RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 J3QL48 77 aa12.08□□□□□ -0.48
LRCH3-218ENST00000493726 MYSM1Q5VVJ2 828 aa12.08□□□□□ -0.48
LRCH3-218ENST00000493726 CFDP1Q9UEE9 299 aaPredicted RBP12.08□□□□□ -0.48
LRCH3-218ENST00000493726 GJA5P36382 358 aa12.07□□□□□ -0.48
LRCH3-218ENST00000493726 ARHGEF5Q12774 1597 aa12.07□□□□□ -0.48
LRCH3-218ENST00000493726 PTPRNQ16849 979 aa12.07□□□□□ -0.48
LRCH3-218ENST00000493726 SNIP1Q8TAD8 396 aaKnown RBP12.07□□□□□ -0.48
LRCH3-218ENST00000493726 SPDYE5A6NIY4 337 aa12.06□□□□□ -0.48
LRCH3-218ENST00000493726 SMPD1P17405 629 aa12.06□□□□□ -0.48
LRCH3-218ENST00000493726 DACH1Q9UI36 760 aa12.06□□□□□ -0.48
LRCH3-218ENST00000493726 ARID4BQ4LE39 1312 aaPredicted RBP12.06□□□□□ -0.48
LRCH3-218ENST00000493726 WNT7BP56706 349 aa12.05□□□□□ -0.48
LRCH3-218ENST00000493726 LINC01559Q495D7 138 aa12.05□□□□□ -0.48
LRCH3-218ENST00000493726 UNC93B1Q9H1C4 597 aa12.05□□□□□ -0.48
LRCH3-218ENST00000493726 ZBTB3Q9H5J0 574 aa12.05□□□□□ -0.48
LRCH3-218ENST00000493726 EVA1BQ9NVM1 165 aa12.05□□□□□ -0.48
LRCH3-218ENST00000493726 MIA2Q96PC5 1412 aa12.04□□□□□ -0.48
LRCH3-218ENST00000493726 MROH2AA6NES4 1674 aa12.04□□□□□ -0.48
LRCH3-218ENST00000493726 ADGBQ8N7X0 1667 aa12.04□□□□□ -0.48
LRCH3-218ENST00000493726 CAMSAP2Q08AD1 1489 aa12.04□□□□□ -0.48
LRCH3-218ENST00000493726 HNRNPMP52272 730 aaKnown RBP eCLIP12.04□□□□□ -0.48
LRCH3-218ENST00000493726 QPCTQ16769 361 aa12.04□□□□□ -0.48
LRCH3-218ENST00000493726 GPBP1L1Q9HC44 474 aaPredicted RBP12.04□□□□□ -0.48
LRCH3-218ENST00000493726 CCDC141Q6ZP82 1450 aa12.03□□□□□ -0.48
LRCH3-218ENST00000493726 AVPP01185 164 aa12.03□□□□□ -0.48
LRCH3-218ENST00000493726 KCNH2Q12809 1159 aa12.03□□□□□ -0.48
LRCH3-218ENST00000493726 DESI1Q6ICB0 168 aa12.03□□□□□ -0.48
LRCH3-218ENST00000493726 MAST1Q9Y2H9 1570 aa12.03□□□□□ -0.48
LRCH3-218ENST00000493726 SPAG9O60271 1321 aaKnown RBP12.03□□□□□ -0.48
LRCH3-218ENST00000493726 ZNF644Q9H582 1327 aaPredicted RBP12.03□□□□□ -0.48
LRCH3-218ENST00000493726 A2MP01023 1474 aa12.02□□□□□ -0.48
LRCH3-218ENST00000493726 SH3BP2P78314 561 aa12.02□□□□□ -0.49
LRCH3-218ENST00000493726 BAP1Q92560 729 aa12.02□□□□□ -0.49
LRCH3-218ENST00000493726 TSC1Q92574 1164 aa12.02□□□□□ -0.49
LRCH3-218ENST00000493726 CNTLNQ9NXG0 1405 aa12.02□□□□□ -0.49
LRCH3-218ENST00000493726 FAM135AQ9P2D6 1515 aa12.01□□□□□ -0.49
LRCH3-218ENST00000493726 C3P01024 1663 aa12.01□□□□□ -0.49
LRCH3-218ENST00000493726 PREX1Q8TCU6 1659 aa12.01□□□□□ -0.49
LRCH3-218ENST00000493726 AXIN1O15169 862 aa12.01□□□□□ -0.49
LRCH3-218ENST00000493726 HSPA2P54652 639 aa12.01□□□□□ -0.49
LRCH3-218ENST00000493726 KANK4Q5T7N3 995 aaPredicted RBP12.01□□□□□ -0.49
LRCH3-218ENST00000493726 ILDR2Q71H61 639 aa12.01□□□□□ -0.49
LRCH3-218ENST00000493726 MYOM3Q5VTT5 1437 aa12.01□□□□□ -0.49
LRCH3-218ENST00000493726 NUTM2BA6NNL0 878 aaPredicted RBP12□□□□□ -0.49
LRCH3-218ENST00000493726 NUTM2EB1AL46 878 aaPredicted RBP12□□□□□ -0.49
LRCH3-218ENST00000493726 CTHP32929 405 aa12□□□□□ -0.49
LRCH3-218ENST00000493726 NUTM2DQ5VT03 806 aaPredicted RBP12□□□□□ -0.49
LRCH3-218ENST00000493726 PRPF38BQ5VTL8 546 aaKnown RBP12□□□□□ -0.49
LRCH3-218ENST00000493726 LYPD8Q6UX82 237 aa12□□□□□ -0.49
LRCH3-218ENST00000493726 NUTM2AQ8IVF1 878 aaPredicted RBP12□□□□□ -0.49
LRCH3-218ENST00000493726 EHBP1Q8NDI1 1231 aa12□□□□□ -0.49
LRCH3-218ENST00000493726 POLR3EQ9NVU0 708 aa12□□□□□ -0.49
LRCH3-218ENST00000493726 SETD1BQ9UPS6 1966 aaKnown RBP11.99□□□□□ -0.49
LRCH3-218ENST00000493726 HPS1Q92902 700 aa11.99□□□□□ -0.49
LRCH3-218ENST00000493726 MAP10Q9P2G4 905 aa11.99□□□□□ -0.49
LRCH3-218ENST00000493726 ZNF777Q9ULD5 760 aaPredicted RBP11.99□□□□□ -0.49
LRCH3-218ENST00000493726 DHX29Q7Z478 1369 aaKnown RBP11.99□□□□□ -0.49
LRCH3-218ENST00000493726 NPATQ14207 1427 aa11.98□□□□□ -0.49
LRCH3-218ENST00000493726 PER1O15534 1290 aaPredicted RBP11.98□□□□□ -0.49
LRCH3-218ENST00000493726 ALDH1A1P00352 501 aa11.98□□□□□ -0.49
LRCH3-218ENST00000493726 CRIPAKQ8N1N5 446 aa11.98□□□□□ -0.49
LRCH3-218ENST00000493726 LILRB3O75022 631 aa11.97□□□□□ -0.49
LRCH3-218ENST00000493726 CLK2P49760 499 aaKnown RBP11.97□□□□□ -0.49
LRCH3-218ENST00000493726 RTL5Q5HYW3 569 aaPredicted RBP11.97□□□□□ -0.49
LRCH3-218ENST00000493726 KDM4CQ9H3R0 1056 aa11.97□□□□□ -0.49
LRCH3-218ENST00000493726 TCOF1Q13428 1488 aaKnown RBP11.96□□□□□ -0.49
LRCH3-218ENST00000493726 SIAH2O43255 324 aa11.96□□□□□ -0.49
LRCH3-218ENST00000493726 SHANK2Q9UPX8 1470 aa11.95□□□□□ -0.5
LRCH3-218ENST00000493726 MLECQ14165 292 aa11.95□□□□□ -0.5
LRCH3-218ENST00000493726 CTC1Q2NKJ3 1217 aa11.95□□□□□ -0.5
LRCH3-218ENST00000493726 ZNF511Q8NB15 262 aa11.95□□□□□ -0.5
LRCH3-218ENST00000493726 ZNF775Q96BV0 537 aaPredicted RBP11.95□□□□□ -0.5
LRCH3-218ENST00000493726 RNF17Q9BXT8 1623 aaKnown RBP11.94□□□□□ -0.5
LRCH3-218ENST00000493726 F12P00748 615 aaPredicted RBP11.94□□□□□ -0.5
LRCH3-218ENST00000493726 SMCPP49901 116 aaPredicted RBP11.94□□□□□ -0.5
LRCH3-218ENST00000493726 FAM117AQ9C073 453 aa11.94□□□□□ -0.5
LRCH3-218ENST00000493726 GMPR2Q9P2T1 348 aaKnown RBP11.94□□□□□ -0.5
LRCH3-218ENST00000493726 EIF2AK4Q9P2K8 1649 aaKnown RBP11.93□□□□□ -0.5
LRCH3-218ENST00000493726 TUSC1Q2TAM9 212 aa11.93□□□□□ -0.5
LRCH3-218ENST00000493726 TLL2Q9Y6L7 1015 aa11.93□□□□□ -0.5
LRCH3-218ENST00000493726 CROCC2H7BZ55 1655 aa11.93□□□□□ -0.5
LRCH3-218ENST00000493726 ZMYM3Q14202 1370 aa11.92□□□□□ -0.5
LRCH3-218ENST00000493726 ZNF142P52746 1687 aaPredicted RBP11.92□□□□□ -0.5
LRCH3-218ENST00000493726 CLTCQ00610 1675 aaKnown RBP11.92□□□□□ -0.5
LRCH3-218ENST00000493726 RSPH6AQ9H0K4 717 aa11.92□□□□□ -0.5
LRCH3-218ENST00000493726 PTPRKQ15262 1439 aa11.92□□□□□ -0.5
LRCH3-218ENST00000493726 FGD6Q6ZV73 1430 aa11.92□□□□□ -0.5
LRCH3-218ENST00000493726 STRCQ7RTU9 1775 aa11.92□□□□□ -0.5
LRCH3-218ENST00000493726 KDM5DQ9BY66 1539 aa11.91□□□□□ -0.5
LRCH3-218ENST00000493726 DNMT1P26358 1616 aaKnown RBP11.91□□□□□ -0.5
LRCH3-218ENST00000493726 MROH1Q8NDA8 1641 aa11.91□□□□□ -0.5
LRCH3-218ENST00000493726 PTPN23Q9H3S7 1636 aa11.91□□□□□ -0.5
LRCH3-218ENST00000493726 CEBPAP49715 358 aaPredicted RBP11.91□□□□□ -0.5
LRCH3-218ENST00000493726 UHRF1BP1Q6BDS2 1440 aa11.91□□□□□ -0.5
LRCH3-218ENST00000493726 ABCC5O15440 1437 aa11.9□□□□□ -0.5
LRCH3-218ENST00000493726 FBXO31Q5XUX0 539 aaPredicted RBP11.9□□□□□ -0.5
LRCH3-218ENST00000493726 DISP3Q9P2K9 1392 aa11.9□□□□□ -0.5
LRCH3-218ENST00000493726 FOXJ1Q92949 421 aa11.89□□□□□ -0.51
LRCH3-218ENST00000493726 WASF2Q9Y6W5 498 aa11.89□□□□□ -0.51
LRCH3-218ENST00000493726 ZC3H13Q5T200 1668 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms