RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 OVOS2Q6IE36 1432 aa24.45■■□□□ 1.51
NKX2-1-202ENST00000498187 ACEP12821 1306 aa24.45■■□□□ 1.51
NKX2-1-202ENST00000498187 TOPAZ1Q8N9V7 1692 aa24.45■■□□□ 1.51
NKX2-1-202ENST00000498187 CDC45O75419 566 aa24.45■■□□□ 1.51
NKX2-1-202ENST00000498187 MCM10Q7L590 875 aa24.45■■□□□ 1.51
NKX2-1-202ENST00000498187 DCTPP1Q9H773 170 aa24.45■■□□□ 1.51
NKX2-1-202ENST00000498187 RGS12O14924 1447 aa24.44■■□□□ 1.5
NKX2-1-202ENST00000498187 CHL1O00533 1208 aa24.44■■□□□ 1.5
NKX2-1-202ENST00000498187 GSPT1P15170 499 aaKnown RBP24.44■■□□□ 1.5
NKX2-1-202ENST00000498187 PLEKHM2Q8IWE5 1019 aa24.44■■□□□ 1.5
NKX2-1-202ENST00000498187 PEAK1Q9H792 1746 aa24.44■■□□□ 1.5
NKX2-1-202ENST00000498187 NUTM2FA1L443 756 aa24.44■■□□□ 1.5
NKX2-1-202ENST00000498187 CD2BP2O95400 341 aaKnown RBP24.44■■□□□ 1.5
NKX2-1-202ENST00000498187 HAP1P54257 671 aaPredicted RBP24.44■■□□□ 1.5
NKX2-1-202ENST00000498187 ADAMTS13Q76LX8 1427 aa24.44■■□□□ 1.5
NKX2-1-202ENST00000498187 K7ELQ4 463 aaPredicted RBP24.43■■□□□ 1.5
NKX2-1-202ENST00000498187 ATP10DQ9P241 1426 aa24.42■■□□□ 1.5
NKX2-1-202ENST00000498187 HSP90AB2PQ58FF8 381 aa24.42■■□□□ 1.5
NKX2-1-202ENST00000498187 NALCNQ8IZF0 1738 aa24.42■■□□□ 1.5
NKX2-1-202ENST00000498187 KIAA0232Q92628 1395 aa24.41■■□□□ 1.5
NKX2-1-202ENST00000498187 RGPD1P0DJD0 1748 aa24.41■■□□□ 1.5
NKX2-1-202ENST00000498187 USP6P35125 1406 aa24.41■■□□□ 1.5
NKX2-1-202ENST00000498187 ANKRD44Q8N8A2 993 aa24.41■■□□□ 1.5
NKX2-1-202ENST00000498187 NAP1L5Q96NT1 182 aaPredicted RBP24.41■■□□□ 1.5
NKX2-1-202ENST00000498187 RBM42Q9BTD8 480 aaKnown RBP24.41■■□□□ 1.5
NKX2-1-202ENST00000498187 PLEKHG1Q9ULL1 1385 aa24.41■■□□□ 1.5
NKX2-1-202ENST00000498187 PLEKHG3A1L390 1219 aa24.4■■□□□ 1.5
NKX2-1-202ENST00000498187 MSH6P52701 1360 aa24.39■■□□□ 1.5
NKX2-1-202ENST00000498187 TTC22Q5TAA0 569 aa24.39■■□□□ 1.49
NKX2-1-202ENST00000498187 ESPNB1AK53 854 aa24.38■■□□□ 1.49
NKX2-1-202ENST00000498187 C16orf71Q8IYS4 520 aaPredicted RBP24.38■■□□□ 1.49
NKX2-1-202ENST00000498187 TRIM44Q96DX7 344 aaPredicted RBP24.38■■□□□ 1.49
NKX2-1-202ENST00000498187 SOX12O15370 315 aa24.38■■□□□ 1.49
NKX2-1-202ENST00000498187 CEP85Q6P2H3 762 aa24.38■■□□□ 1.49
NKX2-1-202ENST00000498187 RPAP2Q8IXW5 612 aaPredicted RBP24.38■■□□□ 1.49
NKX2-1-202ENST00000498187 FOXD4L1Q9NU39 408 aa24.38■■□□□ 1.49
NKX2-1-202ENST00000498187 GOLGA6L22H0YM25 854 aa24.37■■□□□ 1.49
NKX2-1-202ENST00000498187 PTPRCP08575 1304 aa24.37■■□□□ 1.49
NKX2-1-202ENST00000498187 USP31Q70CQ4 1352 aa24.37■■□□□ 1.49
NKX2-1-202ENST00000498187 CRB1P82279 1406 aa24.36■■□□□ 1.49
NKX2-1-202ENST00000498187 RTL1A6NKG5 1358 aa24.36■■□□□ 1.49
NKX2-1-202ENST00000498187 LTKP29376 864 aa24.34■■□□□ 1.49
NKX2-1-202ENST00000498187 GAS2L3Q86XJ1 694 aa24.34■■□□□ 1.49
NKX2-1-202ENST00000498187 OTUD7AQ8TE49 926 aaPredicted RBP24.34■■□□□ 1.49
NKX2-1-202ENST00000498187 MEIS3Q99687 375 aa24.34■■□□□ 1.49
NKX2-1-202ENST00000498187 CLEC17AQ6ZS10 378 aa24.34■■□□□ 1.49
NKX2-1-202ENST00000498187 FMN2Q9NZ56 1722 aa24.33■■□□□ 1.49
NKX2-1-202ENST00000498187 SLIT1O75093 1534 aa24.33■■□□□ 1.48
NKX2-1-202ENST00000498187 SLC4A2P04920 1241 aa24.33■■□□□ 1.48
NKX2-1-202ENST00000498187 MIS18AQ9NYP9 233 aa24.33■■□□□ 1.48
NKX2-1-202ENST00000498187 ARHGEF10O15013 1369 aa24.32■■□□□ 1.48
NKX2-1-202ENST00000498187 MAP3K19Q56UN5 1328 aa24.32■■□□□ 1.48
NKX2-1-202ENST00000498187 PLPPR3Q6T4P5 718 aa24.32■■□□□ 1.48
NKX2-1-202ENST00000498187 GAS2L2Q8NHY3 880 aa24.32■■□□□ 1.48
NKX2-1-202ENST00000498187 RIMS1Q86UR5 1692 aaKnown RBP24.32■■□□□ 1.48
NKX2-1-202ENST00000498187 SSH2Q76I76 1423 aa24.32■■□□□ 1.48
NKX2-1-202ENST00000498187 CEBPAP49715 358 aaPredicted RBP24.32■■□□□ 1.48
NKX2-1-202ENST00000498187 APBB1O00213 710 aa24.31■■□□□ 1.48
NKX2-1-202ENST00000498187 FOXO3O43524 673 aa24.31■■□□□ 1.48
NKX2-1-202ENST00000498187 SMARCA5O60264 1052 aaPredicted RBP24.31■■□□□ 1.48
NKX2-1-202ENST00000498187 ARHGAP23Q9P227 1491 aa24.31■■□□□ 1.48
NKX2-1-202ENST00000498187 PTPRUQ92729 1446 aa24.31■■□□□ 1.48
NKX2-1-202ENST00000498187 SLC26A8Q96RN1 970 aa24.3■■□□□ 1.48
NKX2-1-202ENST00000498187 MTHFSDQ2M296 383 aaKnown RBP24.29■■□□□ 1.48
NKX2-1-202ENST00000498187 SSFA2P28290 1259 aa24.29■■□□□ 1.48
NKX2-1-202ENST00000498187 RABEP1Q15276 862 aa24.29■■□□□ 1.48
NKX2-1-202ENST00000498187 RTF1Q92541 710 aaKnown RBP24.28■■□□□ 1.48
NKX2-1-202ENST00000498187 USP26Q9BXU7 913 aa24.28■■□□□ 1.48
NKX2-1-202ENST00000498187 TSPYL4Q9UJ04 414 aa24.28■■□□□ 1.48
NKX2-1-202ENST00000498187 EID1Q9Y6B2 187 aa24.28■■□□□ 1.48
NKX2-1-202ENST00000498187 SDSP20132 328 aa24.28■■□□□ 1.48
NKX2-1-202ENST00000498187 KLHL40Q2TBA0 621 aa24.28■■□□□ 1.48
NKX2-1-202ENST00000498187 TTC21AQ8NDW8 1320 aa24.27■■□□□ 1.48
NKX2-1-202ENST00000498187 IBTKQ9P2D0 1353 aaPredicted RBP24.27■■□□□ 1.48
NKX2-1-202ENST00000498187 G2E3Q7L622 706 aa24.27■■□□□ 1.48
NKX2-1-202ENST00000498187 FLT4P35916 1363 aa24.27■■□□□ 1.48
NKX2-1-202ENST00000498187 ERBB4Q15303 1308 aa24.26■■□□□ 1.47
NKX2-1-202ENST00000498187 SBNO1A3KN83 1393 aa24.26■■□□□ 1.47
NKX2-1-202ENST00000498187 CCDC173Q0VFZ6 552 aa24.26■■□□□ 1.47
NKX2-1-202ENST00000498187 SLC4A10Q6U841 1118 aa24.26■■□□□ 1.47
NKX2-1-202ENST00000498187 F6X3S4 739 aa24.25■■□□□ 1.47
NKX2-1-202ENST00000498187 BAG4O95429 457 aaKnown RBP24.25■■□□□ 1.47
NKX2-1-202ENST00000498187 ANP32BQ92688 251 aaKnown RBP24.25■■□□□ 1.47
NKX2-1-202ENST00000498187 DDX49Q9Y6V7 483 aaKnown RBP24.25■■□□□ 1.47
NKX2-1-202ENST00000498187 DIP2AQ14689 1571 aa24.25■■□□□ 1.47
NKX2-1-202ENST00000498187 FER1L4A9Z1Z3 1794 aa24.25■■□□□ 1.47
NKX2-1-202ENST00000498187 CASC1Q6TDU7 716 aa24.24■■□□□ 1.47
NKX2-1-202ENST00000498187 KDRP35968 1356 aa24.24■■□□□ 1.47
NKX2-1-202ENST00000498187 HMMRO75330 724 aa24.24■■□□□ 1.47
NKX2-1-202ENST00000498187 NUCB2P80303 420 aa24.24■■□□□ 1.47
NKX2-1-202ENST00000498187 AMOTL2Q9Y2J4 779 aa24.23■■□□□ 1.47
NKX2-1-202ENST00000498187 CEP170BQ9Y4F5 1589 aaPredicted RBP24.23■■□□□ 1.47
NKX2-1-202ENST00000498187 TBX22Q9Y458 520 aa24.23■■□□□ 1.47
NKX2-1-202ENST00000498187 RGPD8O14715 1765 aaPredicted RBP24.23■■□□□ 1.47
NKX2-1-202ENST00000498187 NASPP49321 788 aaPredicted RBP24.22■■□□□ 1.47
NKX2-1-202ENST00000498187 CCT4P50991 539 aaKnown RBP24.22■■□□□ 1.47
NKX2-1-202ENST00000498187 AK9Q5TCS8 1911 aa24.22■■□□□ 1.47
NKX2-1-202ENST00000498187 AMPHP49418 695 aa24.22■■□□□ 1.47
NKX2-1-202ENST00000498187 NGDNQ8NEJ9 315 aaKnown RBP24.22■■□□□ 1.47
NKX2-1-202ENST00000498187 PPP1R9BQ96SB3 815 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms