RNA–Protein interactions for RNA: ENST00000491203.5

CNOT4-210, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-210ENST00000491203 PSDA5PKW4 1024 aaPredicted RBP11.66□□□□□ -0.54
CNOT4-210ENST00000491203 XPCQ01831 940 aaPredicted RBP11.66□□□□□ -0.54
CNOT4-210ENST00000491203 KRT28Q7Z3Y7 464 aa11.66□□□□□ -0.54
CNOT4-210ENST00000491203 DDX17Q92841 729 aaKnown RBP11.66□□□□□ -0.54
CNOT4-210ENST00000491203 RNF166Q96A37 237 aaPredicted RBP11.66□□□□□ -0.54
CNOT4-210ENST00000491203 PANK3Q9H999 370 aa11.66□□□□□ -0.54
CNOT4-210ENST00000491203 CPSF1Q10570 1443 aaKnown RBP11.66□□□□□ -0.54
CNOT4-210ENST00000491203 A0A1W2PP64 1363 aa11.66□□□□□ -0.54
CNOT4-210ENST00000491203 KTN1Q86UP2 1357 aaKnown RBP11.66□□□□□ -0.54
CNOT4-210ENST00000491203 CD163L1Q9NR16 1453 aa11.65□□□□□ -0.54
CNOT4-210ENST00000491203 PSEN2P49810 448 aa11.65□□□□□ -0.54
CNOT4-210ENST00000491203 USP6P35125 1406 aa11.64□□□□□ -0.55
CNOT4-210ENST00000491203 ARHGAP33O14559 1287 aa11.64□□□□□ -0.55
CNOT4-210ENST00000491203 DMRTA1Q5VZB9 504 aa11.64□□□□□ -0.55
CNOT4-210ENST00000491203 FBXO41Q8TF61 875 aa11.64□□□□□ -0.55
CNOT4-210ENST00000491203 BRD4O60885 1362 aaPredicted RBP11.64□□□□□ -0.55
CNOT4-210ENST00000491203 NHSL1Q5SYE7 1610 aa11.64□□□□□ -0.55
CNOT4-210ENST00000491203 AHDC1Q5TGY3 1603 aaPredicted RBP11.64□□□□□ -0.55
CNOT4-210ENST00000491203 SOS2Q07890 1332 aaPredicted RBP11.63□□□□□ -0.55
CNOT4-210ENST00000491203 DDX10Q13206 875 aaKnown RBP11.63□□□□□ -0.55
CNOT4-210ENST00000491203 ANO8Q9HCE9 1232 aaPredicted RBP11.63□□□□□ -0.55
CNOT4-210ENST00000491203 AKAP12Q02952 1782 aa11.63□□□□□ -0.55
CNOT4-210ENST00000491203 SBNO1A3KN83 1393 aa11.63□□□□□ -0.55
CNOT4-210ENST00000491203 PXDNQ92626 1479 aa11.63□□□□□ -0.55
CNOT4-210ENST00000491203 EDC4Q6P2E9 1401 aaKnown RBP11.62□□□□□ -0.55
CNOT4-210ENST00000491203 NSD3Q9BZ95 1437 aa11.62□□□□□ -0.55
CNOT4-210ENST00000491203 CARD14Q9BXL6 1004 aa11.62□□□□□ -0.55
CNOT4-210ENST00000491203 MON2Q7Z3U7 1717 aa11.62□□□□□ -0.55
CNOT4-210ENST00000491203 TTC21BQ7Z4L5 1316 aa11.61□□□□□ -0.55
CNOT4-210ENST00000491203 PHLPP1O60346 1717 aa11.61□□□□□ -0.55
CNOT4-210ENST00000491203 PPP4R3BQ5MIZ7 849 aa11.61□□□□□ -0.55
CNOT4-210ENST00000491203 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.61□□□□□ -0.557e-7■■■■□ 23.2
CNOT4-210ENST00000491203 KNSTRNQ9Y448 316 aa11.61□□□□□ -0.55
CNOT4-210ENST00000491203 TTC21AQ8NDW8 1320 aa11.6□□□□□ -0.55
CNOT4-210ENST00000491203 SSH2Q76I76 1423 aa11.6□□□□□ -0.55
CNOT4-210ENST00000491203 HSPA1LP34931 641 aa11.6□□□□□ -0.55
CNOT4-210ENST00000491203 PTGER2P43116 358 aa11.6□□□□□ -0.55
CNOT4-210ENST00000491203 PLCB2Q00722 1185 aa11.6□□□□□ -0.55
CNOT4-210ENST00000491203 LMOD2Q6P5Q4 547 aa11.6□□□□□ -0.55
CNOT4-210ENST00000491203 LRRC59Q96AG4 307 aaKnown RBP11.6□□□□□ -0.55
CNOT4-210ENST00000491203 TNS3Q68CZ2 1445 aa11.6□□□□□ -0.55
CNOT4-210ENST00000491203 SPATA31A3Q5VYP0 1347 aa11.6□□□□□ -0.55
CNOT4-210ENST00000491203 EVI5O60447 810 aa11.59□□□□□ -0.55
CNOT4-210ENST00000491203 FOSBP53539 338 aa11.59□□□□□ -0.55
CNOT4-210ENST00000491203 ADGRD1Q6QNK2 874 aa11.59□□□□□ -0.55
CNOT4-210ENST00000491203 ABTB2Q8N961 1025 aa11.59□□□□□ -0.55
CNOT4-210ENST00000491203 TRPM3Q9HCF6 1732 aaPredicted RBP11.59□□□□□ -0.55
CNOT4-210ENST00000491203 CGNL1Q0VF96 1302 aa11.59□□□□□ -0.55
CNOT4-210ENST00000491203 NRKQ7Z2Y5 1582 aa11.58□□□□□ -0.55
CNOT4-210ENST00000491203 ARHGEF10O15013 1369 aa11.58□□□□□ -0.56
CNOT4-210ENST00000491203 COL16A1Q07092 1604 aaPredicted RBP11.58□□□□□ -0.56
CNOT4-210ENST00000491203 NME9Q86XW9 330 aa11.58□□□□□ -0.56
CNOT4-210ENST00000491203 PER1O15534 1290 aaPredicted RBP11.57□□□□□ -0.56
CNOT4-210ENST00000491203 NUTM2GQ5VZR2 741 aa11.57□□□□□ -0.56
CNOT4-210ENST00000491203 PAXIP1Q6ZW49 1069 aaPredicted RBP11.57□□□□□ -0.56
CNOT4-210ENST00000491203 ZNF454Q8N9F8 522 aa11.57□□□□□ -0.56
CNOT4-210ENST00000491203 SPRYD3Q8NCJ5 442 aa11.57□□□□□ -0.56
CNOT4-210ENST00000491203 FYB1O15117 783 aa11.56□□□□□ -0.56
CNOT4-210ENST00000491203 HRO43593 1189 aa11.56□□□□□ -0.56
CNOT4-210ENST00000491203 CAMK2BQ13554 666 aa11.56□□□□□ -0.56
CNOT4-210ENST00000491203 NLRP13Q86W25 1043 aa11.56□□□□□ -0.56
CNOT4-210ENST00000491203 CFAP44Q96MT7 982 aa11.56□□□□□ -0.56
CNOT4-210ENST00000491203 GGNBP2Q9H3C7 697 aa11.56□□□□□ -0.56
CNOT4-210ENST00000491203 NSD2O96028 1365 aa11.55□□□□□ -0.56
CNOT4-210ENST00000491203 USP31Q70CQ4 1352 aa11.55□□□□□ -0.56
CNOT4-210ENST00000491203 PNPLA6Q8IY17 1366 aa11.55□□□□□ -0.56
CNOT4-210ENST00000491203 JCADQ9P266 1359 aa11.55□□□□□ -0.56
CNOT4-210ENST00000491203 COG3Q96JB2 828 aa11.55□□□□□ -0.56
CNOT4-210ENST00000491203 KCNK17Q96T54 332 aa11.55□□□□□ -0.56
CNOT4-210ENST00000491203 ALS2Q96Q42 1657 aa11.55□□□□□ -0.56
CNOT4-210ENST00000491203 CNGB1Q14028 1251 aaPredicted RBP11.54□□□□□ -0.56
CNOT4-210ENST00000491203 CC2D1BQ5T0F9 858 aaKnown RBP11.54□□□□□ -0.56
CNOT4-210ENST00000491203 PIK3C2AO00443 1686 aa11.54□□□□□ -0.56
CNOT4-210ENST00000491203 NPC1L1Q9UHC9 1359 aa11.54□□□□□ -0.56
CNOT4-210ENST00000491203 KIF20BQ96Q89 1820 aa11.53□□□□□ -0.56
CNOT4-210ENST00000491203 TK2O00142 265 aa11.53□□□□□ -0.56
CNOT4-210ENST00000491203 HAP1P54257 671 aaPredicted RBP11.53□□□□□ -0.56
CNOT4-210ENST00000491203 MORC1Q86VD1 984 aa11.53□□□□□ -0.56
CNOT4-210ENST00000491203 BCL2L12Q9HB09 334 aa11.53□□□□□ -0.56
CNOT4-210ENST00000491203 USP19O94966 1318 aa11.53□□□□□ -0.56
CNOT4-210ENST00000491203 OVOS2A0A0J9YW53 1432 aa11.52□□□□□ -0.56
CNOT4-210ENST00000491203 OVOS2Q6IE36 1432 aa11.52□□□□□ -0.56
CNOT4-210ENST00000491203 MAP3K9P80192 1104 aa11.52□□□□□ -0.57
CNOT4-210ENST00000491203 CABLES1Q8TDN4 633 aa11.52□□□□□ -0.57
CNOT4-210ENST00000491203 MED1Q15648 1581 aaPredicted RBP11.52□□□□□ -0.57
CNOT4-210ENST00000491203 COL22A1Q8NFW1 1626 aaPredicted RBP11.51□□□□□ -0.57
CNOT4-210ENST00000491203 KCNH5Q8NCM2 988 aa11.51□□□□□ -0.57
CNOT4-210ENST00000491203 ADAM33Q9BZ11 813 aa11.51□□□□□ -0.57
CNOT4-210ENST00000491203 SHPRHQ149N8 1683 aa11.51□□□□□ -0.57
CNOT4-210ENST00000491203 SPATA31A6Q5VVP1 1343 aa11.51□□□□□ -0.57
CNOT4-210ENST00000491203 NUTM2BA6NNL0 878 aaPredicted RBP11.5□□□□□ -0.57
CNOT4-210ENST00000491203 NUTM2EB1AL46 878 aaPredicted RBP11.5□□□□□ -0.57
CNOT4-210ENST00000491203 GCP02774 474 aa11.5□□□□□ -0.57
CNOT4-210ENST00000491203 NUTM2AQ8IVF1 878 aaPredicted RBP11.5□□□□□ -0.57
CNOT4-210ENST00000491203 SLIT3O75094 1523 aa11.5□□□□□ -0.57
CNOT4-210ENST00000491203 USP54Q70EL1 1684 aa11.49□□□□□ -0.57
CNOT4-210ENST00000491203 TNNT2P45379 298 aaPredicted RBP11.49□□□□□ -0.57
CNOT4-210ENST00000491203 ANKRD26Q9UPS8 1709 aa11.49□□□□□ -0.57
CNOT4-210ENST00000491203 PCDHGA10Q9Y5H3 936 aa11.48□□□□□ -0.57
CNOT4-210ENST00000491203 PHRF1Q9P1Y6 1649 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms