RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 BECN1Q14457 450 aa24.52■■□□□ 1.52
SDHA-206ENST00000505555 RTF1Q92541 710 aaKnown RBP24.52■■□□□ 1.52
SDHA-206ENST00000505555 IGSF1Q8N6C5 1336 aa24.52■■□□□ 1.52
SDHA-206ENST00000505555 GCC1Q96CN9 775 aa24.51■■□□□ 1.51
SDHA-206ENST00000505555 ANKARQ7Z5J8 1434 aa24.51■■□□□ 1.51
SDHA-206ENST00000505555 C14orf37Q86TY3 774 aa24.51■■□□□ 1.51
SDHA-206ENST00000505555 LTV1Q96GA3 475 aaPredicted RBP24.5■■□□□ 1.51
SDHA-206ENST00000505555 FMN2Q9NZ56 1722 aa24.5■■□□□ 1.51
SDHA-206ENST00000505555 KDRP35968 1356 aa24.5■■□□□ 1.51
SDHA-206ENST00000505555 KIAA0232Q92628 1395 aa24.5■■□□□ 1.51
SDHA-206ENST00000505555 HOXC9P31274 260 aa24.5■■□□□ 1.51
SDHA-206ENST00000505555 C22orf23Q9BZE7 217 aa24.49■■□□□ 1.51
SDHA-206ENST00000505555 TSPYL4Q9UJ04 414 aa24.49■■□□□ 1.51
SDHA-206ENST00000505555 INTS3Q68E01 1043 aaKnown RBP24.49■■□□□ 1.51
SDHA-206ENST00000505555 ANKLE2Q86XL3 938 aa24.49■■□□□ 1.51
SDHA-206ENST00000505555 SLC4A2P04920 1241 aa24.47■■□□□ 1.51
SDHA-206ENST00000505555 HAP1P54257 671 aaPredicted RBP24.47■■□□□ 1.51
SDHA-206ENST00000505555 RGS12O14924 1447 aa24.47■■□□□ 1.51
SDHA-206ENST00000505555 TBC1D2Q9BYX2 928 aa24.47■■□□□ 1.51
SDHA-206ENST00000505555 SLKQ9H2G2 1235 aaPredicted RBP24.47■■□□□ 1.51
SDHA-206ENST00000505555 FRAT2O75474 233 aaPredicted RBP24.46■■□□□ 1.51
SDHA-206ENST00000505555 GAS2L2Q8NHY3 880 aa24.46■■□□□ 1.51
SDHA-206ENST00000505555 PHF8Q9UPP1 1060 aa24.46■■□□□ 1.51
SDHA-206ENST00000505555 KIF24Q5T7B8 1368 aa24.44■■□□□ 1.5
SDHA-206ENST00000505555 G2E3Q7L622 706 aa24.43■■□□□ 1.5
SDHA-206ENST00000505555 USHBP1Q8N6Y0 703 aa24.42■■□□□ 1.5
SDHA-206ENST00000505555 BMP2KLQ5H9B9 411 aa24.42■■□□□ 1.5
SDHA-206ENST00000505555 PTPRCP08575 1304 aa24.42■■□□□ 1.5
SDHA-206ENST00000505555 MARF1Q9Y4F3 1742 aaKnown RBP24.41■■□□□ 1.5
SDHA-206ENST00000505555 MSH6P52701 1360 aa24.41■■□□□ 1.5
SDHA-206ENST00000505555 GNAT3A8MTJ3 354 aa24.4■■□□□ 1.5
SDHA-206ENST00000505555 SPRYD3Q8NCJ5 442 aa24.4■■□□□ 1.5
SDHA-206ENST00000505555 MEIS3Q99687 375 aa24.4■■□□□ 1.5
SDHA-206ENST00000505555 ESCO1Q5FWF5 840 aa24.39■■□□□ 1.5
SDHA-206ENST00000505555 F6X3S4 739 aa24.39■■□□□ 1.49
SDHA-206ENST00000505555 DCTPP1Q9H773 170 aa24.39■■□□□ 1.49
SDHA-206ENST00000505555 SLC4A10Q6U841 1118 aa24.38■■□□□ 1.49
SDHA-206ENST00000505555 ANKRD44Q8N8A2 993 aa24.38■■□□□ 1.49
SDHA-206ENST00000505555 IL17REQ8NFR9 667 aa24.38■■□□□ 1.49
SDHA-206ENST00000505555 NWD1Q149M9 1564 aa24.37■■□□□ 1.49
SDHA-206ENST00000505555 NECTIN2Q92692 538 aa24.37■■□□□ 1.49
SDHA-206ENST00000505555 ANTXR1Q9H6X2 564 aa24.37■■□□□ 1.49
SDHA-206ENST00000505555 ZBTB7CA1YPR0 619 aa24.37■■□□□ 1.49
SDHA-206ENST00000505555 PSME1Q06323 249 aa24.37■■□□□ 1.49
SDHA-206ENST00000505555 CEP85Q6P2H3 762 aa24.37■■□□□ 1.49
SDHA-206ENST00000505555 CHD2O14647 1828 aaKnown RBP24.36■■□□□ 1.49
SDHA-206ENST00000505555 HTATSF1O43719 755 aaKnown RBP24.36■■□□□ 1.49
SDHA-206ENST00000505555 PLEKHG5O94827 1062 aa24.36■■□□□ 1.49
SDHA-206ENST00000505555 C16orf71Q8IYS4 520 aaPredicted RBP24.36■■□□□ 1.49
SDHA-206ENST00000505555 ATP10DQ9P241 1426 aa24.36■■□□□ 1.49
SDHA-206ENST00000505555 RTL1A6NKG5 1358 aa24.35■■□□□ 1.49
SDHA-206ENST00000505555 APBB1O00213 710 aa24.34■■□□□ 1.49
SDHA-206ENST00000505555 RPAP2Q8IXW5 612 aaPredicted RBP24.34■■□□□ 1.49
SDHA-206ENST00000505555 TBC1D9Q6ZT07 1266 aa24.33■■□□□ 1.49
SDHA-206ENST00000505555 PLEKHM2Q8IWE5 1019 aa24.33■■□□□ 1.49
SDHA-206ENST00000505555 MAP3K5Q99683 1374 aa24.32■■□□□ 1.48
SDHA-206ENST00000505555 IP6K1Q92551 441 aa24.32■■□□□ 1.48
SDHA-206ENST00000505555 GSPT1P15170 499 aaKnown RBP24.31■■□□□ 1.48
SDHA-206ENST00000505555 RBM25P49756 843 aaKnown RBP24.31■■□□□ 1.48
SDHA-206ENST00000505555 XPCQ01831 940 aaPredicted RBP24.31■■□□□ 1.48
SDHA-206ENST00000505555 STK31Q9BXU1 1019 aa24.31■■□□□ 1.48
SDHA-206ENST00000505555 SMARCA5O60264 1052 aaPredicted RBP24.31■■□□□ 1.48
SDHA-206ENST00000505555 NBPF6Q5VWK0 638 aa24.31■■□□□ 1.48
SDHA-206ENST00000505555 OTUD7AQ8TE49 926 aaPredicted RBP24.31■■□□□ 1.48
SDHA-206ENST00000505555 NBPF4Q96M43 638 aa24.31■■□□□ 1.48
SDHA-206ENST00000505555 GSE1Q14687 1217 aa24.3■■□□□ 1.48
SDHA-206ENST00000505555 ORAI2Q96SN7 254 aa24.3■■□□□ 1.48
SDHA-206ENST00000505555 TAF7Q15545 349 aaPredicted RBP24.3■■□□□ 1.48
SDHA-206ENST00000505555 USP54Q70EL1 1684 aa24.29■■□□□ 1.48
SDHA-206ENST00000505555 ADGRL3Q9HAR2 1447 aa24.29■■□□□ 1.48
SDHA-206ENST00000505555 CCT4P50991 539 aaKnown RBP24.28■■□□□ 1.48
SDHA-206ENST00000505555 CCDC30Q5VVM6 783 aa24.28■■□□□ 1.48
SDHA-206ENST00000505555 FLIIQ13045 1269 aa24.27■■□□□ 1.48
SDHA-206ENST00000505555 FKBP5Q13451 457 aaPredicted RBP24.27■■□□□ 1.48
SDHA-206ENST00000505555 LRRC37A3O60309 1634 aa24.26■■□□□ 1.47
SDHA-206ENST00000505555 LTN1O94822 1766 aa24.26■■□□□ 1.47
SDHA-206ENST00000505555 ZNF142P52746 1687 aaPredicted RBP24.26■■□□□ 1.47
SDHA-206ENST00000505555 LRRC59Q96AG4 307 aaKnown RBP24.26■■□□□ 1.47
SDHA-206ENST00000505555 SETD1BQ9UPS6 1966 aaKnown RBP24.25■■□□□ 1.47
SDHA-206ENST00000505555 NFAT5O94916 1531 aa24.25■■□□□ 1.47
SDHA-206ENST00000505555 CDC45O75419 566 aa24.25■■□□□ 1.47
SDHA-206ENST00000505555 TTC22Q5TAA0 569 aa24.25■■□□□ 1.47
SDHA-206ENST00000505555 HSCBQ8IWL3 235 aa24.25■■□□□ 1.47
SDHA-206ENST00000505555 LGR6Q9HBX8 967 aa24.25■■□□□ 1.47
SDHA-206ENST00000505555 NPHP4O75161 1426 aaPredicted RBP24.24■■□□□ 1.47
SDHA-206ENST00000505555 LMOD2Q6P5Q4 547 aa24.24■■□□□ 1.47
SDHA-206ENST00000505555 KIF2CQ99661 725 aa24.24■■□□□ 1.47
SDHA-206ENST00000505555 KCNH5Q8NCM2 988 aa24.23■■□□□ 1.47
SDHA-206ENST00000505555 ADAMTSL3P82987 1691 aa24.22■■□□□ 1.47
SDHA-206ENST00000505555 GNAI2P04899 355 aa24.2■■□□□ 1.47
SDHA-206ENST00000505555 HMMRO75330 724 aa24.2■■□□□ 1.46
SDHA-206ENST00000505555 GCP02774 474 aa24.2■■□□□ 1.46
SDHA-206ENST00000505555 BABAM1Q9NWV8 329 aa24.2■■□□□ 1.46
SDHA-206ENST00000505555 HDGFL1Q5TGJ6 251 aa24.19■■□□□ 1.46
SDHA-206ENST00000505555 RBM42Q9BTD8 480 aaKnown RBP24.19■■□□□ 1.46
SDHA-206ENST00000505555 PHAXQ9H814 394 aaKnown RBP24.19■■□□□ 1.46
SDHA-206ENST00000505555 CEMIPQ8WUJ3 1361 aa24.18■■□□□ 1.46
SDHA-206ENST00000505555 EIF2S2P20042 333 aaKnown RBP24.18■■□□□ 1.46
SDHA-206ENST00000505555 SNX21Q969T3 373 aa24.18■■□□□ 1.46
SDHA-206ENST00000505555 EXOC6BQ9Y2D4 811 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms