RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 VAMP4O75379 141 aa21.28■■□□□ 1
LIN54-204ENST00000505397 LTN1O94822 1766 aa21.28■■□□□ 1
LIN54-204ENST00000505397 ZNF853P0CG23 659 aa21.28■■□□□ 1
LIN54-204ENST00000505397 MFAP1P55081 439 aaKnown RBP21.28■■□□□ 1
LIN54-204ENST00000505397 MRPL50Q8N5N7 158 aaKnown RBP21.27■■□□□ 1
LIN54-204ENST00000505397 TMEM94Q12767 1356 aa21.27■■□□□ 1
LIN54-204ENST00000505397 ZBTB7BO15156 539 aaPredicted RBP21.27■□□□□ 0.99
LIN54-204ENST00000505397 IFT57Q9NWB7 429 aa21.27■□□□□ 0.99
LIN54-204ENST00000505397 C1orf167Q5SNV9 1468 aa21.26■□□□□ 0.99
LIN54-204ENST00000505397 FOXO3O43524 673 aa21.26■□□□□ 0.99
LIN54-204ENST00000505397 ATF3P18847 181 aa21.26■□□□□ 0.99
LIN54-204ENST00000505397 RTN4Q9NQC3 1192 aaKnown RBP21.26■□□□□ 0.99
LIN54-204ENST00000505397 HOXC9P31274 260 aa21.25■□□□□ 0.99
LIN54-204ENST00000505397 CHD1LQ86WJ1 897 aa21.25■□□□□ 0.99
LIN54-204ENST00000505397 RTL1A6NKG5 1358 aa21.25■□□□□ 0.99
LIN54-204ENST00000505397 GNAI1P63096 354 aa21.25■□□□□ 0.99
LIN54-204ENST00000505397 NCOA3Q9Y6Q9 1424 aa21.25■□□□□ 0.99
LIN54-204ENST00000505397 KDM4FA0A1W2PPD8 638 aa21.24■□□□□ 0.99
LIN54-204ENST00000505397 RBM25P49756 843 aaKnown RBP21.24■□□□□ 0.99
LIN54-204ENST00000505397 DCCP43146 1447 aa21.24■□□□□ 0.99
LIN54-204ENST00000505397 KCNH5Q8NCM2 988 aa21.24■□□□□ 0.99
LIN54-204ENST00000505397 THUMPD2Q9BTF0 503 aaKnown RBP21.24■□□□□ 0.99
LIN54-204ENST00000505397 CHMP4BQ9H444 224 aaKnown RBP21.24■□□□□ 0.99
LIN54-204ENST00000505397 LMTK3Q96Q04 1460 aa21.23■□□□□ 0.99
LIN54-204ENST00000505397 TSPYL6Q8N831 410 aa21.22■□□□□ 0.99
LIN54-204ENST00000505397 ABCC4O15439 1325 aa21.22■□□□□ 0.99
LIN54-204ENST00000505397 IGSF1Q8N6C5 1336 aa21.22■□□□□ 0.99
LIN54-204ENST00000505397 XPCQ01831 940 aaPredicted RBP21.22■□□□□ 0.99
LIN54-204ENST00000505397 GCC1Q96CN9 775 aa21.22■□□□□ 0.99
LIN54-204ENST00000505397 NFAT5O94916 1531 aa21.22■□□□□ 0.99
LIN54-204ENST00000505397 KDRP35968 1356 aa21.22■□□□□ 0.99
LIN54-204ENST00000505397 BMP2KLQ5H9B9 411 aa21.21■□□□□ 0.99
LIN54-204ENST00000505397 EYA1Q99502 592 aa21.21■□□□□ 0.99
LIN54-204ENST00000505397 LNPKQ9C0E8 428 aa21.21■□□□□ 0.99
LIN54-204ENST00000505397 MBIPQ9NS73 344 aa21.21■□□□□ 0.99
LIN54-204ENST00000505397 TRPM3Q9HCF6 1732 aaPredicted RBP21.21■□□□□ 0.99
LIN54-204ENST00000505397 LMOD2Q6P5Q4 547 aa21.2■□□□□ 0.99
LIN54-204ENST00000505397 CHMP5Q9NZZ3 219 aa21.2■□□□□ 0.98
LIN54-204ENST00000505397 MST1RQ04912 1400 aa21.2■□□□□ 0.98
LIN54-204ENST00000505397 FAM83GA6ND36 823 aa21.19■□□□□ 0.98
LIN54-204ENST00000505397 CFAP44Q96MT7 982 aa21.19■□□□□ 0.98
LIN54-204ENST00000505397 KRT28Q7Z3Y7 464 aa21.19■□□□□ 0.98
LIN54-204ENST00000505397 SNX21Q969T3 373 aa21.19■□□□□ 0.98
LIN54-204ENST00000505397 STRCQ7RTU9 1775 aa21.18■□□□□ 0.98
LIN54-204ENST00000505397 MCM4P33991 863 aa21.18■□□□□ 0.98
LIN54-204ENST00000505397 CADPS2Q86UW7 1296 aa21.18■□□□□ 0.98
LIN54-204ENST00000505397 LTV1Q96GA3 475 aaPredicted RBP21.18■□□□□ 0.98
LIN54-204ENST00000505397 MSH6P52701 1360 aa21.18■□□□□ 0.98
LIN54-204ENST00000505397 DDIT3P35638 169 aa21.17■□□□□ 0.98
LIN54-204ENST00000505397 ZBTB7CA1YPR0 619 aa21.17■□□□□ 0.98
LIN54-204ENST00000505397 DCTN1Q14203 1278 aa21.17■□□□□ 0.98
LIN54-204ENST00000505397 SIRT2Q8IXJ6 389 aa21.17■□□□□ 0.98
LIN54-204ENST00000505397 PHRF1Q9P1Y6 1649 aaKnown RBP21.16■□□□□ 0.98
LIN54-204ENST00000505397 IP6K1Q92551 441 aa21.16■□□□□ 0.98
LIN54-204ENST00000505397 TWISTNBQ3B726 338 aaPredicted RBP21.16■□□□□ 0.98
LIN54-204ENST00000505397 SPRYD3Q8NCJ5 442 aa21.16■□□□□ 0.98
LIN54-204ENST00000505397 SLIT3O75094 1523 aa21.16■□□□□ 0.98
LIN54-204ENST00000505397 HSCBQ8IWL3 235 aa21.15■□□□□ 0.98
LIN54-204ENST00000505397 GAS2L2Q8NHY3 880 aa21.15■□□□□ 0.98
LIN54-204ENST00000505397 ANKRD45Q5TZF3 282 aa21.14■□□□□ 0.97
LIN54-204ENST00000505397 C8orf58Q8NAV2 365 aa21.14■□□□□ 0.97
LIN54-204ENST00000505397 RTF1Q92541 710 aaKnown RBP21.14■□□□□ 0.97
LIN54-204ENST00000505397 PLEKHG5O94827 1062 aa21.13■□□□□ 0.97
LIN54-204ENST00000505397 GCP02774 474 aa21.13■□□□□ 0.97
LIN54-204ENST00000505397 MTHFSDQ2M296 383 aaKnown RBP21.13■□□□□ 0.97
LIN54-204ENST00000505397 L1TD1Q5T7N2 865 aaKnown RBP21.13■□□□□ 0.97
LIN54-204ENST00000505397 C1orf115Q9H7X2 142 aa21.13■□□□□ 0.97
LIN54-204ENST00000505397 MCM10Q7L590 875 aa21.13■□□□□ 0.97
LIN54-204ENST00000505397 XIRP1Q702N8 1843 aaKnown RBP21.12■□□□□ 0.97
LIN54-204ENST00000505397 KIF2CQ99661 725 aa21.12■□□□□ 0.97
LIN54-204ENST00000505397 API5Q9BZZ5 524 aaKnown RBP21.12■□□□□ 0.97
LIN54-204ENST00000505397 ALS2Q96Q42 1657 aa21.12■□□□□ 0.97
LIN54-204ENST00000505397 ELL2O00472 640 aaPredicted RBP21.11■□□□□ 0.97
LIN54-204ENST00000505397 NPHP3Q7Z494 1330 aa21.1■□□□□ 0.97
LIN54-204ENST00000505397 FSD2A1L4K1 749 aa21.1■□□□□ 0.97
LIN54-204ENST00000505397 FAM43AQ8N2R8 423 aa21.1■□□□□ 0.97
LIN54-204ENST00000505397 ARHGEF25Q86VW2 580 aa21.08■□□□□ 0.96
LIN54-204ENST00000505397 HAP1P54257 671 aaPredicted RBP21.07■□□□□ 0.96
LIN54-204ENST00000505397 TBC1D9Q6ZT07 1266 aa21.07■□□□□ 0.96
LIN54-204ENST00000505397 USHBP1Q8N6Y0 703 aa21.07■□□□□ 0.96
LIN54-204ENST00000505397 CIZ1Q9ULV3 898 aaPredicted RBP21.06■□□□□ 0.96
LIN54-204ENST00000505397 RGPD2P0DJD1 1756 aa21.06■□□□□ 0.96
LIN54-204ENST00000505397 INTS3Q68E01 1043 aaKnown RBP21.06■□□□□ 0.96
LIN54-204ENST00000505397 CHL1O00533 1208 aa21.06■□□□□ 0.96
LIN54-204ENST00000505397 HTATSF1O43719 755 aaKnown RBP21.06■□□□□ 0.96
LIN54-204ENST00000505397 RGS12O14924 1447 aa21.05■□□□□ 0.96
LIN54-204ENST00000505397 TRAK2O60296 914 aa21.05■□□□□ 0.96
LIN54-204ENST00000505397 CRB1P82279 1406 aa21.05■□□□□ 0.96
LIN54-204ENST00000505397 GNAT3A8MTJ3 354 aa21.05■□□□□ 0.96
LIN54-204ENST00000505397 DDX17Q92841 729 aaKnown RBP21.05■□□□□ 0.96
LIN54-204ENST00000505397 DCTPP1Q9H773 170 aa21.05■□□□□ 0.96
LIN54-204ENST00000505397 ZNF335Q9H4Z2 1342 aaPredicted RBP21.04■□□□□ 0.96
LIN54-204ENST00000505397 DDX11L8A8MPP1 907 aa21.04■□□□□ 0.96
LIN54-204ENST00000505397 NBPF6Q5VWK0 638 aa21.04■□□□□ 0.96
LIN54-204ENST00000505397 NBPF4Q96M43 638 aa21.04■□□□□ 0.96
LIN54-204ENST00000505397 MAP3K5Q99683 1374 aa21.04■□□□□ 0.96
LIN54-204ENST00000505397 TNS3Q68CZ2 1445 aa21.04■□□□□ 0.96
LIN54-204ENST00000505397 KIAA0232Q92628 1395 aa21.03■□□□□ 0.96
LIN54-204ENST00000505397 MED1Q15648 1581 aaPredicted RBP21.03■□□□□ 0.96
LIN54-204ENST00000505397 LRRC37A3O60309 1634 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms