RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 CYP2E1P05181 493 aaPredicted RBP18.49■□□□□ 0.55
SNF8-203ENST00000504000 GAS2L3Q86XJ1 694 aa18.49■□□□□ 0.55
SNF8-203ENST00000504000 ZRANB1Q9UGI0 708 aa18.49■□□□□ 0.55
SNF8-203ENST00000504000 RTL1A6NKG5 1358 aa18.49■□□□□ 0.55
SNF8-203ENST00000504000 PRKCSHP14314 528 aaPredicted RBP18.48■□□□□ 0.55
SNF8-203ENST00000504000 RRS1Q15050 365 aaKnown RBP18.48■□□□□ 0.55
SNF8-203ENST00000504000 ARXQ96QS3 562 aa18.48■□□□□ 0.55
SNF8-203ENST00000504000 OSBPL3Q9H4L5 887 aa18.48■□□□□ 0.55
SNF8-203ENST00000504000 RGPD1P0DJD0 1748 aa18.48■□□□□ 0.55
SNF8-203ENST00000504000 SSFA2P28290 1259 aa18.48■□□□□ 0.55
SNF8-203ENST00000504000 OVOS2A0A0J9YW53 1432 aa18.47■□□□□ 0.55
SNF8-203ENST00000504000 OVOS2Q6IE36 1432 aa18.47■□□□□ 0.55
SNF8-203ENST00000504000 EIF4A2Q14240 407 aaKnown RBP18.47■□□□□ 0.55
SNF8-203ENST00000504000 PPP1R9BQ96SB3 815 aa18.47■□□□□ 0.55
SNF8-203ENST00000504000 REC8O95072 547 aa18.46■□□□□ 0.55
SNF8-203ENST00000504000 TTC21BQ7Z4L5 1316 aa18.46■□□□□ 0.55
SNF8-203ENST00000504000 HMMRO75330 724 aa18.46■□□□□ 0.54
SNF8-203ENST00000504000 CCDC173Q0VFZ6 552 aa18.46■□□□□ 0.54
SNF8-203ENST00000504000 DCTN1Q14203 1278 aa18.46■□□□□ 0.54
SNF8-203ENST00000504000 TRIM44Q96DX7 344 aaPredicted RBP18.46■□□□□ 0.54
SNF8-203ENST00000504000 NALCNQ8IZF0 1738 aa18.45■□□□□ 0.54
SNF8-203ENST00000504000 USP31Q70CQ4 1352 aa18.45■□□□□ 0.54
SNF8-203ENST00000504000 ST18O60284 1047 aa18.45■□□□□ 0.54
SNF8-203ENST00000504000 SDSP20132 328 aa18.45■□□□□ 0.54
SNF8-203ENST00000504000 ZNF445P59923 1031 aa18.45■□□□□ 0.54
SNF8-203ENST00000504000 TXNDC2Q86VQ3 553 aa18.45■□□□□ 0.54
SNF8-203ENST00000504000 DIP2BQ9P265 1576 aa18.45■□□□□ 0.54
SNF8-203ENST00000504000 PLEKHG3A1L390 1219 aa18.44■□□□□ 0.54
SNF8-203ENST00000504000 SULT6B1Q6IMI4 303 aa18.44■□□□□ 0.54
SNF8-203ENST00000504000 CRB1P82279 1406 aa18.44■□□□□ 0.54
SNF8-203ENST00000504000 PRR36Q9H6K5 1346 aa18.43■□□□□ 0.54
SNF8-203ENST00000504000 TOPAZ1Q8N9V7 1692 aa18.43■□□□□ 0.54
SNF8-203ENST00000504000 MSH6P52701 1360 aa18.43■□□□□ 0.54
SNF8-203ENST00000504000 C16orf71Q8IYS4 520 aaPredicted RBP18.43■□□□□ 0.54
SNF8-203ENST00000504000 DDX49Q9Y6V7 483 aaKnown RBP18.43■□□□□ 0.54
SNF8-203ENST00000504000 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
SNF8-203ENST00000504000 CCT4P50991 539 aaKnown RBP18.42■□□□□ 0.54
SNF8-203ENST00000504000 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
SNF8-203ENST00000504000 UBE2Q2Q8WVN8 375 aa18.41■□□□□ 0.54
SNF8-203ENST00000504000 ERC2O15083 957 aa18.41■□□□□ 0.54
SNF8-203ENST00000504000 AEBP1Q8IUX7 1158 aa18.41■□□□□ 0.54
SNF8-203ENST00000504000 NASPP49321 788 aaPredicted RBP18.4■□□□□ 0.54
SNF8-203ENST00000504000 ANP32BQ92688 251 aaKnown RBP18.4■□□□□ 0.54
SNF8-203ENST00000504000 LMBRD1Q9NUN5 540 aa18.4■□□□□ 0.54
SNF8-203ENST00000504000 HS1BP3Q53T59 392 aa18.39■□□□□ 0.54
SNF8-203ENST00000504000 MEIS3Q99687 375 aa18.39■□□□□ 0.54
SNF8-203ENST00000504000 USP6P35125 1406 aa18.39■□□□□ 0.53
SNF8-203ENST00000504000 MCM2P49736 904 aa18.39■□□□□ 0.53
SNF8-203ENST00000504000 OTUD7AQ8TE49 926 aaPredicted RBP18.39■□□□□ 0.53
SNF8-203ENST00000504000 NCKAP5LQ9HCH0 1330 aa18.39■□□□□ 0.53
SNF8-203ENST00000504000 SSH2Q76I76 1423 aa18.39■□□□□ 0.53
SNF8-203ENST00000504000 KDRP35968 1356 aa18.38■□□□□ 0.53
SNF8-203ENST00000504000 SOS1Q07889 1333 aaPredicted RBP18.38■□□□□ 0.53
SNF8-203ENST00000504000 FAM69CQ0P6D2 419 aa18.38■□□□□ 0.53
SNF8-203ENST00000504000 ERBB4Q15303 1308 aa18.38■□□□□ 0.53
SNF8-203ENST00000504000 PEAK1Q9H792 1746 aa18.38■□□□□ 0.53
SNF8-203ENST00000504000 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
SNF8-203ENST00000504000 MCM10Q7L590 875 aa18.37■□□□□ 0.53
SNF8-203ENST00000504000 IL17RAQ96F46 866 aa18.37■□□□□ 0.53
SNF8-203ENST00000504000 TMEM2Q9UHN6 1383 aa18.37■□□□□ 0.53
SNF8-203ENST00000504000 ACEP12821 1306 aa18.37■□□□□ 0.53
SNF8-203ENST00000504000 EPB41L2O43491 1005 aaKnown RBP18.37■□□□□ 0.53
SNF8-203ENST00000504000 HTATSF1O43719 755 aaKnown RBP18.37■□□□□ 0.53
SNF8-203ENST00000504000 PDE1AP54750 535 aa18.37■□□□□ 0.53
SNF8-203ENST00000504000 KRT24Q2M2I5 525 aa18.37■□□□□ 0.53
SNF8-203ENST00000504000 NAP1L5Q96NT1 182 aaPredicted RBP18.37■□□□□ 0.53
SNF8-203ENST00000504000 ROBO2Q9HCK4 1378 aa18.36■□□□□ 0.53
SNF8-203ENST00000504000 TTC21AQ8NDW8 1320 aa18.36■□□□□ 0.53
SNF8-203ENST00000504000 SALL3Q9BXA9 1300 aa18.35■□□□□ 0.53
SNF8-203ENST00000504000 ANAPC15P60006 121 aa18.35■□□□□ 0.53
SNF8-203ENST00000504000 MCTP1Q6DN14 999 aa18.35■□□□□ 0.53
SNF8-203ENST00000504000 ADAMTS13Q76LX8 1427 aa18.35■□□□□ 0.53
SNF8-203ENST00000504000 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.34■□□□□ 0.53
SNF8-203ENST00000504000 SMARCA5O60264 1052 aaPredicted RBP18.34■□□□□ 0.53
SNF8-203ENST00000504000 GNAI2P04899 355 aa18.34■□□□□ 0.53
SNF8-203ENST00000504000 ZSCAN23Q3MJ62 389 aa18.34■□□□□ 0.53
SNF8-203ENST00000504000 HSP90AB2PQ58FF8 381 aa18.34■□□□□ 0.53
SNF8-203ENST00000504000 ZSCAN30Q86W11 494 aa18.34■□□□□ 0.53
SNF8-203ENST00000504000 SBNO1A3KN83 1393 aa18.33■□□□□ 0.52
SNF8-203ENST00000504000 RTF1Q92541 710 aaKnown RBP18.33■□□□□ 0.52
SNF8-203ENST00000504000 UBR1Q8IWV7 1749 aa18.33■□□□□ 0.52
SNF8-203ENST00000504000 FLT4P35916 1363 aa18.32■□□□□ 0.52
SNF8-203ENST00000504000 TNRQ92752 1358 aa18.32■□□□□ 0.52
SNF8-203ENST00000504000 GNAI3P08754 354 aa18.32■□□□□ 0.52
SNF8-203ENST00000504000 INTS4Q96HW7 963 aaKnown RBP18.32■□□□□ 0.52
SNF8-203ENST00000504000 SRCIN1Q9C0H9 1055 aa18.32■□□□□ 0.52
SNF8-203ENST00000504000 BABAM1Q9NWV8 329 aa18.32■□□□□ 0.52
SNF8-203ENST00000504000 ZDHHC9Q9Y397 364 aa18.32■□□□□ 0.52
SNF8-203ENST00000504000 TUBGCP6Q96RT7 1819 aa18.32■□□□□ 0.52
SNF8-203ENST00000504000 PLEKHG1Q9ULL1 1385 aa18.32■□□□□ 0.52
SNF8-203ENST00000504000 CUL4AQ13619 759 aa18.31■□□□□ 0.52
SNF8-203ENST00000504000 PDLIM2Q96JY6 352 aa18.31■□□□□ 0.52
SNF8-203ENST00000504000 TSPYL4Q9UJ04 414 aa18.31■□□□□ 0.52
SNF8-203ENST00000504000 FMN2Q9NZ56 1722 aa18.31■□□□□ 0.52
SNF8-203ENST00000504000 PTPRUQ92729 1446 aa18.31■□□□□ 0.52
SNF8-203ENST00000504000 LRRC37A3O60309 1634 aa18.31■□□□□ 0.52
SNF8-203ENST00000504000 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
SNF8-203ENST00000504000 STAP2Q9UGK3 403 aa18.31■□□□□ 0.52
SNF8-203ENST00000504000 AOX1Q06278 1338 aa18.3■□□□□ 0.52
SNF8-203ENST00000504000 MAP3K19Q56UN5 1328 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms