RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-213ENST00000485962 CDK12Q9NYV4 1490 aaPredicted RBP15.3■□□□□ 0.04
SGSM3-213ENST00000485962 CCDC9Q9Y3X0 531 aaKnown RBP15.3■□□□□ 0.04
SGSM3-213ENST00000485962 PIK3R4Q99570 1358 aa15.29■□□□□ 0.04
SGSM3-213ENST00000485962 ZNF692Q9BU19 519 aaPredicted RBP15.29■□□□□ 0.04
SGSM3-213ENST00000485962 CPSF1Q10570 1443 aaKnown RBP15.29■□□□□ 0.04
SGSM3-213ENST00000485962 XRCC6P12956 609 aaKnown RBP eCLIP15.29■□□□□ 0.044e-7■■■□□ 15.8
SGSM3-213ENST00000485962 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
SGSM3-213ENST00000485962 FAM43BQ6ZT52 329 aaPredicted RBP15.28■□□□□ 0.04
SGSM3-213ENST00000485962 CCDC61Q9Y6R9 512 aa15.28■□□□□ 0.04
SGSM3-213ENST00000485962 TNPO1Q92973 898 aaKnown RBP15.27■□□□□ 0.04
SGSM3-213ENST00000485962 SETD1AO15047 1707 aaKnown RBP15.27■□□□□ 0.03
SGSM3-213ENST00000485962 METP08581 1390 aa15.27■□□□□ 0.03
SGSM3-213ENST00000485962 PANK2Q9BZ23 570 aa15.27■□□□□ 0.03
SGSM3-213ENST00000485962 NCOA3Q9Y6Q9 1424 aa15.27■□□□□ 0.03
SGSM3-213ENST00000485962 AATKQ6ZMQ8 1374 aa15.26■□□□□ 0.03
SGSM3-213ENST00000485962 FSD2A1L4K1 749 aa15.26■□□□□ 0.03
SGSM3-213ENST00000485962 RBM42Q9BTD8 480 aaKnown RBP15.26■□□□□ 0.03
SGSM3-213ENST00000485962 ESF1Q9H501 851 aaKnown RBP15.26■□□□□ 0.03
SGSM3-213ENST00000485962 CDC45O75419 566 aa15.26■□□□□ 0.03
SGSM3-213ENST00000485962 GBP4Q96PP9 640 aa15.26■□□□□ 0.03
SGSM3-213ENST00000485962 KIF2CQ99661 725 aa15.26■□□□□ 0.03
SGSM3-213ENST00000485962 CPS1P31327 1500 aa15.26■□□□□ 0.03
SGSM3-213ENST00000485962 CD2BP2O95400 341 aaKnown RBP15.25■□□□□ 0.03
SGSM3-213ENST00000485962 TMEM132AQ24JP5 1023 aa15.25■□□□□ 0.03
SGSM3-213ENST00000485962 SULT6B1Q6IMI4 303 aa15.25■□□□□ 0.03
SGSM3-213ENST00000485962 AEBP1Q8IUX7 1158 aa15.25■□□□□ 0.03
SGSM3-213ENST00000485962 TMEM51Q9NW97 253 aa15.25■□□□□ 0.03
SGSM3-213ENST00000485962 ZHX1Q9UKY1 873 aaPredicted RBP15.25■□□□□ 0.03
SGSM3-213ENST00000485962 DIP2BQ9P265 1576 aa15.24■□□□□ 0.03
SGSM3-213ENST00000485962 K7ELQ4 463 aaPredicted RBP15.24■□□□□ 0.03
SGSM3-213ENST00000485962 DDIT3P35638 169 aa15.24■□□□□ 0.03
SGSM3-213ENST00000485962 KRT24Q2M2I5 525 aa15.24■□□□□ 0.03
SGSM3-213ENST00000485962 ZNF592Q92610 1267 aa15.24■□□□□ 0.03
SGSM3-213ENST00000485962 CIZ1Q9ULV3 898 aaPredicted RBP15.24■□□□□ 0.03
SGSM3-213ENST00000485962 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.24■□□□□ 0.03
SGSM3-213ENST00000485962 NUTM2FA1L443 756 aa15.24■□□□□ 0.03
SGSM3-213ENST00000485962 APBB1O00213 710 aa15.24■□□□□ 0.03
SGSM3-213ENST00000485962 RRAGDQ9NQL2 400 aaPredicted RBP15.24■□□□□ 0.03
SGSM3-213ENST00000485962 PATL2C9JE40 543 aaKnown RBP15.23■□□□□ 0.03
SGSM3-213ENST00000485962 SPATA31D1Q6ZQQ2 1576 aa15.23■□□□□ 0.03
SGSM3-213ENST00000485962 SOX12O15370 315 aa15.23■□□□□ 0.03
SGSM3-213ENST00000485962 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.23■□□□□ 0.03
SGSM3-213ENST00000485962 GSPT1P15170 499 aaKnown RBP15.22■□□□□ 0.03
SGSM3-213ENST00000485962 MRE11P49959 708 aa15.22■□□□□ 0.03
SGSM3-213ENST00000485962 MCM10Q7L590 875 aa15.22■□□□□ 0.03
SGSM3-213ENST00000485962 ITSN1Q15811 1721 aa15.22■□□□□ 0.03
SGSM3-213ENST00000485962 RAB3GAP1Q15042 981 aa15.22■□□□□ 0.03
SGSM3-213ENST00000485962 PLEKHM2Q8IWE5 1019 aa15.22■□□□□ 0.03
SGSM3-213ENST00000485962 MON2Q7Z3U7 1717 aa15.22■□□□□ 0.03
SGSM3-213ENST00000485962 EIF4A2Q14240 407 aaKnown RBP15.21■□□□□ 0.03
SGSM3-213ENST00000485962 C16orf71Q8IYS4 520 aaPredicted RBP15.21■□□□□ 0.03
SGSM3-213ENST00000485962 DCTPP1Q9H773 170 aa15.21■□□□□ 0.03
SGSM3-213ENST00000485962 NRXN3Q9Y4C0 1643 aa15.21■□□□□ 0.03
SGSM3-213ENST00000485962 GRPEL1Q9HAV7 217 aa15.21■□□□□ 0.02
SGSM3-213ENST00000485962 KNDC1Q76NI1 1749 aa15.21■□□□□ 0.02
SGSM3-213ENST00000485962 RGS22Q8NE09 1264 aa15.2■□□□□ 0.02
SGSM3-213ENST00000485962 AGLP35573 1532 aa15.2■□□□□ 0.02
SGSM3-213ENST00000485962 AK9Q5TCS8 1911 aa15.2■□□□□ 0.02
SGSM3-213ENST00000485962 HDGFP51858 240 aaKnown RBP15.19■□□□□ 0.02
SGSM3-213ENST00000485962 TTC22Q5TAA0 569 aa15.19■□□□□ 0.02
SGSM3-213ENST00000485962 INTS3Q68E01 1043 aaKnown RBP15.19■□□□□ 0.02
SGSM3-213ENST00000485962 GAS2L2Q8NHY3 880 aa15.19■□□□□ 0.02
SGSM3-213ENST00000485962 PRR36Q9H6K5 1346 aa15.19■□□□□ 0.02
SGSM3-213ENST00000485962 AKAP12Q02952 1782 aa15.19■□□□□ 0.02
SGSM3-213ENST00000485962 KIF24Q5T7B8 1368 aa15.18■□□□□ 0.02
SGSM3-213ENST00000485962 ANKRD44Q8N8A2 993 aa15.18■□□□□ 0.02
SGSM3-213ENST00000485962 SMARCA5O60264 1052 aaPredicted RBP15.18■□□□□ 0.02
SGSM3-213ENST00000485962 OTUD7AQ8TE49 926 aaPredicted RBP15.18■□□□□ 0.02
SGSM3-213ENST00000485962 C3P01024 1663 aa15.18■□□□□ 0.02
SGSM3-213ENST00000485962 MSH6P52701 1360 aa15.18■□□□□ 0.02
SGSM3-213ENST00000485962 SSFA2P28290 1259 aa15.18■□□□□ 0.02
SGSM3-213ENST00000485962 GOLGA6L22H0YM25 854 aa15.17■□□□□ 0.02
SGSM3-213ENST00000485962 HSP90AB2PQ58FF8 381 aa15.17■□□□□ 0.02
SGSM3-213ENST00000485962 REREQ9P2R6 1566 aa15.17■□□□□ 0.02
SGSM3-213ENST00000485962 TTC21BQ7Z4L5 1316 aa15.17■□□□□ 0.02
SGSM3-213ENST00000485962 SKOR2Q2VWA4 1001 aaPredicted RBP15.17■□□□□ 0.02
SGSM3-213ENST00000485962 CEP85Q6P2H3 762 aa15.17■□□□□ 0.02
SGSM3-213ENST00000485962 RPAP2Q8IXW5 612 aaPredicted RBP15.17■□□□□ 0.02
SGSM3-213ENST00000485962 CASC1Q6TDU7 716 aa15.16■□□□□ 0.02
SGSM3-213ENST00000485962 MEIS3Q99687 375 aa15.16■□□□□ 0.02
SGSM3-213ENST00000485962 MIS18AQ9NYP9 233 aa15.16■□□□□ 0.02
SGSM3-213ENST00000485962 ACEP12821 1306 aa15.16■□□□□ 0.02
SGSM3-213ENST00000485962 CHL1O00533 1208 aa15.16■□□□□ 0.02
SGSM3-213ENST00000485962 PTMSP20962 102 aa15.16■□□□□ 0.02
SGSM3-213ENST00000485962 CEBPAP49715 358 aaPredicted RBP15.16■□□□□ 0.02
SGSM3-213ENST00000485962 RABEP1Q15276 862 aa15.16■□□□□ 0.02
SGSM3-213ENST00000485962 SLC4A10Q6U841 1118 aa15.16■□□□□ 0.02
SGSM3-213ENST00000485962 SLC4A2P04920 1241 aa15.15■□□□□ 0.02
SGSM3-213ENST00000485962 ATP10DQ9P241 1426 aa15.15■□□□□ 0.02
SGSM3-213ENST00000485962 TICAM2Q86XR7 235 aa15.15■□□□□ 0.02
SGSM3-213ENST00000485962 ISY1Q9ULR0 285 aaKnown RBP15.15■□□□□ 0.02
SGSM3-213ENST00000485962 FAM193AP78312 1265 aa15.14■□□□□ 0.01
SGSM3-213ENST00000485962 PTPRCP08575 1304 aa15.14■□□□□ 0.01
SGSM3-213ENST00000485962 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
SGSM3-213ENST00000485962 SDSP20132 328 aa15.14■□□□□ 0.01
SGSM3-213ENST00000485962 SIRT1Q96EB6 747 aa15.14■□□□□ 0.01
SGSM3-213ENST00000485962 RTL1A6NKG5 1358 aa15.14■□□□□ 0.01
SGSM3-213ENST00000485962 ROBO2Q9HCK4 1378 aa15.14■□□□□ 0.01
SGSM3-213ENST00000485962 RGS12O14924 1447 aa15.14■□□□□ 0.01
SGSM3-213ENST00000485962 RTF1Q92541 710 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms