RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 FAM208AQ9UK61 1670 aaKnown RBP13.49□□□□□ -0.25
NEDD9-211ENST00000508546 NLRP2Q9NX02 1062 aa13.48□□□□□ -0.25
NEDD9-211ENST00000508546 SLC27A3Q5K4L6 730 aa13.47□□□□□ -0.25
NEDD9-211ENST00000508546 L3MBTL2Q969R5 705 aa13.47□□□□□ -0.25
NEDD9-211ENST00000508546 MSL1Q68DK7 614 aa13.46□□□□□ -0.25
NEDD9-211ENST00000508546 DOT1LQ8TEK3 1739 aa13.46□□□□□ -0.25
NEDD9-211ENST00000508546 ROCK2O75116 1388 aaKnown RBP13.45□□□□□ -0.26
NEDD9-211ENST00000508546 SBNO2Q9Y2G9 1366 aa13.45□□□□□ -0.26
NEDD9-211ENST00000508546 CD163L1Q9NR16 1453 aa13.45□□□□□ -0.26
NEDD9-211ENST00000508546 TOMM70O94826 608 aa13.45□□□□□ -0.26
NEDD9-211ENST00000508546 KCNQ4P56696 695 aa13.45□□□□□ -0.26
NEDD9-211ENST00000508546 ANKRD24Q8TF21 1146 aa13.45□□□□□ -0.26
NEDD9-211ENST00000508546 TFCP2L1Q9NZI6 479 aa13.45□□□□□ -0.26
NEDD9-211ENST00000508546 WWC3Q9ULE0 1092 aa13.45□□□□□ -0.26
NEDD9-211ENST00000508546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.44□□□□□ -0.26
NEDD9-211ENST00000508546 NME9Q86XW9 330 aa13.43□□□□□ -0.26
NEDD9-211ENST00000508546 EDC4Q6P2E9 1401 aaKnown RBP13.42□□□□□ -0.26
NEDD9-211ENST00000508546 CD2APQ9Y5K6 639 aa13.42□□□□□ -0.26
NEDD9-211ENST00000508546 IGSF1Q8N6C5 1336 aa13.41□□□□□ -0.26
NEDD9-211ENST00000508546 C5P01031 1676 aa13.41□□□□□ -0.26
NEDD9-211ENST00000508546 RGPD2P0DJD1 1756 aa13.41□□□□□ -0.26
NEDD9-211ENST00000508546 COL23A1Q86Y22 540 aaPredicted RBP13.41□□□□□ -0.26
NEDD9-211ENST00000508546 TOGARAM1Q9Y4F4 1720 aa13.4□□□□□ -0.26
NEDD9-211ENST00000508546 DDX54Q8TDD1 881 aaKnown RBP13.4□□□□□ -0.26
NEDD9-211ENST00000508546 IP6K1Q92551 441 aa13.4□□□□□ -0.26
NEDD9-211ENST00000508546 NMRK2Q9NPI5 230 aa13.4□□□□□ -0.26
NEDD9-211ENST00000508546 ANKRD36BQ8N2N9 1353 aa13.4□□□□□ -0.26
NEDD9-211ENST00000508546 HDGFL2Q7Z4V5 671 aaPredicted RBP13.39□□□□□ -0.27
NEDD9-211ENST00000508546 NSD2O96028 1365 aa13.39□□□□□ -0.27
NEDD9-211ENST00000508546 KIAA1551Q9HCM1 1747 aa13.39□□□□□ -0.27
NEDD9-211ENST00000508546 MSH5O43196 834 aa13.38□□□□□ -0.27
NEDD9-211ENST00000508546 PRIM1P49642 420 aaKnown RBP13.38□□□□□ -0.27
NEDD9-211ENST00000508546 TAF1LQ8IZX4 1826 aa13.38□□□□□ -0.27
NEDD9-211ENST00000508546 PKD1L3Q7Z443 1732 aa13.37□□□□□ -0.27
NEDD9-211ENST00000508546 HSPA1AP0DMV8 641 aaKnown RBP13.37□□□□□ -0.27
NEDD9-211ENST00000508546 HSPA1BP0DMV9 641 aaKnown RBP13.37□□□□□ -0.27
NEDD9-211ENST00000508546 RBM46Q8TBY0 533 aaKnown RBP13.37□□□□□ -0.27
NEDD9-211ENST00000508546 SLC12A5Q9H2X9 1139 aa13.37□□□□□ -0.27
NEDD9-211ENST00000508546 TERF2IPQ9NYB0 399 aa13.37□□□□□ -0.27
NEDD9-211ENST00000508546 A0A1W2PP64 1363 aa13.36□□□□□ -0.27
NEDD9-211ENST00000508546 TMC1Q8TDI8 760 aa13.36□□□□□ -0.27
NEDD9-211ENST00000508546 SYTL4Q96C24 671 aaPredicted RBP13.36□□□□□ -0.27
NEDD9-211ENST00000508546 PUS7Q96PZ0 661 aaKnown RBP13.36□□□□□ -0.27
NEDD9-211ENST00000508546 SIN3AQ96ST3 1273 aa13.36□□□□□ -0.27
NEDD9-211ENST00000508546 PCDH10Q9P2E7 1040 aa13.36□□□□□ -0.27
NEDD9-211ENST00000508546 CCNL1Q9UK58 526 aaPredicted RBP13.35□□□□□ -0.27
NEDD9-211ENST00000508546 ZCRB1Q8TBF4 217 aaKnown RBP13.34□□□□□ -0.27
NEDD9-211ENST00000508546 LTV1Q96GA3 475 aaPredicted RBP13.34□□□□□ -0.27
NEDD9-211ENST00000508546 MEGF6O75095 1541 aa13.34□□□□□ -0.27
NEDD9-211ENST00000508546 USP47Q96K76 1375 aa13.33□□□□□ -0.27
NEDD9-211ENST00000508546 HMGB2P26583 209 aaKnown RBP13.33□□□□□ -0.28
NEDD9-211ENST00000508546 HOXC9P31274 260 aa13.33□□□□□ -0.28
NEDD9-211ENST00000508546 TNRC6CQ9HCJ0 1690 aaKnown RBP13.33□□□□□ -0.28
NEDD9-211ENST00000508546 MAP3K19Q56UN5 1328 aa13.33□□□□□ -0.28
NEDD9-211ENST00000508546 KIF13BQ9NQT8 1826 aa13.32□□□□□ -0.28
NEDD9-211ENST00000508546 PXDNLA1KZ92 1463 aa13.32□□□□□ -0.28
NEDD9-211ENST00000508546 CARD11Q9BXL7 1154 aa13.32□□□□□ -0.28
NEDD9-211ENST00000508546 CGNL1Q0VF96 1302 aa13.32□□□□□ -0.28
NEDD9-211ENST00000508546 N4BP2Q86UW6 1770 aaPredicted RBP13.32□□□□□ -0.28
NEDD9-211ENST00000508546 ITGB4P16144 1822 aa13.32□□□□□ -0.28
NEDD9-211ENST00000508546 UBR3Q6ZT12 1888 aa13.31□□□□□ -0.28
NEDD9-211ENST00000508546 KCPQ6ZWJ8 1503 aa13.31□□□□□ -0.28
NEDD9-211ENST00000508546 FSTL1Q12841 308 aa13.31□□□□□ -0.28
NEDD9-211ENST00000508546 NEUROD1Q13562 356 aa13.31□□□□□ -0.28
NEDD9-211ENST00000508546 COG3Q96JB2 828 aa13.31□□□□□ -0.28
NEDD9-211ENST00000508546 RTL1A6NKG5 1358 aa13.31□□□□□ -0.28
NEDD9-211ENST00000508546 C10orf71Q711Q0 1435 aa13.3□□□□□ -0.28
NEDD9-211ENST00000508546 C4BP0C0L5 1744 aa13.3□□□□□ -0.28
NEDD9-211ENST00000508546 BRCA1P38398 1863 aaKnown RBP13.3□□□□□ -0.28
NEDD9-211ENST00000508546 AMPHP49418 695 aa13.3□□□□□ -0.28
NEDD9-211ENST00000508546 FLAD1Q8NFF5 587 aa13.3□□□□□ -0.28
NEDD9-211ENST00000508546 AMIGO3Q86WK7 504 aa13.28□□□□□ -0.28
NEDD9-211ENST00000508546 C16orf71Q8IYS4 520 aaPredicted RBP13.28□□□□□ -0.28
NEDD9-211ENST00000508546 NBPF6Q5VWK0 638 aa13.27□□□□□ -0.29
NEDD9-211ENST00000508546 NBPF4Q96M43 638 aa13.27□□□□□ -0.29
NEDD9-211ENST00000508546 PLEKHG2Q9H7P9 1386 aa13.27□□□□□ -0.29
NEDD9-211ENST00000508546 MAP2P11137 1827 aaKnown RBP13.26□□□□□ -0.29
NEDD9-211ENST00000508546 FBLN1P23142 703 aa13.26□□□□□ -0.29
NEDD9-211ENST00000508546 FAM161AQ3B820 660 aa13.26□□□□□ -0.29
NEDD9-211ENST00000508546 PALLDQ8WX93 1383 aa13.26□□□□□ -0.29
NEDD9-211ENST00000508546 RAPGEF4Q8WZA2 1011 aa13.26□□□□□ -0.29
NEDD9-211ENST00000508546 SMG6Q86US8 1419 aaKnown RBP13.25□□□□□ -0.29
NEDD9-211ENST00000508546 PCDH11XQ9BZA7 1347 aa13.25□□□□□ -0.29
NEDD9-211ENST00000508546 PCDH11YQ9BZA8 1340 aa13.25□□□□□ -0.29
NEDD9-211ENST00000508546 ARFGEF1Q9Y6D6 1849 aa13.25□□□□□ -0.29
NEDD9-211ENST00000508546 NSD3Q9BZ95 1437 aa13.24□□□□□ -0.29
NEDD9-211ENST00000508546 SLC24A1O60721 1099 aa13.24□□□□□ -0.29
NEDD9-211ENST00000508546 TATP17735 454 aaPredicted RBP13.24□□□□□ -0.29
NEDD9-211ENST00000508546 TESK2Q96S53 571 aa13.24□□□□□ -0.29
NEDD9-211ENST00000508546 KIF20BQ96Q89 1820 aa13.24□□□□□ -0.29
NEDD9-211ENST00000508546 RRS1Q15050 365 aaKnown RBP13.23□□□□□ -0.29
NEDD9-211ENST00000508546 SMIM5Q71RC9 77 aa13.23□□□□□ -0.29
NEDD9-211ENST00000508546 USHBP1Q8N6Y0 703 aa13.23□□□□□ -0.29
NEDD9-211ENST00000508546 SMARCC1Q92922 1105 aaPredicted RBP13.23□□□□□ -0.29
NEDD9-211ENST00000508546 INSRP06213 1382 aa13.22□□□□□ -0.29
NEDD9-211ENST00000508546 KIF24Q5T7B8 1368 aa13.22□□□□□ -0.29
NEDD9-211ENST00000508546 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
NEDD9-211ENST00000508546 SMC1BQ8NDV3 1235 aa13.22□□□□□ -0.29
NEDD9-211ENST00000508546 AK7Q96M32 723 aa13.22□□□□□ -0.29
NEDD9-211ENST00000508546 BCS1LQ9Y276 419 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms