RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 IRF6O14896 467 aa10.97□□□□□ -0.65
HTT-203ENST00000506137 PPP1R12AO14974 1030 aaPredicted RBP10.97□□□□□ -0.65
HTT-203ENST00000506137 SPDYE6P0CI01 402 aa10.97□□□□□ -0.65
HTT-203ENST00000506137 SPDYE2Q495Y8 402 aa10.97□□□□□ -0.65
HTT-203ENST00000506137 ZNF513Q8N8E2 541 aaPredicted RBP10.97□□□□□ -0.65
HTT-203ENST00000506137 POM121Q96HA1 1249 aa10.97□□□□□ -0.65
HTT-203ENST00000506137 GABBR1Q9UBS5 961 aa10.97□□□□□ -0.65
HTT-203ENST00000506137 LRRC7Q96NW7 1537 aa10.97□□□□□ -0.65
HTT-203ENST00000506137 CDK12Q9NYV4 1490 aaPredicted RBP10.96□□□□□ -0.65
HTT-203ENST00000506137 L1TD1Q5T7N2 865 aaKnown RBP10.96□□□□□ -0.65
HTT-203ENST00000506137 RNF187Q5TA31 235 aaPredicted RBP10.96□□□□□ -0.65
HTT-203ENST00000506137 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.65
HTT-203ENST00000506137 POU5F1BQ06416 359 aa10.95□□□□□ -0.66
HTT-203ENST00000506137 LMOD3Q0VAK6 560 aa10.95□□□□□ -0.66
HTT-203ENST00000506137 B4GALNT3Q6L9W6 998 aa10.95□□□□□ -0.66
HTT-203ENST00000506137 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
HTT-203ENST00000506137 AGBL1Q96MI9 1066 aa10.95□□□□□ -0.66
HTT-203ENST00000506137 NCKAP5LQ9HCH0 1330 aa10.94□□□□□ -0.66
HTT-203ENST00000506137 ATG7O95352 703 aa10.94□□□□□ -0.66
HTT-203ENST00000506137 CD53P19397 219 aa10.94□□□□□ -0.66
HTT-203ENST00000506137 EPAS1Q99814 870 aa10.94□□□□□ -0.66
HTT-203ENST00000506137 LNPKQ9C0E8 428 aa10.94□□□□□ -0.66
HTT-203ENST00000506137 VRTNQ9H8Y1 702 aa10.94□□□□□ -0.66
HTT-203ENST00000506137 SPC25Q9HBM1 224 aa10.94□□□□□ -0.66
HTT-203ENST00000506137 CWC25Q9NXE8 425 aaPredicted RBP10.94□□□□□ -0.66
HTT-203ENST00000506137 MAP3K20Q9NYL2 800 aaKnown RBP10.94□□□□□ -0.66
HTT-203ENST00000506137 GOLGA6L3A6NEY3 463 aa10.93□□□□□ -0.66
HTT-203ENST00000506137 STK25O00506 426 aa10.93□□□□□ -0.66
HTT-203ENST00000506137 TNNT2P45379 298 aaPredicted RBP10.93□□□□□ -0.66
HTT-203ENST00000506137 E2F4Q16254 413 aa10.93□□□□□ -0.66
HTT-203ENST00000506137 KLHL10Q6JEL2 608 aa10.93□□□□□ -0.66
HTT-203ENST00000506137 SMAP1Q8IYB5 467 aaPredicted RBP10.93□□□□□ -0.66
HTT-203ENST00000506137 ITFG2Q969R8 447 aa10.93□□□□□ -0.66
HTT-203ENST00000506137 CALR3Q96L12 384 aaKnown RBP10.93□□□□□ -0.66
HTT-203ENST00000506137 FMNL2Q96PY5 1086 aa10.93□□□□□ -0.66
HTT-203ENST00000506137 CDC5LQ99459 802 aaKnown RBP10.93□□□□□ -0.66
HTT-203ENST00000506137 TBC1D2Q9BYX2 928 aa10.93□□□□□ -0.66
HTT-203ENST00000506137 PDCL3Q9H2J4 239 aa10.93□□□□□ -0.66
HTT-203ENST00000506137 TIMM44O43615 452 aa10.92□□□□□ -0.66
HTT-203ENST00000506137 FLT3P36888 993 aa10.92□□□□□ -0.66
HTT-203ENST00000506137 TBX4P57082 545 aa10.92□□□□□ -0.66
HTT-203ENST00000506137 EFCAB2Q5VUJ9 269 aa10.92□□□□□ -0.66
HTT-203ENST00000506137 DNAJC14Q6Y2X3 702 aaPredicted RBP10.92□□□□□ -0.66
HTT-203ENST00000506137 ANKRD13BQ86YJ7 626 aa10.92□□□□□ -0.66
HTT-203ENST00000506137 FAM43AQ8N2R8 423 aa10.92□□□□□ -0.66
HTT-203ENST00000506137 CFAP53Q96M91 514 aa10.92□□□□□ -0.66
HTT-203ENST00000506137 NBPF3Q9H094 633 aa10.92□□□□□ -0.66
HTT-203ENST00000506137 CARMIL2Q6F5E8 1435 aa10.92□□□□□ -0.66
HTT-203ENST00000506137 SMAPO00193 183 aa10.91□□□□□ -0.66
HTT-203ENST00000506137 PRC1O43663 620 aa10.91□□□□□ -0.66
HTT-203ENST00000506137 RASSF7Q02833 373 aa10.91□□□□□ -0.66
HTT-203ENST00000506137 KIAA2012Q0VF49 1180 aa10.91□□□□□ -0.66
HTT-203ENST00000506137 GIPC2Q8TF65 315 aa10.91□□□□□ -0.66
HTT-203ENST00000506137 AKT1S1Q96B36 256 aa10.91□□□□□ -0.66
HTT-203ENST00000506137 KCNH8Q96L42 1107 aa10.91□□□□□ -0.66
HTT-203ENST00000506137 LARP6Q9BRS8 491 aaKnown RBP10.91□□□□□ -0.66
HTT-203ENST00000506137 STAG3Q9UJ98 1225 aa10.91□□□□□ -0.66
HTT-203ENST00000506137 ODF2LQ9ULJ1 636 aa10.91□□□□□ -0.66
HTT-203ENST00000506137 NEO1Q92859 1461 aa10.91□□□□□ -0.66
HTT-203ENST00000506137 COL6A1P12109 1028 aa10.9□□□□□ -0.66
HTT-203ENST00000506137 SAFB2Q14151 953 aaKnown RBP eCLIP10.9□□□□□ -0.66
HTT-203ENST00000506137 MAPRE1Q15691 268 aaKnown RBP10.9□□□□□ -0.66
HTT-203ENST00000506137 ZNF772Q68DY9 489 aaPredicted RBP10.9□□□□□ -0.66
HTT-203ENST00000506137 SUDS3Q9H7L9 328 aaPredicted RBP10.9□□□□□ -0.66
HTT-203ENST00000506137 TCEAL9Q9UHQ7 104 aa10.9□□□□□ -0.66
HTT-203ENST00000506137 NOL7Q9UMY1 257 aaKnown RBP10.9□□□□□ -0.66
HTT-203ENST00000506137 AKAP2Q9Y2D5 859 aa10.9□□□□□ -0.66
HTT-203ENST00000506137 CASQ1P31415 396 aa10.89□□□□□ -0.67
HTT-203ENST00000506137 C1QTNF8P60827 252 aa10.89□□□□□ -0.67
HTT-203ENST00000506137 ZSCAN30Q86W11 494 aa10.89□□□□□ -0.67
HTT-203ENST00000506137 PROCA1Q8NCQ7 364 aaPredicted RBP10.89□□□□□ -0.67
HTT-203ENST00000506137 RNF25Q96BH1 459 aaPredicted RBP10.89□□□□□ -0.67
HTT-203ENST00000506137 RUNDC1Q96C34 613 aa10.89□□□□□ -0.67
HTT-203ENST00000506137 SMC3Q9UQE7 1217 aa10.89□□□□□ -0.67
HTT-203ENST00000506137 C3P01024 1663 aa10.89□□□□□ -0.67
HTT-203ENST00000506137 RXRBP28702 533 aa10.88□□□□□ -0.67
HTT-203ENST00000506137 MARSP56192 900 aaKnown RBP10.88□□□□□ -0.67
HTT-203ENST00000506137 PLEKHG6Q3KR16 790 aa10.88□□□□□ -0.67
HTT-203ENST00000506137 RICTORQ6R327 1708 aa10.88□□□□□ -0.67
HTT-203ENST00000506137 NPAS4Q8IUM7 802 aa10.88□□□□□ -0.67
HTT-203ENST00000506137 PUF60Q9UHX1 559 aaKnown RBP10.88□□□□□ -0.67
HTT-203ENST00000506137 TRAPPC8Q9Y2L5 1435 aa10.88□□□□□ -0.67
HTT-203ENST00000506137 COG6Q9Y2V7 657 aa10.88□□□□□ -0.67
HTT-203ENST00000506137 TBX22Q9Y458 520 aa10.88□□□□□ -0.67
HTT-203ENST00000506137 PLA2R1Q13018 1463 aa10.87□□□□□ -0.67
HTT-203ENST00000506137 SHANK2Q9UPX8 1470 aa10.87□□□□□ -0.67
HTT-203ENST00000506137 KIF20AO95235 890 aa10.87□□□□□ -0.67
HTT-203ENST00000506137 S100BP04271 92 aaPredicted RBP10.87□□□□□ -0.67
HTT-203ENST00000506137 CD151P48509 253 aa10.87□□□□□ -0.67
HTT-203ENST00000506137 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.87□□□□□ -0.67
HTT-203ENST00000506137 OGFOD1Q8N543 542 aa10.87□□□□□ -0.67
HTT-203ENST00000506137 MAP7D2Q96T17 732 aa10.87□□□□□ -0.67
HTT-203ENST00000506137 EFCAB5A4FU69 1503 aa10.87□□□□□ -0.67
HTT-203ENST00000506137 SUPT6HQ7KZ85 1726 aaKnown RBP10.87□□□□□ -0.67
HTT-203ENST00000506137 GIGYF1O75420 1035 aaPredicted RBP10.86□□□□□ -0.67
HTT-203ENST00000506137 ATICP31939 592 aa10.86□□□□□ -0.67
HTT-203ENST00000506137 TDO2P48775 406 aa10.86□□□□□ -0.67
HTT-203ENST00000506137 CCSAPQ6IQ19 270 aaPredicted RBP10.86□□□□□ -0.67
HTT-203ENST00000506137 CCDC73Q6ZRK6 1079 aa10.86□□□□□ -0.67
HTT-203ENST00000506137 VPS37AQ8NEZ2 397 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 195.9 ms