RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 TTC22Q5TAA0 569 aa18.57■□□□□ 0.56
HERC6-206ENST00000506714 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
HERC6-206ENST00000506714 CEP170BQ9Y4F5 1589 aaPredicted RBP18.57■□□□□ 0.56
HERC6-206ENST00000506714 AK9Q5TCS8 1911 aa18.57■□□□□ 0.56
HERC6-206ENST00000506714 EID1Q9Y6B2 187 aa18.57■□□□□ 0.56
HERC6-206ENST00000506714 PLEKHG1Q9ULL1 1385 aa18.56■□□□□ 0.56
HERC6-206ENST00000506714 BAG4O95429 457 aaKnown RBP18.56■□□□□ 0.56
HERC6-206ENST00000506714 CCDC173Q0VFZ6 552 aa18.56■□□□□ 0.56
HERC6-206ENST00000506714 RPAP2Q8IXW5 612 aaPredicted RBP18.56■□□□□ 0.56
HERC6-206ENST00000506714 MON2Q7Z3U7 1717 aa18.56■□□□□ 0.56
HERC6-206ENST00000506714 TXNDC2Q86VQ3 553 aa18.56■□□□□ 0.56
HERC6-206ENST00000506714 ANP32BQ92688 251 aaKnown RBP18.56■□□□□ 0.56
HERC6-206ENST00000506714 ARHGAP23Q9P227 1491 aa18.55■□□□□ 0.56
HERC6-206ENST00000506714 LTKP29376 864 aa18.55■□□□□ 0.56
HERC6-206ENST00000506714 CASC1Q6TDU7 716 aa18.55■□□□□ 0.56
HERC6-206ENST00000506714 ANKRD44Q8N8A2 993 aa18.55■□□□□ 0.56
HERC6-206ENST00000506714 WAPLQ7Z5K2 1190 aa18.54■□□□□ 0.56
HERC6-206ENST00000506714 THEMISQ8N1K5 641 aaPredicted RBP18.54■□□□□ 0.56
HERC6-206ENST00000506714 COG3Q96JB2 828 aa18.54■□□□□ 0.56
HERC6-206ENST00000506714 USP26Q9BXU7 913 aa18.54■□□□□ 0.56
HERC6-206ENST00000506714 CWC22Q9HCG8 908 aaKnown RBP18.54■□□□□ 0.56
HERC6-206ENST00000506714 DDX49Q9Y6V7 483 aaKnown RBP18.54■□□□□ 0.56
HERC6-206ENST00000506714 WASLO00401 505 aaPredicted RBP18.53■□□□□ 0.56
HERC6-206ENST00000506714 PPP1R9BQ96SB3 815 aa18.53■□□□□ 0.56
HERC6-206ENST00000506714 ADAMTS13Q76LX8 1427 aa18.53■□□□□ 0.56
HERC6-206ENST00000506714 AKAP12Q02952 1782 aa18.53■□□□□ 0.56
HERC6-206ENST00000506714 NME9Q86XW9 330 aa18.52■□□□□ 0.56
HERC6-206ENST00000506714 CPS1P31327 1500 aa18.52■□□□□ 0.56
HERC6-206ENST00000506714 ZNF142P52746 1687 aaPredicted RBP18.52■□□□□ 0.56
HERC6-206ENST00000506714 NASPP49321 788 aaPredicted RBP18.52■□□□□ 0.55
HERC6-206ENST00000506714 ITSN1Q15811 1721 aa18.52■□□□□ 0.55
HERC6-206ENST00000506714 ERBB4Q15303 1308 aa18.51■□□□□ 0.55
HERC6-206ENST00000506714 ATP10DQ9P241 1426 aa18.51■□□□□ 0.55
HERC6-206ENST00000506714 ST18O60284 1047 aa18.51■□□□□ 0.55
HERC6-206ENST00000506714 TECPR2O15040 1411 aa18.5■□□□□ 0.55
HERC6-206ENST00000506714 PTPRCP08575 1304 aa18.5■□□□□ 0.55
HERC6-206ENST00000506714 NRKQ7Z2Y5 1582 aa18.5■□□□□ 0.55
HERC6-206ENST00000506714 KIAA0232Q92628 1395 aa18.5■□□□□ 0.55
HERC6-206ENST00000506714 CYP2E1P05181 493 aaPredicted RBP18.5■□□□□ 0.55
HERC6-206ENST00000506714 ZNF445P59923 1031 aa18.5■□□□□ 0.55
HERC6-206ENST00000506714 SETD1BQ9UPS6 1966 aaKnown RBP18.5■□□□□ 0.55
HERC6-206ENST00000506714 FAM83GA6ND36 823 aa18.49■□□□□ 0.55
HERC6-206ENST00000506714 REC8O95072 547 aa18.49■□□□□ 0.55
HERC6-206ENST00000506714 CEP85Q6P2H3 762 aa18.48■□□□□ 0.55
HERC6-206ENST00000506714 RGS12O14924 1447 aa18.48■□□□□ 0.55
HERC6-206ENST00000506714 GLIPR1L2Q4G1C9 344 aa18.48■□□□□ 0.55
HERC6-206ENST00000506714 CCDC61Q9Y6R9 512 aa18.48■□□□□ 0.55
HERC6-206ENST00000506714 DIP2AQ14689 1571 aa18.47■□□□□ 0.55
HERC6-206ENST00000506714 RRP9O43818 475 aaKnown RBP18.47■□□□□ 0.55
HERC6-206ENST00000506714 SDSP20132 328 aa18.47■□□□□ 0.55
HERC6-206ENST00000506714 NUDT16Q96DE0 195 aaKnown RBP18.47■□□□□ 0.55
HERC6-206ENST00000506714 SLC26A8Q96RN1 970 aa18.47■□□□□ 0.55
HERC6-206ENST00000506714 CHL1O00533 1208 aa18.47■□□□□ 0.55
HERC6-206ENST00000506714 MCTP1Q6DN14 999 aa18.47■□□□□ 0.55
HERC6-206ENST00000506714 C16orf71Q8IYS4 520 aaPredicted RBP18.47■□□□□ 0.55
HERC6-206ENST00000506714 SIRT1Q96EB6 747 aa18.47■□□□□ 0.55
HERC6-206ENST00000506714 RTL1A6NKG5 1358 aa18.46■□□□□ 0.55
HERC6-206ENST00000506714 DCTN1Q14203 1278 aa18.46■□□□□ 0.55
HERC6-206ENST00000506714 RRS1Q15050 365 aaKnown RBP18.46■□□□□ 0.55
HERC6-206ENST00000506714 ZRANB1Q9UGI0 708 aa18.46■□□□□ 0.55
HERC6-206ENST00000506714 HMMRO75330 724 aa18.46■□□□□ 0.54
HERC6-206ENST00000506714 ZSCAN30Q86W11 494 aa18.46■□□□□ 0.54
HERC6-206ENST00000506714 LMBRD1Q9NUN5 540 aa18.46■□□□□ 0.54
HERC6-206ENST00000506714 TPM2P07951 284 aa18.44■□□□□ 0.54
HERC6-206ENST00000506714 HS1BP3Q53T59 392 aa18.44■□□□□ 0.54
HERC6-206ENST00000506714 MSH6P52701 1360 aa18.43■□□□□ 0.54
HERC6-206ENST00000506714 ROBO2Q9HCK4 1378 aa18.43■□□□□ 0.54
HERC6-206ENST00000506714 ERC2O15083 957 aa18.43■□□□□ 0.54
HERC6-206ENST00000506714 HSP90AA2PQ14568 343 aaPredicted RBP18.43■□□□□ 0.54
HERC6-206ENST00000506714 OSBPL3Q9H4L5 887 aa18.43■□□□□ 0.54
HERC6-206ENST00000506714 ZSCAN23Q3MJ62 389 aa18.42■□□□□ 0.54
HERC6-206ENST00000506714 SULT6B1Q6IMI4 303 aa18.42■□□□□ 0.54
HERC6-206ENST00000506714 CAVIN1Q6NZI2 390 aaKnown RBP18.42■□□□□ 0.54
HERC6-206ENST00000506714 OTUD7AQ8TE49 926 aaPredicted RBP18.42■□□□□ 0.54
HERC6-206ENST00000506714 NCLP19338 710 aaKnown RBP18.41■□□□□ 0.54
HERC6-206ENST00000506714 MSNP26038 577 aaKnown RBP18.41■□□□□ 0.54
HERC6-206ENST00000506714 TBX22Q9Y458 520 aa18.41■□□□□ 0.54
HERC6-206ENST00000506714 EIF4A2Q14240 407 aaKnown RBP18.4■□□□□ 0.54
HERC6-206ENST00000506714 PTPRUQ92729 1446 aa18.4■□□□□ 0.54
HERC6-206ENST00000506714 MCM2P49736 904 aa18.4■□□□□ 0.54
HERC6-206ENST00000506714 MEIS3Q99687 375 aa18.4■□□□□ 0.54
HERC6-206ENST00000506714 SMARCA5O60264 1052 aaPredicted RBP18.39■□□□□ 0.54
HERC6-206ENST00000506714 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.39■□□□□ 0.53
HERC6-206ENST00000506714 RGPD1P0DJD0 1748 aa18.39■□□□□ 0.53
HERC6-206ENST00000506714 CCT4P50991 539 aaKnown RBP18.39■□□□□ 0.53
HERC6-206ENST00000506714 KRT24Q2M2I5 525 aa18.38■□□□□ 0.53
HERC6-206ENST00000506714 AEBP1Q8IUX7 1158 aa18.38■□□□□ 0.53
HERC6-206ENST00000506714 XRN1Q8IZH2 1706 aaKnown RBP18.38■□□□□ 0.53
HERC6-206ENST00000506714 PRPF40AO75400 957 aaKnown RBP18.37■□□□□ 0.53
HERC6-206ENST00000506714 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
HERC6-206ENST00000506714 TERF1P54274 439 aa18.37■□□□□ 0.53
HERC6-206ENST00000506714 PDE1AP54750 535 aa18.37■□□□□ 0.53
HERC6-206ENST00000506714 PKP1Q13835 747 aa18.37■□□□□ 0.53
HERC6-206ENST00000506714 ANKLE2Q86XL3 938 aa18.37■□□□□ 0.53
HERC6-206ENST00000506714 ZGPATQ8N5A5 531 aaKnown RBP18.37■□□□□ 0.53
HERC6-206ENST00000506714 AMOTL2Q9Y2J4 779 aa18.37■□□□□ 0.53
HERC6-206ENST00000506714 TUBGCP6Q96RT7 1819 aa18.37■□□□□ 0.53
HERC6-206ENST00000506714 OFD1O75665 1012 aa18.37■□□□□ 0.53
HERC6-206ENST00000506714 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.37■□□□□ 0.53
HERC6-206ENST00000506714 MCM10Q7L590 875 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms