RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 FCHSD2O94868 740 aa11.57□□□□□ -0.56
USP16-206ENST00000485067 C8orf34Q49A92 452 aa11.57□□□□□ -0.56
USP16-206ENST00000485067 SPOCK2Q92563 424 aa11.57□□□□□ -0.56
USP16-206ENST00000485067 TNNQ9UQP3 1299 aa11.57□□□□□ -0.56
USP16-206ENST00000485067 CPSF1Q10570 1443 aaKnown RBP11.56□□□□□ -0.56
USP16-206ENST00000485067 VGLL3A8MV65 326 aa11.56□□□□□ -0.56
USP16-206ENST00000485067 ZNF428Q96B54 188 aa11.56□□□□□ -0.56
USP16-206ENST00000485067 EMILIN1Q9Y6C2 1016 aa11.56□□□□□ -0.56
USP16-206ENST00000485067 MON2Q7Z3U7 1717 aa11.56□□□□□ -0.56
USP16-206ENST00000485067 IGHDP01880 384 aa11.56□□□□□ -0.56
USP16-206ENST00000485067 FAM177A1Q8N128 213 aaPredicted RBP11.56□□□□□ -0.56
USP16-206ENST00000485067 BCL2L13Q9BXK5 485 aa11.56□□□□□ -0.56
USP16-206ENST00000485067 SLC24A3Q9HC58 644 aa11.56□□□□□ -0.56
USP16-206ENST00000485067 POLKQ9UBT6 870 aa11.56□□□□□ -0.56
USP16-206ENST00000485067 TRIM35Q9UPQ4 493 aa11.56□□□□□ -0.56
USP16-206ENST00000485067 FER1L4A9Z1Z3 1794 aa11.55□□□□□ -0.56
USP16-206ENST00000485067 ZKSCAN2Q63HK3 967 aa11.55□□□□□ -0.56
USP16-206ENST00000485067 AKAP12Q02952 1782 aa11.55□□□□□ -0.56
USP16-206ENST00000485067 ITSN1Q15811 1721 aa11.54□□□□□ -0.56
USP16-206ENST00000485067 TSR2Q969E8 191 aaKnown RBP11.54□□□□□ -0.56
USP16-206ENST00000485067 AATKQ6ZMQ8 1374 aa11.54□□□□□ -0.56
USP16-206ENST00000485067 LRRC7Q96NW7 1537 aa11.54□□□□□ -0.56
USP16-206ENST00000485067 RIPK4P57078 832 aa11.53□□□□□ -0.56
USP16-206ENST00000485067 MVPQ14764 893 aaKnown RBP11.53□□□□□ -0.56
USP16-206ENST00000485067 RRS1Q15050 365 aaKnown RBP11.53□□□□□ -0.56
USP16-206ENST00000485067 RWDD1Q9H446 243 aaPredicted RBP11.53□□□□□ -0.56
USP16-206ENST00000485067 CDK12Q9NYV4 1490 aaPredicted RBP11.53□□□□□ -0.56
USP16-206ENST00000485067 SMAP1Q8IYB5 467 aaPredicted RBP11.53□□□□□ -0.56
USP16-206ENST00000485067 PLEKHG1Q9ULL1 1385 aa11.53□□□□□ -0.56
USP16-206ENST00000485067 HMOX1P09601 288 aa11.52□□□□□ -0.56
USP16-206ENST00000485067 DZIP1LQ8IYY4 767 aaKnown RBP11.52□□□□□ -0.56
USP16-206ENST00000485067 RLBP1P12271 317 aa11.52□□□□□ -0.57
USP16-206ENST00000485067 EXOSC9Q06265 439 aaKnown RBP11.52□□□□□ -0.57
USP16-206ENST00000485067 CCDC61Q9Y6R9 512 aa11.52□□□□□ -0.57
USP16-206ENST00000485067 SMC4Q9NTJ3 1288 aa11.51□□□□□ -0.57
USP16-206ENST00000485067 AMOTL2Q9Y2J4 779 aa11.51□□□□□ -0.57
USP16-206ENST00000485067 ALDH1L2Q3SY69 923 aa11.51□□□□□ -0.57
USP16-206ENST00000485067 PHACTR3Q96KR7 559 aa11.51□□□□□ -0.57
USP16-206ENST00000485067 KIF16BQ96L93 1317 aa11.5□□□□□ -0.57
USP16-206ENST00000485067 IPO8O15397 1037 aaKnown RBP11.5□□□□□ -0.57
USP16-206ENST00000485067 CEP120Q8N960 986 aa11.5□□□□□ -0.57
USP16-206ENST00000485067 TRIM44Q96DX7 344 aaPredicted RBP11.5□□□□□ -0.57
USP16-206ENST00000485067 ZNF219Q9P2Y4 722 aaPredicted RBP11.5□□□□□ -0.57
USP16-206ENST00000485067 DDX19BQ9UMR2 479 aa11.5□□□□□ -0.57
USP16-206ENST00000485067 NBPF20Q3BBV1 942 aa11.49□□□□□ -0.57
USP16-206ENST00000485067 RBM33Q96EV2 1170 aaKnown RBP11.49□□□□□ -0.57
USP16-206ENST00000485067 PCDHB15Q9Y5E8 787 aa11.49□□□□□ -0.57
USP16-206ENST00000485067 PRKAR2BP31323 418 aa11.49□□□□□ -0.57
USP16-206ENST00000485067 UTP14CQ5TAP6 766 aaKnown RBP11.49□□□□□ -0.57
USP16-206ENST00000485067 ATF7IPQ6VMQ6 1270 aa11.49□□□□□ -0.57
USP16-206ENST00000485067 THUMPD2Q9BTF0 503 aaKnown RBP11.49□□□□□ -0.57
USP16-206ENST00000485067 ACEP12821 1306 aa11.49□□□□□ -0.57
USP16-206ENST00000485067 ARHGAP23Q9P227 1491 aa11.49□□□□□ -0.57
USP16-206ENST00000485067 RGPD8O14715 1765 aaPredicted RBP11.49□□□□□ -0.57
USP16-206ENST00000485067 NFE2L2Q16236 605 aa11.48□□□□□ -0.57
USP16-206ENST00000485067 SSH1Q8WYL5 1049 aa11.48□□□□□ -0.57
USP16-206ENST00000485067 COG3Q96JB2 828 aa11.48□□□□□ -0.57
USP16-206ENST00000485067 EID1Q9Y6B2 187 aa11.48□□□□□ -0.57
USP16-206ENST00000485067 TOPAZ1Q8N9V7 1692 aa11.48□□□□□ -0.57
USP16-206ENST00000485067 SLIT1O75093 1534 aa11.48□□□□□ -0.57
USP16-206ENST00000485067 GTPBP6O43824 516 aaPredicted RBP11.47□□□□□ -0.57
USP16-206ENST00000485067 TRIM27P14373 513 aa11.47□□□□□ -0.57
USP16-206ENST00000485067 IL13P35225 146 aa11.47□□□□□ -0.57
USP16-206ENST00000485067 LMOD3Q0VAK6 560 aa11.47□□□□□ -0.57
USP16-206ENST00000485067 HDAC1Q13547 482 aaPredicted RBP11.47□□□□□ -0.57
USP16-206ENST00000485067 CARD10Q9BWT7 1032 aa11.47□□□□□ -0.57
USP16-206ENST00000485067 SH3BP1Q9Y3L3 701 aa11.47□□□□□ -0.57
USP16-206ENST00000485067 POTEDQ86YR6 584 aa11.47□□□□□ -0.57
USP16-206ENST00000485067 EGFL6Q8IUX8 553 aa11.47□□□□□ -0.57
USP16-206ENST00000485067 NRKQ7Z2Y5 1582 aa11.46□□□□□ -0.57
USP16-206ENST00000485067 RIMS1Q86UR5 1692 aaKnown RBP11.46□□□□□ -0.57
USP16-206ENST00000485067 KDM4AO75164 1064 aa11.46□□□□□ -0.57
USP16-206ENST00000485067 DLG5Q8TDM6 1919 aa11.46□□□□□ -0.58
USP16-206ENST00000485067 KCNA6P17658 529 aa11.46□□□□□ -0.58
USP16-206ENST00000485067 GNAI1P63096 354 aa11.46□□□□□ -0.58
USP16-206ENST00000485067 NBPF11Q86T75 865 aa11.46□□□□□ -0.58
USP16-206ENST00000485067 IFT57Q9NWB7 429 aa11.46□□□□□ -0.58
USP16-206ENST00000485067 NOB1Q9ULX3 412 aaKnown RBP11.46□□□□□ -0.58
USP16-206ENST00000485067 PDZRN3Q9UPQ7 1066 aa11.46□□□□□ -0.58
USP16-206ENST00000485067 TTC21BQ7Z4L5 1316 aa11.45□□□□□ -0.58
USP16-206ENST00000485067 TMTC2Q8N394 836 aa11.45□□□□□ -0.58
USP16-206ENST00000485067 PPP4R3BQ5MIZ7 849 aa11.44□□□□□ -0.58
USP16-206ENST00000485067 AEBP1Q8IUX7 1158 aa11.44□□□□□ -0.58
USP16-206ENST00000485067 THEMISQ8N1K5 641 aaPredicted RBP11.44□□□□□ -0.58
USP16-206ENST00000485067 ZC3H15Q8WU90 426 aaKnown RBP11.44□□□□□ -0.58
USP16-206ENST00000485067 ARHGAP45Q92619 1136 aa11.44□□□□□ -0.58
USP16-206ENST00000485067 TTC36A6NLP5 189 aa11.44□□□□□ -0.58
USP16-206ENST00000485067 APBB1O00213 710 aa11.44□□□□□ -0.58
USP16-206ENST00000485067 HSP90AB4PQ58FF6 505 aa11.44□□□□□ -0.58
USP16-206ENST00000485067 ITPRIPQ8IWB1 547 aa11.44□□□□□ -0.58
USP16-206ENST00000485067 UPF2Q9HAU5 1272 aaKnown RBP11.44□□□□□ -0.58
USP16-206ENST00000485067 TBX22Q9Y458 520 aa11.44□□□□□ -0.58
USP16-206ENST00000485067 NALCNQ8IZF0 1738 aa11.44□□□□□ -0.58
USP16-206ENST00000485067 PLEKHG3A1L390 1219 aa11.43□□□□□ -0.58
USP16-206ENST00000485067 LAS1LQ9Y4W2 734 aaKnown RBP11.43□□□□□ -0.58
USP16-206ENST00000485067 USP6P35125 1406 aa11.43□□□□□ -0.58
USP16-206ENST00000485067 FAM83GA6ND36 823 aa11.43□□□□□ -0.58
USP16-206ENST00000485067 ZNF853P0CG23 659 aa11.43□□□□□ -0.58
USP16-206ENST00000485067 HS6ST3Q8IZP7 471 aa11.43□□□□□ -0.58
USP16-206ENST00000485067 KCNV2Q8TDN2 545 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms