ -0.98
TRIO-216ENST00000510757 PPP2R1AP30153 589 aa8.91□□□□□ -0.98
TRIO-216ENST00000510757 ZEB1P37275 1124 aaPredicted RBP8.91□□□□□ -0.98
TRIO-216ENST00000510757 MYT1Q01538 1121 aa8.91□□□□□ -0.98
TRIO-216ENST00000510757 NUP188Q5SRE5 1749 aa8.91□□□□□ -0.98
TRIO-216ENST00000510757 DOT1LQ8TEK3 1739 aa8.91□□□□□ -0.98
TRIO-216ENST00000510757 BTAF1O14981 1849 aa8.9□□□□□ -0.98
TRIO-216ENST00000510757 EN1Q05925 392 aaPredicted RBP8.9□□□□□ -0.98
TRIO-216ENST00000510757 NKX1-1Q15270 411 aaPredicted RBP8.9□□□□□ -0.98
TRIO-216ENST00000510757 ZCRB1Q8TBF4 217 aaKnown RBP8.9□□□□□ -0.98
TRIO-216ENST00000510757 BCL11BQ9C0K0 894 aaPredicted RBP8.9□□□□□ -0.98
TRIO-216ENST00000510757 ITGB4P16144 1822 aa8.89□□□□□ -0.99
TRIO-216ENST00000510757 PLEKHG2Q9H7P9 1386 aa8.89□□□□□ -0.99
TRIO-216ENST00000510757 PLSCR1O15162 318 aa8.89□□□□□ -0.99
TRIO-216ENST00000510757 DDX10Q13206 875 aaKnown RBP8.89□□□□□ -0.99
TRIO-216ENST00000510757 EZH2Q15910 746 aaKnown RBP8.89□□□□□ -0.99
TRIO-216ENST00000510757 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.89□□□□□ -0.991e-9■■■□□ 19
TRIO-216ENST00000510757 LY75O60449 1722 aa8.88□□□□□ -0.99
TRIO-216ENST00000510757 ADAMTS7Q9UKP4 1686 aa8.88□□□□□ -0.99
TRIO-216ENST00000510757 PAPPAQ13219 1627 aa8.88□□□□□ -0.99
TRIO-216ENST00000510757 APBA3O96018 575 aa8.87□□□□□ -0.99
TRIO-216ENST00000510757 TATP17735 454 aaPredicted RBP8.87□□□□□ -0.99
TRIO-216ENST00000510757 DDX54Q8TDD1 881 aaKnown RBP8.87□□□□□ -0.99
TRIO-216ENST00000510757 ACSBG1Q96GR2 724 aa8.87□□□□□ -0.99
TRIO-216ENST00000510757 KDM6AO15550 1401 aaPredicted RBP8.87□□□□□ -0.99
TRIO-216ENST00000510757 PHKG2P15735 406 aa8.86□□□□□ -0.99
TRIO-216ENST00000510757 PRIM1P49642 420 aaKnown RBP8.86□□□□□ -0.99
TRIO-216ENST00000510757 SULT6B1Q6IMI4 303 aa8.86□□□□□ -0.99
TRIO-216ENST00000510757 RAPGEF4Q8WZA2 1011 aa8.86□□□□□ -0.99
TRIO-216ENST00000510757 VIRMAQ69YN4 1812 aaKnown RBP8.85□□□□□ -0.99
TRIO-216ENST00000510757 DIAPH1O60610 1272 aaKnown RBP8.85□□□□□ -0.99
TRIO-216ENST00000510757 BAG6P46379 1132 aa8.85□□□□□ -0.99
TRIO-216ENST00000510757 CNGB1Q14028 1251 aaPredicted RBP8.85□□□□□ -0.99
TRIO-216ENST00000510757 LRRC4BQ9NT99 713 aa8.85□□□□□ -0.99
TRIO-216ENST00000510757 PCDH11XQ9BZA7 1347 aa8.84□□□□□ -0.99
TRIO-216ENST00000510757 PCDH11YQ9BZA8 1340 aa8.84□□□□□ -0.99
TRIO-216ENST00000510757 SCN11AQ9UI33 1791 aa8.84□□□□□ -0.99
TRIO-216ENST00000510757 KAT6BQ8WYB5 2073 aa8.84□□□□□ -0.99
TRIO-216ENST00000510757 RSPH6AQ9H0K4 717 aa8.84□□□□□ -0.99
TRIO-216ENST00000510757 ANO8Q9HCE9 1232 aaPredicted RBP8.84□□□□□ -0.99
TRIO-216ENST00000510757 ZNF316A6NFI3 1004 aaPredicted RBP8.83□□□□□ -1
TRIO-216ENST00000510757 HMOX1P09601 288 aa8.83□□□□□ -1
TRIO-216ENST00000510757 TXNRD1Q16881 649 aa8.83□□□□□ -1
TRIO-216ENST00000510757 MTHFSDQ2M296 383 aaKnown RBP8.83□□□□□ -1
TRIO-216ENST00000510757 PIGBQ92521 554 aa8.83□□□□□ -1
TRIO-216ENST00000510757 PHACTR3Q96KR7 559 aa8.83□□□□□ -1
TRIO-216ENST00000510757 CASZ1Q86V15 1759 aa8.83□□□□□ -1
TRIO-216ENST00000510757 TAF1LQ8IZX4 1826 aa8.82□□□□□ -1
TRIO-216ENST00000510757 SIPA1L3O60292 1781 aaPredicted RBP8.82□□□□□ -1
TRIO-216ENST00000510757 IFNL2Q8IZJ0 200 aa8.82□□□□□ -1
TRIO-216ENST00000510757 PLEKHF1Q96S99 279 aa8.82□□□□□ -1
TRIO-216ENST00000510757 PDGFDQ9GZP0 370 aaPredicted RBP8.82□□□□□ -1
TRIO-216ENST00000510757 PRKRIP1Q9H875 184 aaPredicted RBP8.82□□□□□ -1
TRIO-216ENST00000510757 SPG7Q9UQ90 795 aa8.82□□□□□ -1
TRIO-216ENST00000510757 MRC1P22897 1456 aa8.82□□□□□ -1
TRIO-216ENST00000510757 TUBGCP6Q96RT7 1819 aa8.82□□□□□ -1
TRIO-216ENST00000510757 SF3B2Q13435 895 aaKnown RBP8.81□□□□□ -1
TRIO-216ENST00000510757 RALBP1Q15311 655 aa8.81□□□□□ -1
TRIO-216ENST00000510757 AMOTQ4VCS5 1084 aa8.81□□□□□ -1
TRIO-216ENST00000510757 SLC4A9Q96Q91 983 aa8.81□□□□□ -1
TRIO-216ENST00000510757 LGR6Q9HBX8 967 aa8.81□□□□□ -1
TRIO-216ENST00000510757 ZNF831Q5JPB2 1677 aa8.81□□□□□ -1
TRIO-216ENST00000510757 COL24A1Q17RW2 1714 aa8.8□□□□□ -1
TRIO-216ENST00000510757 KCNQ4P56696 695 aa8.8□□□□□ -1
TRIO-216ENST00000510757 CCDC184Q52MB2 194 aa8.8□□□□□ -1
TRIO-216ENST00000510757 PLEKHO1Q53GL0 409 aaPredicted RBP8.8□□□□□ -1
TRIO-216ENST00000510757 AMIGO3Q86WK7 504 aa8.8□□□□□ -1
TRIO-216ENST00000510757 AKT1S1Q96B36 256 aa8.8□□□□□ -1
TRIO-216ENST00000510757 ATG3Q9NT62 314 aa8.8□□□□□ -1
TRIO-216ENST00000510757 QSER1Q2KHR3 1735 aa8.8□□□□□ -1
TRIO-216ENST00000510757 CEMIPQ8WUJ3 1361 aa8.79□□□□□ -1
TRIO-216ENST00000510757 PSDA5PKW4 1024 aaPredicted RBP8.79□□□□□ -1
TRIO-216ENST00000510757 ERVV-2B6SEH9 535 aa8.79□□□□□ -1
TRIO-216ENST00000510757 ZNF827Q17R98 1081 aa8.79□□□□□ -1
TRIO-216ENST00000510757 ZNF530Q6P9A1 599 aaPredicted RBP8.79□□□□□ -1
TRIO-216ENST00000510757 MPRIPQ6WCQ1 1025 aa8.79□□□□□ -1
TRIO-216ENST00000510757 IL17REQ8NFR9 667 aa8.79□□□□□ -1
TRIO-216ENST00000510757 DCAF5Q96JK2 942 aa8.79□□□□□ -1
TRIO-216ENST00000510757 ASAP1Q9ULH1 1129 aa8.79□□□□□ -1
TRIO-216ENST00000510757 DLG5Q8TDM6 1919 aa8.79□□□□□ -1
TRIO-216ENST00000510757 CICQ96RK0 1608 aaPredicted RBP8.79□□□□□ -1
TRIO-216ENST00000510757 MYBBP1AQ9BQG0 1328 aaKnown RBP8.79□□□□□ -1
TRIO-216ENST00000510757 C5P01031 1676 aa8.78□□□□□ -1
TRIO-216ENST00000510757 FCHSD2O94868 740 aa8.78□□□□□ -1
TRIO-216ENST00000510757 PRKAR2BP31323 418 aa8.78□□□□□ -1
TRIO-216ENST00000510757 R3HDM1Q15032 1099 aaKnown RBP8.78□□□□□ -1
TRIO-216ENST00000510757 AKAP4Q5JQC9 854 aa8.78□□□□□ -1
TRIO-216ENST00000510757 UBR2Q8IWV8 1755 aa8.78□□□□□ -1
TRIO-216ENST00000510757 COL5A3P25940 1745 aaPredicted RBP8.77□□□□□ -1
TRIO-216ENST00000510757 MYH14Q7Z406 1995 aaKnown RBP8.77□□□□□ -1
TRIO-216ENST00000510757 LRP5O75197 1615 aa8.77□□□□□ -1.01
TRIO-216ENST00000510757 PALLDQ8WX93 1383 aa8.77□□□□□ -1.01
TRIO-216ENST00000510757 KCPQ6ZWJ8 1503 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms