RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 LRP8Q14114 963 aa6.98□□□□□ -1.29
DEPDC1-204ENST00000489862 BARGINQ6ZT62 677 aa6.98□□□□□ -1.29
DEPDC1-204ENST00000489862 ZNF395Q9H8N7 513 aaPredicted RBP6.98□□□□□ -1.29
DEPDC1-204ENST00000489862 CLCN1P35523 988 aa6.96□□□□□ -1.3
DEPDC1-204ENST00000489862 FOXD4L5Q5VV16 416 aaPredicted RBP6.96□□□□□ -1.3
DEPDC1-204ENST00000489862 GPCPD1Q9NPB8 672 aa6.96□□□□□ -1.3
DEPDC1-204ENST00000489862 FAM217BQ9NTX9 383 aaPredicted RBP6.96□□□□□ -1.3
DEPDC1-204ENST00000489862 CDV3Q9UKY7 258 aaKnown RBP6.96□□□□□ -1.3
DEPDC1-204ENST00000489862 MAGEB6P1A0A0J9YX57 407 aa6.95□□□□□ -1.3
DEPDC1-204ENST00000489862 GOLGA6L1Q8N7Z2 621 aa6.95□□□□□ -1.3
DEPDC1-204ENST00000489862 NKAPLQ5M9Q1 402 aa6.94□□□□□ -1.3
DEPDC1-204ENST00000489862 MCTP1Q6DN14 999 aa6.94□□□□□ -1.3
DEPDC1-204ENST00000489862 DYRK3O43781 588 aa6.93□□□□□ -1.3
DEPDC1-204ENST00000489862 PRICKLE2Q7Z3G6 844 aa6.93□□□□□ -1.3
DEPDC1-204ENST00000489862 DYRK1BQ9Y463 629 aa6.93□□□□□ -1.3
DEPDC1-204ENST00000489862 RHOQP17081 205 aa6.92□□□□□ -1.3
DEPDC1-204ENST00000489862 FZD5Q13467 585 aa6.92□□□□□ -1.3
DEPDC1-204ENST00000489862 KLRG1Q96E93 195 aa6.92□□□□□ -1.3
DEPDC1-204ENST00000489862 CFHR5Q9BXR6 569 aa6.92□□□□□ -1.3
DEPDC1-204ENST00000489862 KRTAP4-2Q9BYR5 136 aa6.92□□□□□ -1.3
DEPDC1-204ENST00000489862 PHF24Q9UPV7 400 aa6.92□□□□□ -1.3
DEPDC1-204ENST00000489862 NDUFV2P19404 249 aa6.91□□□□□ -1.3
DEPDC1-204ENST00000489862 SH3BP5LQ7L8J4 393 aa6.91□□□□□ -1.3
DEPDC1-204ENST00000489862 KCTD15Q96SI1 283 aaPredicted RBP6.91□□□□□ -1.3
DEPDC1-204ENST00000489862 ADH1AP07327 375 aa6.9□□□□□ -1.3
DEPDC1-204ENST00000489862 PTGIRP43119 386 aa6.9□□□□□ -1.3
DEPDC1-204ENST00000489862 C1orf229Q6ZS94 237 aaPredicted RBP6.9□□□□□ -1.3
DEPDC1-204ENST00000489862 SPIRE2Q8WWL2 714 aa6.9□□□□□ -1.3
DEPDC1-204ENST00000489862 MOXD2PA6NHM9 499 aa6.9□□□□□ -1.31
DEPDC1-204ENST00000489862 PRSS36Q5K4E3 855 aa6.9□□□□□ -1.31
DEPDC1-204ENST00000489862 GAS2L1Q99501 681 aaPredicted RBP6.9□□□□□ -1.31
DEPDC1-204ENST00000489862 CARD14Q9BXL6 1004 aa6.9□□□□□ -1.31
DEPDC1-204ENST00000489862 HYAL3O43820 417 aaPredicted RBP6.89□□□□□ -1.31
DEPDC1-204ENST00000489862 SSTR3P32745 418 aaPredicted RBP6.89□□□□□ -1.31
DEPDC1-204ENST00000489862 RNF144AP50876 292 aaPredicted RBP6.89□□□□□ -1.31
DEPDC1-204ENST00000489862 TTLL12Q14166 644 aaPredicted RBP6.89□□□□□ -1.31
DEPDC1-204ENST00000489862 ERFEQ4G0M1 354 aa6.89□□□□□ -1.31
DEPDC1-204ENST00000489862 GPKOWQ92917 476 aaPredicted RBP eCLIP6.89□□□□□ -1.31
DEPDC1-204ENST00000489862 HOXB4P17483 251 aaPredicted RBP6.88□□□□□ -1.31
DEPDC1-204ENST00000489862 AMHR2Q16671 573 aa6.88□□□□□ -1.31
DEPDC1-204ENST00000489862 NUCKS1Q9H1E3 243 aaKnown RBP6.88□□□□□ -1.31
DEPDC1-204ENST00000489862 TRIM52Q96A61 297 aa6.87□□□□□ -1.31
DEPDC1-204ENST00000489862 SLC10A4Q96EP9 437 aa6.87□□□□□ -1.31
DEPDC1-204ENST00000489862 ARID1BQ8NFD5 2236 aaPredicted RBP6.87□□□□□ -1.31
DEPDC1-204ENST00000489862 TRIM66O15016 1216 aa6.87□□□□□ -1.31
DEPDC1-204ENST00000489862 GJA5P36382 358 aa6.87□□□□□ -1.31
DEPDC1-204ENST00000489862 GIGYF2Q6Y7W6 1299 aaKnown RBP6.87□□□□□ -1.31
DEPDC1-204ENST00000489862 SLCO4C1Q6ZQN7 724 aa6.87□□□□□ -1.31
DEPDC1-204ENST00000489862 BTBD6Q96KE9 485 aa6.87□□□□□ -1.31
DEPDC1-204ENST00000489862 FMNL2Q96PY5 1086 aa6.87□□□□□ -1.31
DEPDC1-204ENST00000489862 TPSG1Q9NRR2 321 aa6.87□□□□□ -1.31
DEPDC1-204ENST00000489862 SPATA31C1P0DKV0 1188 aa6.86□□□□□ -1.31
DEPDC1-204ENST00000489862 LAMC2Q13753 1193 aa6.86□□□□□ -1.31
DEPDC1-204ENST00000489862 AK7Q96M32 723 aa6.86□□□□□ -1.31
DEPDC1-204ENST00000489862 COL17A1Q9UMD9 1497 aaPredicted RBP6.85□□□□□ -1.31
DEPDC1-204ENST00000489862 CFAP99D6REC4 459 aa6.85□□□□□ -1.31
DEPDC1-204ENST00000489862 SLC24A3Q9HC58 644 aa6.85□□□□□ -1.31
DEPDC1-204ENST00000489862 DGKGP49619 791 aa6.84□□□□□ -1.31
DEPDC1-204ENST00000489862 INTS6LQ5JSJ4 861 aaKnown RBP6.84□□□□□ -1.31
DEPDC1-204ENST00000489862 PARP9Q8IXQ6 854 aa6.84□□□□□ -1.31
DEPDC1-204ENST00000489862 GPC1P35052 558 aa6.83□□□□□ -1.32
DEPDC1-204ENST00000489862 ZBTB3Q9H5J0 574 aa6.83□□□□□ -1.32
DEPDC1-204ENST00000489862 APBA3O96018 575 aa6.82□□□□□ -1.32
DEPDC1-204ENST00000489862 BEGAINQ9BUH8 593 aa6.82□□□□□ -1.32
DEPDC1-204ENST00000489862 BMP4P12644 408 aa6.81□□□□□ -1.32
DEPDC1-204ENST00000489862 BCANQ96GW7 911 aa6.81□□□□□ -1.32
DEPDC1-204ENST00000489862 GGA1Q9UJY5 639 aa6.81□□□□□ -1.32
DEPDC1-204ENST00000489862 SPDYE3A6NKU9 549 aa6.8□□□□□ -1.32
DEPDC1-204ENST00000489862 F11P03951 625 aa6.8□□□□□ -1.32
DEPDC1-204ENST00000489862 PDE4DQ08499 809 aa6.8□□□□□ -1.32
DEPDC1-204ENST00000489862 ARHGAP9Q9BRR9 750 aa6.8□□□□□ -1.32
DEPDC1-204ENST00000489862 EPXP11678 715 aa6.79□□□□□ -1.32
DEPDC1-204ENST00000489862 DIXDC1Q155Q3 683 aa6.79□□□□□ -1.32
DEPDC1-204ENST00000489862 ZNF784Q8NCA9 323 aaPredicted RBP6.79□□□□□ -1.32
DEPDC1-204ENST00000489862 PER1O15534 1290 aaPredicted RBP6.79□□□□□ -1.32
DEPDC1-204ENST00000489862 WDR44Q5JSH3 913 aa6.79□□□□□ -1.32
DEPDC1-204ENST00000489862 H2AFB1P0C5Y9 115 aa6.78□□□□□ -1.32
DEPDC1-204ENST00000489862 H2AFB2P0C5Z0 115 aa6.78□□□□□ -1.32
DEPDC1-204ENST00000489862 PRRT3Q5FWE3 981 aa6.78□□□□□ -1.32
DEPDC1-204ENST00000489862 ZBTB33Q86T24 672 aa6.78□□□□□ -1.32
DEPDC1-204ENST00000489862 TBC1D2Q9BYX2 928 aa6.78□□□□□ -1.32
DEPDC1-204ENST00000489862 TMPRSS4Q9NRS4 437 aa6.78□□□□□ -1.32
DEPDC1-204ENST00000489862 ELNP15502 786 aa6.77□□□□□ -1.33
DEPDC1-204ENST00000489862 HRCP23327 699 aa6.77□□□□□ -1.33
DEPDC1-204ENST00000489862 POU4F2Q12837 409 aa6.77□□□□□ -1.33
DEPDC1-204ENST00000489862 SLC27A3Q5K4L6 730 aa6.77□□□□□ -1.33
DEPDC1-204ENST00000489862 KDF1Q8NAX2 398 aaPredicted RBP6.77□□□□□ -1.33
DEPDC1-204ENST00000489862 ADD1P35611 737 aaKnown RBP6.76□□□□□ -1.33
DEPDC1-204ENST00000489862 NBPF20Q3BBV1 942 aa6.76□□□□□ -1.33
DEPDC1-204ENST00000489862 PDXDC2PQ6P474 469 aa6.76□□□□□ -1.33
DEPDC1-204ENST00000489862 RNF135Q8IUD6 432 aa6.76□□□□□ -1.33
DEPDC1-204ENST00000489862 TSC1Q92574 1164 aa6.76□□□□□ -1.33
DEPDC1-204ENST00000489862 NACC1Q96RE7 527 aa6.76□□□□□ -1.33
DEPDC1-204ENST00000489862 PLVAPQ9BX97 442 aa6.76□□□□□ -1.33
DEPDC1-204ENST00000489862 TIMMDC1Q9NPL8 285 aa6.76□□□□□ -1.33
DEPDC1-204ENST00000489862 LILRA1O75019 489 aa6.76□□□□□ -1.33
DEPDC1-204ENST00000489862 RSBN1LQ6PCB5 846 aaPredicted RBP6.76□□□□□ -1.33
DEPDC1-204ENST00000489862 CHSY3Q70JA7 882 aa6.76□□□□□ -1.33
DEPDC1-204ENST00000489862 RIC3Q7Z5B4 369 aa6.76□□□□□ -1.33
DEPDC1-204ENST00000489862 LBRQ14739 615 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms